Rfer022499.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- ATFC
- Assembly
- GCA_014462685.1
- Location
- JAACXV010014285.1:111512-135974[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-12 2.8e-09 37.2 6.8 1 63 196 258 196 260 0.95
Sequence Information
- Coding Sequence
- ATGTCTCTTTGCTACGAGCCATCATTTCTCCTTGATGAAAAAATGCTACCTATGCTGGACGATGTAGAACCACCACGTGGGGCTGTCGCCGTCCCAGTATATTACAAAAGCGAGGACAACACATACTTCATTAATGAATTGGAAAAAGTTTACTTCGAGTTCAATCATGGTACTTTAACACCACCACAAAGTCCTCCAGCTGAACAACCAATAATCATCACTTTGGAACCACCACTAGAAAACCAATATCATGTTCAACCTAAAGACACCATTTACTCCGTACCTGATAAGCAAGTTCCAACCGAAGGGCTTCCTTTCGTTGACATGCCTTACACCTCTTCTATGCCGACGCCCCAACCGGACATTGCTCATGAATTAGCGGTGGTGGATGAATTGGTGCGTACCCGCGTAGAGAACATGCAATGGAGTAGTGGACCATCTTCCCCTGACAGCAGTAGTAACAGTAACTTTGAGGATTGCTCTTCAGATGACCCAGAATGGATGCCTGAACCAATAGAGAACTATGGATCGTATGGCATAGTTCAAAAATCATCGACGAAAAGAAGCAAACCGTACTCCACGTCACCAGATGATAAAAAATCCaggaaaaaagaacaaaataagaACGCTGCTACCCGGTACCGTTTGAAGAAGAAGGCCGAAGTTGAAGAAATCCTAAATGAAGAGAAGGATCTCCTGGAGAAGCACGGAGAGTTAAATTCCCAAATTGTCGATCTCCAACGCGAAATAAAGTACCTAAAGGGTTTAATGCGTGATCTCCTAAAAGCCAAGGGCGTTatccattaa
- Protein Sequence
- MSLCYEPSFLLDEKMLPMLDDVEPPRGAVAVPVYYKSEDNTYFINELEKVYFEFNHGTLTPPQSPPAEQPIIITLEPPLENQYHVQPKDTIYSVPDKQVPTEGLPFVDMPYTSSMPTPQPDIAHELAVVDELVRTRVENMQWSSGPSSPDSSSNSNFEDCSSDDPEWMPEPIENYGSYGIVQKSSTKRSKPYSTSPDDKKSRKKEQNKNAATRYRLKKKAEVEEILNEEKDLLEKHGELNSQIVDLQREIKYLKGLMRDLLKAKGVIH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00376013;
- 90% Identity
- -
- 80% Identity
- -