Rfer010021.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- osa
- Assembly
- GCA_014462685.1
- Location
- JAACXV010013919.1:163308-189136[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.9e-26 2.2e-22 79.6 0.0 2 89 702 786 701 786 0.95
Sequence Information
- Coding Sequence
- ATGAGTCAATATCGGCAGGATGGAGGCGGCGGATCGAGCACGGTACCGGGCGCCGTCGCTCAGGGCTCTTCAGCTGCCGGCGCGGGTCCAAACGGGGCCTCGGAAAGTGAAACCGATTCGACGTCGGGATCAGCGGTACCCCCAGAGTCTAACGCTTATTCGTCAGAAGGGCCATCGTCGGGGCCACCGACGGATACTCACGGATATCCATTTCCGTACGGGTCACCGGGGCCAGATCACGCGTTCGGCCCTCGACAACCATTCGGGGGGCCGAAGCAGCTGCCGCCGCCCCATCGCTTCGTGGCCGGACCGCCGCTCTCGCAGCCCTCGGGCCCAACGCCGACGCTCAACCAGCTGTTACAAAGTAATAACCCCGTACCGCATCGCTATCAGAATAACTACGCTCATCCGGACCAGCATTACAACCAGTGGTCTCAGAAGCATCCGCAAGGCTACGGTCCGGGTCCAGCACCGCCACCAGGCCCCTACAGGACGCAGCAAGCTTTGTCTCCTGCATACGGGGGTGGTCCGGGTTCAGCTCCAAGTCCGGGCGGATACGATTCAAGAGCTACTTGGCCTGGTGGTCCACCGCCTTCGGGTGCCTCACAACACGGACCTAGTAGTCCCGGCCAGGCACAGCCTCCATCTCAACAATCATCTCAAGCTCCTAACCAACCACCGACTTCTCAACCGCAAAATTCATCGGGATCTGTGCCTGTTAGTCAACCGTCGCCACAGCCATCGCAGCCTCCCATCAGTCATTCGCCAGGCCCGGGACCTGGAGGGCAAATGCCACCAAGTCCACAACATCATCAGGGACCAGGGGGTGGCCATCAACAAGGTTTCCCTAGTCGACCGCCACCACCCACAACTCCTAATGCCCACGGACCTGATGCAGCGGATCTCAGCGGAGGCAACAGTAACGATAGCTCAGGAGGACCAGCTCCTGGTACCCCAAATTCTCAGGGTATGCGACCGACGCCATCACCAACGGGATCTACAGGTTCTAGGTCGATGTCACCTGCCGTAGGCCAAAACATTCCCATGCCTCCCAGACCTTCAAGTAGTCAGTCTGACGGTGGGGGTGGCAGTGGTGGAGGCGGATCTGTCCCCGCTAGGTTGAGTCACTCTCCGATGCCACCGGGTCCAGGAGGTTACGGACCTCCTGGTCAACAATCACCTCATCAAGGTTCCTACAAAGGAATGGTACCGGGTCCCGGAGGGGGTGCCCAAAATTCACCACAAATACCTTTGTATCAACACCAGCCTGGACAGTATCCTGGACAAGCTGTAGGCTATAGTCCGCGACCTCCAGGAAATtttggaCCAGCTGGTCAAGGTTACACTCCGGGTTGTCCATCGCCCGGACCAAATTTGCGGCCTCCACACTACCTCAAACATCACCTGCAACACAAGATGGGTTTCGCGGGTGTCGGGCCAGGTTCCGCACCTCCCAGTCCTGGCCCACCGCAGAATTTTCATATGGGACCTCCATCTGGACACCACCATTCTGGAATGGGACCTCCTCCCTCTATGGGACCTCCTAATATGCCGCCATCGAGTAGTCCTATGTTGACTAATAATCATCCTCACGAAGGACCGATGCCACCACCAAGTTCAACTCCAAATTCTCATTCTCAGATGGTTAATGATATGCTAGACAACGGGATCACCACTACTCCCCAGGGTTCGATGAATACACACGTTAGTGCAGCTTCAGGTGGTTCAGTTACCTCTGTTGTGACTACTGGGCCTGATGGTACACCAATTGACGAGGGCTCACAACAGTCAACTTTATCCAATGCTTCAGCTGctTCGGGAGAGGATCCTGCATGTCCACAGACTCCCAAATCGAATAGAAAAAACGACATGGGTCATTATAGTCACCCAACAACTCCACAAAGTACGGTTCCATCCCCTGGGGCTGCTAGTATGAATTCCATGCACGAAGATTATGGTGAAATTAGTCCGAATTGGCCACGTACCCCTGCCAGCCCAGTGAGTAGACAAGTTTTTAACAGTCATGTGCCTCCACAGGATACATATCGCTCAAAGAAAACAGACAGCCTCAGCAAACTGTATGAGATGGATGAGAGCCCGGATCGACGAGCCTGGTTAGACAAGTTACTCGCCTTTATGGATGAGAGAAGGTCACCTATCACTACGTGTCCCACCATATCCAAGAACCCTCTTGATTTGTTTCGCTTGTATATGTTTGTTAAGGAACGCGGTGGCTTCATGGAGGTAACTAAGAATAAAACATGGAAAGATATTGCGGGTCTCTTGGGCATTGGAGCATCGTCTAGTGCAGCTTATACTCTCAGAAAGCATTACACCAAAAATCTGTTGGCGTATGAATGCCATTTTGATAGAGGTGGAATCGATCCTCAGCCAATAATAAACCAAGTGGAGGCGAGTAGTAAGAAGAAAGGCGCAAAGGCTACATCGGTTCCTTCACCTGGTTCATCAAATTCGCAAGACTCTTTTCCACCGGGTGGTGGCGGCGGAGGTTCTATGGATGGTTATGGAGGATATAACGGATATCCTCCTTCGGGCAATCCCGATTATCCTCAACGACCATCCTCACAGTCGGCACCATCGCCACATGGTGCGTCCGGATCCGCAAACCACCTGAACAGTACAGCTTCTGGGGGCCCTAGTCCTGCAGGCGGGGCTGCGGACAACGTGAGCGTTTCCAATCCATTCGATGATGTCTCGCCGAGTCCCCCTCCACGTGGTGGCCCATTCCCGAGTGGGCCTCACCCACCGTACCCTACAAATACCCCTCCGCGGCCACCTGGAGGTCAGAATTATTCCGGTCAACCGGGTTATCAATATCCAGGGCCAGGACCTGGTCAAAATGCTCCGCCAGATCAGTATTCTGCATATTCAAACACTCAGGGTTATCAGCCCGCCGTAAGACCCATGTATCCTCCATATTCAGGTGATTCGTCAGGTGCGCCGTCAGGGCAGCCAGCCAGTAGCCAGCCTCCATCCACTGGAACGCAAGACCCCTATAACCGTTACAATGTCAATCCGGCAGCGGGTTATAGCCCTAGGCCACCTTACGGTGGTACTCAAGGCACTGGAGGACCTCCTACTTCGCAGACAAGCGGACCTGGTGCTTATCCCGGTCACCAGGAATTTTACCGGCCGGATCAGAATTCGGCTGCAGGTGGTTACCCTGGAGTGTCTTCTACCAATAAAAACATGCCACCTCCAGGCCCTCAACCTCCCCGAAGACATCCGGATTTTGCCAAAGATCAACCTTATCCGCCATATCCGCAACCCAGGACTCCTATGTATGGAGGTTGGCCGAATAACAATCAGTATCGACCTCCACAATATGGAGCTCCGGGAAATAACCAAGTAGGGCCTCAACAGTGGAACCAAGGTGCACGTCCGAGTGGTCCATGGCCGAACAATCAAGGTTATCAGGGTTCTCAACCGGGACAGAATCAGTGgcaaccaataacaacacaaacCGGACAGAGCTCGCCTATGAGACCGGTTCATAGGCCAGGAAAACCGTTTCCGCCAATCATGCCACCCGGAGGTGCAGCCAAGGGCCCTAACCAACAGCCAGTTAGTAATTCTTATGGTCATGGTCAATTGCCGAAACGAGAAATCACATTTCCCCCTGACAGCGTGGAAAATGTGACTCCAGTCTTGTATAGGCGAAAGAGAATATGTCGATCGGATGTTGGCCAGGTAGATGCCTGGCGGATAATAATGTGCCTCAAATCAGGGTTACTAACTGAAGGCACATACGCATTGGATATGctcaacatattattatttgatgattCATCGGTGGGTTATTTTGGACTGAATCAGTGGCCGGGCCTGTTGGATTTGTTGCTTGAACAATTGAAGACGAATCTAGCGGACATGTTTGATGGCCCCTACCCAAGAGATGAGGAAACCGAACAAGAAACTGACGTTGATTTAGGTAGTGTAGTGAAACCCATTGATCCAAGCTTAAAAACGGTAgtcttaaacaaaacaaataattatactctGATGTCTCGTCGAGGTGATCCGGTAAAACTCGTAGAACGGTTTGATGATATTTTCGTTCAGGACAATTTAAAAGAATGGGATACCCGCGGTGACGTAAACGTAGCTAATACCTCAGCGGAAATACCAATGGACCCATGGTATACAAATGCTGAGCACATGTTGCCCAACTTTCAAGCGGAATTTGGCCGCATACCATTCCATACTAGATTGGAGGATAATAAGACTAAGCCCGAAGCAATCAAGGAAGAATGTAAGAGACAAGCGAGTCCACCTCTTGAAGATGCACCAGCTCCTAAAGTGAGTGACAAAAAGCGTAATAGGACAAAGACATTAAGTGATGTGATATCTCGAATTAAAAAGGAGTCACCTGAAGATAATGAACTCAATGTGCTCATGTTGGAATCGACGGCCACAAAATTGGACAATGTAGTAAAGACTGAGGTAGTGAGTGAGACTAGTTTGAACTGTGAGGAGTCAGCTTCCTCAAGTGTAGATCTGAACATTAGTGTAAATGGCGAGTGCAGCGACAGTACAGAGAACAGTAGTGAAATGAAGAGAGTGAGAGGCAAACCTATACATGATCCATCGGGTTCACTTAAGCGTAGGCGGTTGTCTGATTATGAAGACGAGTCCTATTCTAGAGATGAAGCCAGTTTGGTTTTGCTTACAGAGAGCCAAGACAATTTGGGCAAGAGATGCGTCTGTATATCAAATATACTTAGGAGCCTTACTTTCATTCCTGGCAATGAAACTGAGTTTGCCAAAAGCATTAGCTTCTTAGCGCTTGTAGGAAAATTACTATTGCTACATCATGAACATCCCCCAAGAACTCAGAAAACGAGAAATTATGATCGCGAGGAAGATGCCGATTTCGCAGACTCATGCAGCAGTTTACAGGGCGAAAGTGAATGGTGGTGGGATTTTTTGGCTCAAATTCGAGAGAATATTTTGGTGTGCATCGCCAACATAGCCGGCCAGATAGACGTGTCTGTATATGACGAAGAAGTAGCCAGATCCCTACTGGATGGACTGTTACATTGGGCTATCTGTCCATCGGCGACAGCACAAGATCCGTTCGCGTCCATCGGCCCCACGTCTTTATTGTCCCCTCAACGACTAGCTCTGGAAGCCTTGTGTAAACTGTGCGTCACGAATAGCAACGTCGATCTAGTAATTGCAACCCCTCCATTCTCGAGATTGGAAAAACTTTGTGCTGTACTGACGAAACATTTGTGCCGTTCCGAAGACCAAGTATTGAGAGAGTTCTCTATAAATCTCCTGCACTATTTAGCCGCGGCGGATAGCAGCATGGCTAGAGTAGTCGCCGCCCAGCCCCCTTGCGTCTCTCTTCTGGTGGCCTTCATTGAACAAGCAGAGCAGAGTGCTCTTGAGGTGGCCAATCAGCGTGGAATCACTGCATTAAGAGATAATCCCGACTCTATGGGTACCAGTTTGGACATGTTACGAAGGGCTGCTGCAACATTAGTTTTTCTTTCGCGACATCCGGACAACAAGGCTTTATTGGTACAACAAGAGTCTCGGTTGCTAGCTCTTGTCATGAGTCAGATCTTGGACCAGCAAGTGGCGCTGTTAATCTCGAAAGTGCTGTTCCAGATATCCCGCAGCTAA
- Protein Sequence
- MSQYRQDGGGGSSTVPGAVAQGSSAAGAGPNGASESETDSTSGSAVPPESNAYSSEGPSSGPPTDTHGYPFPYGSPGPDHAFGPRQPFGGPKQLPPPHRFVAGPPLSQPSGPTPTLNQLLQSNNPVPHRYQNNYAHPDQHYNQWSQKHPQGYGPGPAPPPGPYRTQQALSPAYGGGPGSAPSPGGYDSRATWPGGPPPSGASQHGPSSPGQAQPPSQQSSQAPNQPPTSQPQNSSGSVPVSQPSPQPSQPPISHSPGPGPGGQMPPSPQHHQGPGGGHQQGFPSRPPPPTTPNAHGPDAADLSGGNSNDSSGGPAPGTPNSQGMRPTPSPTGSTGSRSMSPAVGQNIPMPPRPSSSQSDGGGGSGGGGSVPARLSHSPMPPGPGGYGPPGQQSPHQGSYKGMVPGPGGGAQNSPQIPLYQHQPGQYPGQAVGYSPRPPGNFGPAGQGYTPGCPSPGPNLRPPHYLKHHLQHKMGFAGVGPGSAPPSPGPPQNFHMGPPSGHHHSGMGPPPSMGPPNMPPSSSPMLTNNHPHEGPMPPPSSTPNSHSQMVNDMLDNGITTTPQGSMNTHVSAASGGSVTSVVTTGPDGTPIDEGSQQSTLSNASAASGEDPACPQTPKSNRKNDMGHYSHPTTPQSTVPSPGAASMNSMHEDYGEISPNWPRTPASPVSRQVFNSHVPPQDTYRSKKTDSLSKLYEMDESPDRRAWLDKLLAFMDERRSPITTCPTISKNPLDLFRLYMFVKERGGFMEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASSKKKGAKATSVPSPGSSNSQDSFPPGGGGGGSMDGYGGYNGYPPSGNPDYPQRPSSQSAPSPHGASGSANHLNSTASGGPSPAGGAADNVSVSNPFDDVSPSPPPRGGPFPSGPHPPYPTNTPPRPPGGQNYSGQPGYQYPGPGPGQNAPPDQYSAYSNTQGYQPAVRPMYPPYSGDSSGAPSGQPASSQPPSTGTQDPYNRYNVNPAAGYSPRPPYGGTQGTGGPPTSQTSGPGAYPGHQEFYRPDQNSAAGGYPGVSSTNKNMPPPGPQPPRRHPDFAKDQPYPPYPQPRTPMYGGWPNNNQYRPPQYGAPGNNQVGPQQWNQGARPSGPWPNNQGYQGSQPGQNQWQPITTQTGQSSPMRPVHRPGKPFPPIMPPGGAAKGPNQQPVSNSYGHGQLPKREITFPPDSVENVTPVLYRRKRICRSDVGQVDAWRIIMCLKSGLLTEGTYALDMLNILLFDDSSVGYFGLNQWPGLLDLLLEQLKTNLADMFDGPYPRDEETEQETDVDLGSVVKPIDPSLKTVVLNKTNNYTLMSRRGDPVKLVERFDDIFVQDNLKEWDTRGDVNVANTSAEIPMDPWYTNAEHMLPNFQAEFGRIPFHTRLEDNKTKPEAIKEECKRQASPPLEDAPAPKVSDKKRNRTKTLSDVISRIKKESPEDNELNVLMLESTATKLDNVVKTEVVSETSLNCEESASSSVDLNISVNGECSDSTENSSEMKRVRGKPIHDPSGSLKRRRLSDYEDESYSRDEASLVLLTESQDNLGKRCVCISNILRSLTFIPGNETEFAKSISFLALVGKLLLLHHEHPPRTQKTRNYDREEDADFADSCSSLQGESEWWWDFLAQIRENILVCIANIAGQIDVSVYDEEVARSLLDGLLHWAICPSATAQDPFASIGPTSLLSPQRLALEALCKLCVTNSNVDLVIATPPFSRLEKLCAVLTKHLCRSEDQVLREFSINLLHYLAAADSSMARVVAAQPPCVSLLVAFIEQAEQSALEVANQRGITALRDNPDSMGTSLDMLRRAAATLVFLSRHPDNKALLVQQESRLLALVMSQILDQQVALLISKVLFQISRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00443724;
- 90% Identity
- iTF_00376039;
- 80% Identity
- -