Rfer018366.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- MYB3R1
- Assembly
- GCA_014462685.1
- Location
- JAACXV010013378.1:7927-14040[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1 1.2e+03 0.1 0.2 22 45 250 275 246 276 0.80 2 5 1.5e-08 1.7e-05 25.1 0.3 1 45 282 329 282 330 0.96 3 5 1.3e-06 0.0015 18.9 0.0 2 43 335 380 334 383 0.93 4 5 3.7e-08 4.2e-05 23.9 0.0 1 46 391 436 391 436 0.97 5 5 8.2e-11 9.3e-08 32.4 0.0 2 42 443 483 442 485 0.95
Sequence Information
- Coding Sequence
- ATGAATGAAGCagaagatttaaaagaaattgaactattaattgaaaaacaaaaattagagGAGCagGAGTGCGATGAAGTAGAATATTCAGAATTTATAGACGATTATGATAGTGATGAATTTATAGGAGAGAATGAAGACTATGAAATACCTGATTATCAAAAGCAAGATGTATCAAAACTACATACAAGTACTCCCAGCTCTATATTAACAGTTAATGAGAAGAAGATCGTTGATATGTGTAAAGATCCAGACCTGAGAGAGCTGCTAATTCTAAATAGGCAAAAGAACATGCAACTTATGCAATTTTTTAAAGTGATTAAAGACTTATTAATCGAATGCCAAACTAATATTATGCAAAAAGATAATCAAATTAAGGCTAAAAATAACGACAAGcgcaataattataaaatatggagAATCGGCAGGCCGTATTTTAAGTCTGCAGATAACTTTCCTTGCCCAAGAAATGAAGATACTATGCAGAAGCATCAAAAAGGGGAATTAATGTATTATGACATGATTCCAAGTATTAAATGGTTTAACAATGATGCAAAAAGGTTGATGGCAGGAGTTGCATTCATATTCAAAGTTATAAGGGAGGAACAACTAACGAAAGAAATTTCTGCTATGGAACAATCAGATAATGTGAatcatagaaaattaaaaatgcttaAGCAAAGTGTGGATGATATCAGAAATTCTTCTGAGGTGGTGTATCCACCTAGGAATTTTGACAAATCCATAGACTGGAATAGgatttcacataattttttatgtaataaGTACTCACCTGAAGACTGTGAAATATTCTGGAATATCTACTTACATCCACACATAAATAAAGGCCAGTGGTCTGGTGATGAAAATACAAAACTCAAATCCATAGTCTTAAGACATCATCACCAAAACTGGGATGCCATCGCTAAAGAATTGGGTAACAACAGGACTGGATTTGTATCGTGTATACATTATTATCGAAATGTCGAACCACCAAAAGAAGGTAGATTTAAGCCAAGTGAAGACAAGCTTCTGTGTGATTTGGTTAAAGTTTTTAAACAAGGGAGCTATATACCATGGACAAGAATTGCCTATCACTTCAAAAATAGAACTAGAGGACAACTATGTTACAGATACAAATATTTCTTGAGTTGTAAGGATGATATTGTAAAAGGGAAATTTACACCAGCTGAAGATGTactattaatgattttagttGATAGatttgggACTCGTTTTTCGAAATGCCAGGAATATTTCACCAACAGATGTTCTGTGCAGCTCAAAGCCAGATACACCACTAATTTAAAAACCGCCATAAAAAGAGCTTCCTTTACTGTCGAAGAAGATCAACGAATCATAGACTATGTTGAGAAAAATGGACCGTCCCAATGGGTAACCCTGGCAAGGACGCTTAGTCGTACGGGTGGTCAAATAAGGCAAAGATACAAAATATTGAACGATTTCTTCAAAGGACATCCGGGCGCATCACTTGAAGAGGCGCCAAGGAGGAAAGGGACGGTACTATCATTTGATAAAGAATTCGATTTTCTCAGATGCATCGCGAATGTATACAAGAATCACAGCAAAATCCCTACATTAAAAGAAATAGAGAAAGTATTATTGAacagtcaaaataaaatatataataacaaattgttGGCAGAACCACAAAATCACAAACAAATCGACAATCTTCTAACAAACTTCTTCTGCGCCAAGATGAACAACGAAAAGACAAATCAAGCCAATATAAATCTGGCAGTAATTGCTGTTAGACAAGTTTTATCCATACTGCAAGCCGAACTTTGTATACCTAAAGAATTGAAAGACTTCCCGGAGCTCAATGGCGTCGACCAtcgtattttaaaatcattgacCGCCAGAGAACCCAAGAATGAAGATGGAGCTTGTGAAATAAAACGGGACGGAAACAAGATAAATTCACTTCTACCGCCAAATTTATTCAATGTGGTAGGGTTACTGAATCTGGTAGATaagaatttgtttaaaatgggCGATAAAGATAGTACCAGCAATGAAGAACAGTCTCAACAAGCCGATTCTATGCTCTGGTGTATGAGGACGTACCTTTCAAATGTACCCGAAGCGACAAGAAACAAGCTCAACATGGAGCGGAGCCTCTTTTATCAGCGACTTCTATCTGTGTTAAAATTCCCGACTATTTTGACAAGGCAAAAAACATCGGAAGTGTGCCTGTTCAGAACATTAAAAACAACTAAAATCCAAACATACAGCAGAAAATCCAGGATAGAACTGTCGAGACCATCAACCAGTAAGTGTACTAAAGAAATTACAAACAAAGTGTCAGAACATGAAAATATCAGCTCAAACGAAGGGACCGTTGAAATTAGCTCCGCTACGAATATTAATGATGTTTTAACAGATTTCTTCAGTACAACCAATAAACTGGAACGTTCAAATAGCACCAACCCAGTTCATATTAGCGACTCGGTCAgTACCAGTAAAAATCTCAATACCGAGCACTCTATAccaaaaaatctagaaaatatcTCTTCACTGGACCCGGTAGATGTTCGGGTTTTAACACGCTTAACACCAAATCAAATTATCAATGCTGAAAACAACTATGTCTTTAAAAGGAGTAATATCGATGTTATCACGTTAGTTGATAGCCTTCCCAAGACTGTACCAAATAGCaaaatgcaAATCtatggaaaaaatgtaaatagaaCATTAGGCGATCAACCATCAACTAGTGAATGTGAAACCAGTTTTGAAACAGTATGGATAAAACCGGAAGGCACAGTTCATAATACTACTAATACTATTCCAACAACTATTGCACCACTCAAAAAATCGAGCGCACAAAGAGTACGAAATCCCGAAGAACAACCTGCACAACAAAAGCTTGTCGAAAATGCAAACGAAGAATCCTTGAATAAATTCGTCTCGAACATTGATGACCTTCTGACGGATTTCTTTAGTGCTGCCATGAAGTTAAAATTTCAGAGCAGCGTAAATCAAGCCCACGTTAATCACGCCGTTGTGTCCGTTCAAGCTATTCTTTCCGCGCTGAACGTGGAATTATGCATACCAAAGGAGTTTCCAGAAATAACCAACTTGGATGTCGTCGACGTCGACATTTTAAAATCCCTGGTATCAAAAGCTTCCATGAATGAACACAAcgaatatgttattaaaagaaGCAGCCGTGATATAAACTCGCAGATTCCACCAAATCTGTACACTGCCGTCGGGATGAGAAGTTTGCTAATTAAAAACCATATTTACAAATCTACTAAAAAGGAAAACAACGTTCAGAATCGCAAGAACGCGCAAGATAGTCGCACCATATCATATCGGGGACGGAAACATCaaccaaataaaacaaaattcactCAGAAACAACTTAAAGAAGAACGAATTTTGTTCCACAAACGGCTAATGTCCCTTTTCAAATTCCCGGGTATCTTAACGTTACAGAAGCCTCCCGATGGTTTGACCAAAAACTTATcatcaaataataacaaagttGCGATCAGAacgtatagaaaaaaaaatcaaccgaAAGCCATCCTACCAAGTGAAGAAAATGGATCTCCAGTTATCGATTCCATGGCGGAAAAGTTAAAGCGTCGAATTAACGATGCAATAAAAAACCTCACTACACACTCGCCAGCTAAGAGATTCTGCTCGTCAAAAACGAAAACCGCTTCTAAACAAGTAAAGGGAAATGGTACAGACCAACCCAATACTGAAAAAGAAATGGTTCAGACACCATCAAGGGTATCAATAGGCACAAACAGAAACGAAGCAGGAAATAAAACAGTGTCAGAAAATGTTTCTCTAAGTGCCGATCTAGAAGATCTGAATGCTTTAAATGAAGCCCTCAAATGTGAGAACGTTGAAATTGATGAATCGTTCGATATTGActga
- Protein Sequence
- MNEAEDLKEIELLIEKQKLEEQECDEVEYSEFIDDYDSDEFIGENEDYEIPDYQKQDVSKLHTSTPSSILTVNEKKIVDMCKDPDLRELLILNRQKNMQLMQFFKVIKDLLIECQTNIMQKDNQIKAKNNDKRNNYKIWRIGRPYFKSADNFPCPRNEDTMQKHQKGELMYYDMIPSIKWFNNDAKRLMAGVAFIFKVIREEQLTKEISAMEQSDNVNHRKLKMLKQSVDDIRNSSEVVYPPRNFDKSIDWNRISHNFLCNKYSPEDCEIFWNIYLHPHINKGQWSGDENTKLKSIVLRHHHQNWDAIAKELGNNRTGFVSCIHYYRNVEPPKEGRFKPSEDKLLCDLVKVFKQGSYIPWTRIAYHFKNRTRGQLCYRYKYFLSCKDDIVKGKFTPAEDVLLMILVDRFGTRFSKCQEYFTNRCSVQLKARYTTNLKTAIKRASFTVEEDQRIIDYVEKNGPSQWVTLARTLSRTGGQIRQRYKILNDFFKGHPGASLEEAPRRKGTVLSFDKEFDFLRCIANVYKNHSKIPTLKEIEKVLLNSQNKIYNNKLLAEPQNHKQIDNLLTNFFCAKMNNEKTNQANINLAVIAVRQVLSILQAELCIPKELKDFPELNGVDHRILKSLTAREPKNEDGACEIKRDGNKINSLLPPNLFNVVGLLNLVDKNLFKMGDKDSTSNEEQSQQADSMLWCMRTYLSNVPEATRNKLNMERSLFYQRLLSVLKFPTILTRQKTSEVCLFRTLKTTKIQTYSRKSRIELSRPSTSKCTKEITNKVSEHENISSNEGTVEISSATNINDVLTDFFSTTNKLERSNSTNPVHISDSVSTSKNLNTEHSIPKNLENISSLDPVDVRVLTRLTPNQIINAENNYVFKRSNIDVITLVDSLPKTVPNSKMQIYGKNVNRTLGDQPSTSECETSFETVWIKPEGTVHNTTNTIPTTIAPLKKSSAQRVRNPEEQPAQQKLVENANEESLNKFVSNIDDLLTDFFSAAMKLKFQSSVNQAHVNHAVVSVQAILSALNVELCIPKEFPEITNLDVVDVDILKSLVSKASMNEHNEYVIKRSSRDINSQIPPNLYTAVGMRSLLIKNHIYKSTKKENNVQNRKNAQDSRTISYRGRKHQPNKTKFTQKQLKEERILFHKRLMSLFKFPGILTLQKPPDGLTKNLSSNNNKVAIRTYRKKNQPKAILPSEENGSPVIDSMAEKLKRRINDAIKNLTTHSPAKRFCSSKTKTASKQVKGNGTDQPNTEKEMVQTPSRVSIGTNRNEAGNKTVSENVSLSADLEDLNALNEALKCENVEIDESFDID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -