Rfer016374.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- Jra
- Assembly
- GCA_014462685.1
- Location
- JAACXV010014584.1:3846968-3848178[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.8e-18 8.1e-15 54.9 11.0 2 65 156 219 155 219 0.95
Sequence Information
- Coding Sequence
- ATGACTCATTTACGCACTGTCAAGGAATGTTTGTTTTCTTCCATAAgtTTTATGGAAATAGCCGATAATATCTACTACTTCctattaGCTAAGAAGAATATTACATTTCCTTTATCTACAGGAGAGGCTATGTTAGGTGATGTTTTATCATCTCCAGATTTAATGAAGCTTAAAGTTGATACCCCTGAACTGGAGAACATGATACTTGATAACCCATTACCTACTACACCAACACCATCATTTCCATTTCCAAAAAGTGTTACTGCAGAACAAGAAAGATTTGTTGGAGGTTTTGTAGAAGCACTAAGTAATCTTCATAATAACAACTCACAACATGGATCAGACAGTAATGCTAGCACAATTTATAACGAACCATTTATTCCACAAATAAAAGAAGAACCACAAATAGttccaaatattaataacagcCCACCAATGTCACCAGTTGATATGGAATATCAGGAAAGAATTAAATTGGAAAGGAAACGCCAAAGAAATAGATTGGCTGCCTCCAAGTGTAGATCTCGCAAATTGGAAAGAATATCAAAACTGGAAGATAAAGTTAAACAGCTAAAAAGTGAAAATGCAGAATTGGGCTCTATGGTGAATCAGTTAAAGGAAACAGTAGGATTATTAAAATTGGAAGTGATGGAACATAATAAATCTGGCTGCCAGATAGTTTTGTACTAA
- Protein Sequence
- MTHLRTVKECLFSSISFMEIADNIYYFLLAKKNITFPLSTGEAMLGDVLSSPDLMKLKVDTPELENMILDNPLPTTPTPSFPFPKSVTAEQERFVGGFVEALSNLHNNNSQHGSDSNASTIYNEPFIPQIKEEPQIVPNINNSPPMSPVDMEYQERIKLERKRQRNRLAASKCRSRKLERISKLEDKVKQLKSENAELGSMVNQLKETVGLLKLEVMEHNKSGCQIVLY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01106932;
- 90% Identity
- iTF_00845623;
- 80% Identity
- -