Rfer002793.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- Tef
- Assembly
- GCA_014462685.1
- Location
- JAACXV010019986.1:1-2043[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-12 1.2e-09 38.3 8.2 1 54 102 155 102 158 0.97
Sequence Information
- Coding Sequence
- TTATTCTTTTCAGATCCTGCTTTGAAATCGTTAAGAGAAGTTCCAACTGTCGATAGCACCACGTTAAACGTTGCTGCAGATGATATTCACCTGTTAACTACGATAGAACCCGAAAAACCATGCGTTAACCTAGTTCCAGCTACAATTTTTACACCATCTGCTTTATTGCCCTATTCGCATTCCTTCAGATTACTACATGAGAAGCCAGgGTGTCCCATAACAAATAGCATAGCATCAGGCACGTTAGGGAGTTGCAGTATTAAAAAACAGCGTAGTGAAAAGAAACCAATACCTAACGAACAAAAAGATGATAAATACTTCGAAAGGCGAAGAAGAAACAATCAAGCAGCAAAAAAATCTAGAGATGCGCGAAAAATGAGAGAAGACCAGATAGCTTTAAAAGCGGCCATTTTGGAACATGAAAATGCCCTTTTAAGAGCCCAGGTACTAACACTTAGAGAGGAATCATCATCGTT
- Protein Sequence
- LFFSDPALKSLREVPTVDSTTLNVAADDIHLLTTIEPEKPCVNLVPATIFTPSALLPYSHSFRLLHEKPGCPITNSIASGTLGSCSIKKQRSEKKPIPNEQKDDKYFERRRRNNQAAKKSRDARKMREDQIALKAAILEHENALLRAQVLTLREESSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -