Rfer001643.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- Xbp1
- Assembly
- GCA_014462685.1
- Location
- JAACXV010000001.1:2188478-2190369[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.9 1e+04 -3.1 0.2 18 24 31 37 29 39 0.64 2 4 2.3e-14 2.4e-11 43.8 10.7 2 52 43 93 43 95 0.96 3 4 8.3e-05 0.086 13.2 2.6 32 60 87 115 85 119 0.90 4 4 9.1 9.4e+03 -2.9 0.4 8 13 204 209 202 220 0.52
Sequence Information
- Coding Sequence
- ATGACAACGCTACCGGTGCCAAcaattcttaatatattaaacgaCGAAAACAACAATTATATGATGGATCAAAATACGGACACACCTGTAAGGGCCAGGAAAAGACGTCTGGATCATTTATCTTGGGAAGAAAAAATACAGAGAAAgAAACTTAAAAACCGAGTAGCAGCCCAAACATCAAGGGATAGGAAGAAAGCAAAATTGGAACAGATGGAAAAGGCTATACAACAATTGTTCTCAAAAAACGAGAAGCTTATATCCGAGTGTGAGCAGCTCAAGGTCACAAATGAAAGATTACAGGCAGAAAATGCAGAGTTAAGAGATCGTCTTCagGGTGTGGAGCAGTGTCAATGTCAAAACCGGCCTGTCGTGTGCAAATCCGAATGTGGATCAACCGAATCCCTCCTTCGACCGAAAGGAACGGGCATGCACACAGCAGCGGCTTTGACCAGCCGGCGCAGAACCATTCTCCTGAAGACAATCCTGACCTGCCTTCTCTACCGGACCTGCTCGACGAACTTGACAGCGAGGCGGTCGATCTCAACGCCCTCGAACAACTCACCCAAACTTTGCTCGAAGACATTGCTCGGGATCTCGAATGTGCTTCGGAAAAAGCAACTCAACAGGAAACAACAGCCATCTGCTCAGAAAATAAAGTTGGGCAAATGGTGGGGACGACAtcagaaaacttggaatccaGTCGAAGCAAAGTGCTAG
- Protein Sequence
- MTTLPVPTILNILNDENNNYMMDQNTDTPVRARKRRLDHLSWEEKIQRKKLKNRVAAQTSRDRKKAKLEQMEKAIQQLFSKNEKLISECEQLKVTNERLQAENAELRDRLQGVEQCQCQNRPVVCKSECGSTESLLRPKGTGMHTAAALTSRRRTILLKTILTCLLYRTCSTNLTARRSISTPSNNSPKLCSKTLLGISNVLRKKQLNRKQQPSAQKIKLGKWWGRHQKTWNPVEAKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00376006;
- 90% Identity
- -
- 80% Identity
- -