Rfer011459.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- F54F2.9
- Assembly
- GCA_014462685.1
- Location
- JAACXV010000377.1:887679-889826[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-07 0.00014 22.3 0.0 2 38 275 314 274 321 0.87 2 2 1.7e-08 2e-05 25.0 0.1 3 43 357 401 356 403 0.91
Sequence Information
- Coding Sequence
- atgaaatcatATATAGTTTATGTAGTATTATTAATCCTTATTCATGGCCAATGTTGTCAAGCTTGGGATTCTGAACAACTAGAAGTATTTGATATTGTAGACGAAGTGAAAGAAAACTTTTATgaagtattaaatatatctaaaGATGCCTCTAGCTCAGAAATTAGGTCTGCATTTCGTATATTATCCTTAAAATTACATCCTGATAAGAATCTGGACATCGATACTTCTGAACAGTTTCGAAACTTAGTATCAATATATGAAGTACTTAAAAGtccaacaaaaagaaaatattatgatgaGGTGCTTGTTAATGGTTTACCCAATTGGAGATCAGCTGTATATTATTACCGTTATGTTCGAAAGATGGGTATGGCTGAAACATGtgttatattgtttgttattatcACTATTGGTCAGTACTTAGTAAATTGGGCTGCTTACTTGGACAAAAAATTTACAATTcagGAAAATCTTAAACGTAAGAAACAGCCAAGAAAAGGTAAAGCCCTTGATGAtgatgttataatttatataccaaAACCGACAATATTTGATACTTTACCATTCCAAATACCCAAGTTAATATGGATTTCAGTAATTTCAATACCATCAACCTTAGGGTACTTTAAAACTGCTGTTGCCCAACAGTTAGAAGAAGCGAAAAAAGTTCCAGTTGAACCAGAACCTGACCGGGTAAAAATTAAAACCgttagaaaaagaaataaatttgttgttCCTGAAGGACCTAATTTTGAAACAGCAATAGGAACTTCTAATGAAAATTGTCAAGAAAGTTCACCTCCACCACCTGTATCTGGAGGTTTGTGGACAGATGATGATTTAGACGAATTGATTCGCCTGGTAAAAAAATACCCTCAGGGTTCATCAAAAAGATGGGAGAATATTGCCGACGCTTTGGGACGATCGGTAGCAGAAGTCACTTACATGGCTAATAAGATGAAAGAGGACGGATATAGACTACCATCAGAGAGGGAGGAAGAACCTGctcaaataaaagtaaaacagaAAACGAAAAAAGAAGTTGATACTAGTGAAAACATTACTAAGTGGAGTCAGATACAACAAAAAGCTCTTGAAGAAGCTCTTACTAAATATCCAAAAGGTTGTGCGGATAGATGGGATCGGATAGCTGACAATGTTCCTGATAAAACGAAGGAAGAGTGTATGATGAGGTTTAAGTTTTTAGCAGAATctttaaaaaagcaaaaagaaTCATCCAATGTTGAATTAAGCCAAATAGAAGCGACAGCAGGCAATGAACTGTCGTCGGAAATTTAA
- Protein Sequence
- MKSYIVYVVLLILIHGQCCQAWDSEQLEVFDIVDEVKENFYEVLNISKDASSSEIRSAFRILSLKLHPDKNLDIDTSEQFRNLVSIYEVLKSPTKRKYYDEVLVNGLPNWRSAVYYYRYVRKMGMAETCVILFVIITIGQYLVNWAAYLDKKFTIQENLKRKKQPRKGKALDDDVIIYIPKPTIFDTLPFQIPKLIWISVISIPSTLGYFKTAVAQQLEEAKKVPVEPEPDRVKIKTVRKRNKFVVPEGPNFETAIGTSNENCQESSPPPPVSGGLWTDDDLDELIRLVKKYPQGSSKRWENIADALGRSVAEVTYMANKMKEDGYRLPSEREEEPAQIKVKQKTKKEVDTSENITKWSQIQQKALEEALTKYPKGCADRWDRIADNVPDKTKEECMMRFKFLAESLKKQKESSNVELSQIEATAGNELSSEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00376263;
- 90% Identity
- -
- 80% Identity
- -