Rfer012671.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- HLF
- Assembly
- GCA_014462685.1
- Location
- JAACXV010000026.1:228290-234675[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-14 4.2e-11 43.0 13.3 1 64 199 262 199 263 0.97
Sequence Information
- Coding Sequence
- ATGTATAACAACGTTGTATATAACACGCTGATGTCGTCGGGTTACATGAATTATTATCAGTATTATTTGGGTATTATCAATCGAATGTTTCGGAATCCGCAGTCAGGCAACTGTAAAATTTCACATCAACACGGCCATGGACATTCGACCCTTAAAGATCTCGCTGGGACTATACTGGCCGAAGAGAAAAAAGATGATGGTGAATTGTGGAGTACGGTAGAAGCACAGACCGCCTTCTTGGGGCCTAATTTATGGGACAAAACTTATGAAACGGACCTTAAGtaTGTCGATTTGGACGAATTTCTATCGGAAAATGGAGTTTCCATGGACGGTCTTGGGACTCATGGTACACTGGGACCTCTAGGCAGTACCAACCCTGTTCCAAAACGGGAACGCTCGCCTAGTCCAAGCGATTGCATGAGCCCCGACACCATCAATCCTCCGTCACCAGCTGACTCAATTTTTTCTGAAGCGCTGTCGATGGCGTCTAGTTGTCGAGACTTCGATCCACGGACAAGGGTATTTTCAGATGAGGAGCTCAAGCCTCAACCCATCATCAAAAAGTCGAGGAAGCAGTTCGTGCCCGATGACCTCAAGGACGACAAATACTGGGCGAGGAGGAGAAAGAACAACCTGGCGGCGAAACGGTCGAGAGACGCTCGACGAATGAAGGAAAATCAAATAGCGCTACGTGCTGGTTATCTGGAGAAAGAGAACGTTGGACTTCGCCAAGAGCTGGAACGACTGAAAAAAGAAAACCTCTTGCTCCAAAACAAATTGGCCAAATACGAAGACGTTTAA
- Protein Sequence
- MYNNVVYNTLMSSGYMNYYQYYLGIINRMFRNPQSGNCKISHQHGHGHSTLKDLAGTILAEEKKDDGELWSTVEAQTAFLGPNLWDKTYETDLKYVDLDEFLSENGVSMDGLGTHGTLGPLGSTNPVPKRERSPSPSDCMSPDTINPPSPADSIFSEALSMASSCRDFDPRTRVFSDEELKPQPIIKKSRKQFVPDDLKDDKYWARRRKNNLAAKRSRDARRMKENQIALRAGYLEKENVGLRQELERLKKENLLLQNKLAKYEDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01021978;
- 90% Identity
- iTF_01021978;
- 80% Identity
- -