Basic Information

Gene Symbol
ncor1
Assembly
GCA_014462685.1
Location
JAACXV010013573.1:44807-88186[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-07 0.00012 22.4 0.0 4 43 433 473 431 475 0.98
2 2 8.6e-06 0.0097 16.3 0.1 3 42 907 945 906 948 0.96

Sequence Information

Coding Sequence
ATGCTAATACAATCTGCCTTTGTTGATCTCAGCGTCTCTAGACCAAACCACAGTGCCCAGGCTACCGCCCATGTATCGGCGGAGTTGTACAAACCGTCGAGGTCGCCGCTATCCAGCACCAGATGTCCTTATCCCCCGTCCCCCCAGCTGCAGTCTGCCCCCACGAACATCACTCAAGTGCAGGTATCTCAGAGGTATCCCCCACAAGGGCCGACCACCTCCATCGCGGCCACCGCCGCTCCTCCTCTCCTTACAGCTTATCACCGTCCGCAGCCCGACTACCGTCATGCCAATCGAATATCTCTGTTGCACCCAGAGTATGGACCTGGCGGTCGAAGGGACACATCCGGAGGGACAATGGGACAGCCCCCTCCAACGCAGTCTGGTGAACAACCGCTGAAGAAGATCAGATTAACGGACAAGGAAGTACAACCGTTGAGGATTGATACCCGACCGGGAACTTATAACCCACAAGTGGAAGCTATCTCGCCCACATTTCCCGAGCAAGTCTCCCAAGAAGACCAAGCATTCAAAACAACGAAAGATGAACTGATCCAACAGATCAGTAAAGTGGACAGGGAGATCTTGAAGGTGGAACAGCAAATCGTCATTCTAAAAAAGAAACAGGCCGAGTTGGAGGAGGTGGCGAACAAGCCCAGCGTTAAATCGGAAGTGGAAGAAGATTCACAACCGAAACATCAGAGTTTACCGCAGaaaatcTATGCGGAAAACCGGAAGAAAGCGCAGAGCGCTCATGCGCAATTAGATTCGTTGGGTCCTAAAGTGCAAAGGCCCCTGTACAATCAACCGACTGATACTACGGTGTTCCATGAAAATAACCGACGAAATGTGATGAATAAAAAACgcttattagaatattttaagaagAAACACAGTAATAAGTATGCAAGaaaCAATCAATTAACAGGGACATACAGTAAATTAATGCAAGAATGGCTGCGGAAGGTCGATAAAGTCGAATCTAGCACGAAACGGAAAGTCAAAGAAGCGAAGAATAGAGAATTCTTCGAAAAAGTATTCCCCGAGTTAAGAAAACAACGGGAAGATAAAGAAAGATTCAACAGGGTAGGTGCTCGAGTCAAATCAGAAGCGGACATGGAAGAAATCATGGATAATCTTCAAGAACAAGCGCTAGAAGATAAGAAAATGCGAAGTTACGCAGTCATACCTCCTATTCTTATGGATCCGAAAGAACgaagaattaaatatacaaataataataattttattgaagacATGGAACCAGTATATAAGAGTCGACAGTACTTGAACATATGGACTGCCAGCGAAAAAGAGacattcaaagaaaaatatctaCAACACCCCAAGAACTTCTATCAAATTAGTCAAGCGTTAGGCGAACGAAAATCAGTATCTGAATGCGTTCAATACTATTATTTGAGTAAGAAAACAGAGAATTACAAGCAACTGTTGAGGAAAAATAAAAGAGACAAGTTGAGGGAGCGTTTAAGATCGACAAGAAATAACCCTCAGAAGGTCAATAATAGTGCCAACTTACCGGTGATCGACAATTTATCAAcaggaGTAACTACGAGATTACAGCGTGAACAGCAGCAGCGAACAGGGGGTGCAGCTCGAACGGCCGAAGCGTCAACCGCAGCGGCAGCGGCAGTTACTGCAGATGCAGCTAATTCAGGAAATTCGTCGTCGCCACCAATACCACTAGCGACAACAGCCACACCTAGTCCACTGAACGCTGGGGGAACTACCACCACAAGCACCACCTCTAGTGCTAGTGGAACGTCAACCAGTACGACAACTACAGCGTCAGGCGATTGGACATCCACCAACAGTTCTACGACGCAGGTGTCATCAAGTTCCGCCCAATCTACAACTTCAAATACGACGGTTTCATCTGTGATTTCAACATCAGCTGCGTCCTCTTTAGCAACGTCAAGTACAGCCAGTACAACCACGACCTCCTCCAGCATATCAACATCGTCCACAACGCCTATGGATACAAACACAACGCAAAATACCCTAAAAGATAACAAAAGCGTTGTGAAGTTTAATGACTTCAATTCCTTTGAAGATTATAACAATAGgaAAAAGATTTTTGGAGACAGTACATCTTCAGGAACCGTATCCACTGGAGAGAAGGAAGGAGAAACGAATTTGAACGCGGAACAAAAGGATCAAGAAGGTCATTTCTCCAAAGACGACGCCGAAAATACCACAGGCACTAGCGAGGCTAATTGcgACAATGCTCTGTCTTCATCCGTaccagaaaacaaaaagaagaaagaGCGGAGAAAAGACAAGGAAAACAACGTTGAAACTAGTGATGAAGAAGCCGCTTCAATACAAgataAAACCATGCAAGGTGTCTGCATTGTGTGCAATGCCCAGCTGGGTCCTCAACTACACTCCAGGCCACTTCAACCAAGCCAAGCATCCCAATACGGTCTACGAGAGGATGACGTACCTCTCAATTCTCGCGTCTGTAACACTTGTCGTTGTAAATGCGTCCGATCTCGCTACACCCACTGTCCGTTGCCCACTTGCCCTAATGCCAGGGGACGAGTCAAGAGATTGCGATCGTTTCCGTATCGCTTGCAAGATCTGCCCGCTGAGGTGCGAGACCCGATCTTGGCCGAGTTTCGCATACCCAGCGGCGTAACCAAATGCTGTTCCGTCTGTTTCAACCGAATCCAGAGGCGACTAGGTCCAGTCGAGGAATGGCCCGAGGAGGAAGTCACCCAATTGAAGGCGGCGCTCACAGAACTGGCCGCCAACTGGCAGCTAATTGGAGAGAGGCTCAACAAGTCGGCGCATCAGGTGCGCAGTTTCTACGCAGCCAATCAAAAGCGTTTAAATCTGGAGAATTGTCTAGGAGACCGTAAGCCTACATTGACGGATGAGGAAGAATCGGGATCCAGTACCTCTAGCTGTGAGGAACCGATGAGAGAACAGGAACGACATTCCAGCGATACCGCCAGTGCTGCCGAAAGTCCACCGGTGCTGCAGGGCACTAGTCAGAACGCTGTCAAGAAAGAAGATTACGATTCCAGTGCGACCGAAACGGCAGACGAAGCCCAAACTCCCGATCACTACCAATCCGCCACCATCACGCCAGTGGCCAACGATTATCAAGCTTGTTCCGCTCCCACACCTCTAAGCGTGAAAGAATTAGTAATGAACGTTATCGAAATATCTCTTAACAAAAATTCTGGTGTTCAGCAACCAGGGCAAGTGCAAGGTTCAGGCATGGCTCCGACCATTTCTTCGATCTTAAATAACGACTCAAACGAGGTGACCATTGTGAGCGAATACAACTTAAACAGCATCCCCAATAGATCTCAGCCGCCGCTTCAGCCCCGGGCTGATATTAGCCTGACGAAGTTGGCGAACACCATTGGGGCTACGATAACGCCGGTCTCGGGACCCATACGTTCTCAGCCTCAACCCGAACCCATCCAAAGCTCCCGCGATGATTTGGTGGTCGTACAGGTACCAGATACTAGAGATAGTATTCCGGAGACCCTGGATCTGAGCATCAAGAAACCCAGAGAGCCCATACCGCCCTCACACCCCAAACACCCGCCGTCGAATATACATCGGTCGGAGCCATCATACATTTACCACCAGGAGAGAAAGAGCCCCGCCTACATTCGTACTTCGCAGGTGAAACTACCTAGTCCTCAGCCGGCTAATCCAAAGACGGGCTCAATTACTTTGGGAACGCCCATCGTTAATACGCCGACCCGCTATGATGGTCTTCTGAGGCAAATACCCGATGCCAAGATGGGTTCGATCACCAAAGGGACACCCATTCACACGTCGCATAGCTTGCAGGACAAGCGTGTTTACGATTATTTCACTAAACAAGGTCGACTGCAGTCTCAGCAAAACATCGCCCCTCAGCCGCAACCGTATCATTATCCCCAGAGATCCGCCTACGAACAACAGATGTCGGTTAGCTCGCAAATGTCTTCTCGACAAATCATCATGGATGATTATATAACCTCTCAACAGATGCACAGCAATAGGAGACCAGAAAAGCCGCATTACTATCCGGCCAACAGTCCGCACAGGACCCCGCCTCCGCCAAATCAACAGAGACAAGGCGTCATTCAAAGACATACCAGACCCCAACTTCAACCTTTACCAGGCCATGAAGCTCTCACTTCTTTAGTGGATATCGCTGTTCAGCAACCGAGTTTACCCGTTCCCACAGCCCCCCACGAAGGTCTGGGGAAAACTATCGCGGATAACATCATGGAACAACCTCATCGGTACCAGATTATCCAGCAGCAGATGCGACAAcaacagcagcagcagcagAGAATCGATGAACACAGAAGAGCTTAtcatcaacaacaacaacagcaACAGGTTCGGCCTCAGCCCAGATCAGATCCCAACACTATGACAGCAGCTAGTCTGATAGACGCTATTATAACGCATCAGATCAATCAAACGGCTGAAGGGGGGCGAGGGGATGTCGTATCCAATTCCAGGGAGACTCGAGCTGGTGACTTGCTGTTCCAAAGTTTTCAACGTGATCCTCCGGTCAGCCAAGAAAACAACGGAGTGAGACCGCCGTCGGTTATAAGTTTAGACTTGGACTCCGATGTGATTAACAAAAATCTAACCGTGAAGGAGCTGACAGACACGGTGATCAGTCACGATTTCAGTACCCGTCCGGCGGCGTATTACCATCTCCAGGAGAACGTAAATGAGCAGTGGAAGCGACGCCTACATcagcaacaacaacaaaaagagGAGAGCAAGCGATCAGCCACGCCTCAGCAGTCGGCACCACAACAGGACGAGCGACAGATCATCAGGATCGCGCAACCTCAAAAATACCATCACGAACCAGTGTCCCCGCCAGAGAATAACCACTGGTCAGAGCAGAACTTCCGGCGCTATCAGCAGCCTCAGTCGCACATGTCCCCGCTCGACTACGTGAAGAACCGAATCGTGGAAGTGATGCGCACTGAAGACGATAAGAAAGACGTCCAGGACGCGCACGTTCCCGAGAAGGACCGAAGCGATAGTCCTGGGGAGATGGTGATCGATGAGGAGAAGCACGATAACGATTTCTCGAACCAACAGCAACAGGAACAGCAGCACCAGCAGGCTCGCGCCGCTCAACACCCCCAACCGCTACAAGGTGCGTACTCTTACTCGTATGTTCATAAGGACACTGCCAACGACAGCTCGAGAAGCAGCGAACCGAAGCCTCTCCTCTCTGCCCAATACGAACCGTTGAGCGATGAAGATTAA
Protein Sequence
MLIQSAFVDLSVSRPNHSAQATAHVSAELYKPSRSPLSSTRCPYPPSPQLQSAPTNITQVQVSQRYPPQGPTTSIAATAAPPLLTAYHRPQPDYRHANRISLLHPEYGPGGRRDTSGGTMGQPPPTQSGEQPLKKIRLTDKEVQPLRIDTRPGTYNPQVEAISPTFPEQVSQEDQAFKTTKDELIQQISKVDREILKVEQQIVILKKKQAELEEVANKPSVKSEVEEDSQPKHQSLPQKIYAENRKKAQSAHAQLDSLGPKVQRPLYNQPTDTTVFHENNRRNVMNKKRLLEYFKKKHSNKYARNNQLTGTYSKLMQEWLRKVDKVESSTKRKVKEAKNREFFEKVFPELRKQREDKERFNRVGARVKSEADMEEIMDNLQEQALEDKKMRSYAVIPPILMDPKERRIKYTNNNNFIEDMEPVYKSRQYLNIWTASEKETFKEKYLQHPKNFYQISQALGERKSVSECVQYYYLSKKTENYKQLLRKNKRDKLRERLRSTRNNPQKVNNSANLPVIDNLSTGVTTRLQREQQQRTGGAARTAEASTAAAAAVTADAANSGNSSSPPIPLATTATPSPLNAGGTTTTSTTSSASGTSTSTTTTASGDWTSTNSSTTQVSSSSAQSTTSNTTVSSVISTSAASSLATSSTASTTTTSSSISTSSTTPMDTNTTQNTLKDNKSVVKFNDFNSFEDYNNRKKIFGDSTSSGTVSTGEKEGETNLNAEQKDQEGHFSKDDAENTTGTSEANCDNALSSSVPENKKKKERRKDKENNVETSDEEAASIQDKTMQGVCIVCNAQLGPQLHSRPLQPSQASQYGLREDDVPLNSRVCNTCRCKCVRSRYTHCPLPTCPNARGRVKRLRSFPYRLQDLPAEVRDPILAEFRIPSGVTKCCSVCFNRIQRRLGPVEEWPEEEVTQLKAALTELAANWQLIGERLNKSAHQVRSFYAANQKRLNLENCLGDRKPTLTDEEESGSSTSSCEEPMREQERHSSDTASAAESPPVLQGTSQNAVKKEDYDSSATETADEAQTPDHYQSATITPVANDYQACSAPTPLSVKELVMNVIEISLNKNSGVQQPGQVQGSGMAPTISSILNNDSNEVTIVSEYNLNSIPNRSQPPLQPRADISLTKLANTIGATITPVSGPIRSQPQPEPIQSSRDDLVVVQVPDTRDSIPETLDLSIKKPREPIPPSHPKHPPSNIHRSEPSYIYHQERKSPAYIRTSQVKLPSPQPANPKTGSITLGTPIVNTPTRYDGLLRQIPDAKMGSITKGTPIHTSHSLQDKRVYDYFTKQGRLQSQQNIAPQPQPYHYPQRSAYEQQMSVSSQMSSRQIIMDDYITSQQMHSNRRPEKPHYYPANSPHRTPPPPNQQRQGVIQRHTRPQLQPLPGHEALTSLVDIAVQQPSLPVPTAPHEGLGKTIADNIMEQPHRYQIIQQQMRQQQQQQQRIDEHRRAYHQQQQQQQVRPQPRSDPNTMTAASLIDAIITHQINQTAEGGRGDVVSNSRETRAGDLLFQSFQRDPPVSQENNGVRPPSVISLDLDSDVINKNLTVKELTDTVISHDFSTRPAAYYHLQENVNEQWKRRLHQQQQQKEESKRSATPQQSAPQQDERQIIRIAQPQKYHHEPVSPPENNHWSEQNFRRYQQPQSHMSPLDYVKNRIVEVMRTEDDKKDVQDAHVPEKDRSDSPGEMVIDEEKHDNDFSNQQQQEQQHQQARAAQHPQPLQGAYSYSYVHKDTANDSSRSSEPKPLLSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01351648;
90% Identity
-
80% Identity
-