Rexs020887.1
Basic Information
- Insect
- Rhorus exstirpatorius
- Gene Symbol
- nfxl1
- Assembly
- GCA_963564615.1
- Location
- OY751322.1:10290457-10296696[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.1 1.3e+04 -3.3 1.1 15 19 128 132 127 132 0.81 2 16 0.11 1.3e+03 -0.1 0.3 4 10 163 169 162 169 0.94 3 16 2.9e-08 0.00035 20.9 16.6 1 19 177 194 177 194 0.99 4 16 0.0067 80 3.8 9.7 3 19 232 250 231 250 0.80 5 16 0.012 1.4e+02 3.0 13.5 1 19 285 304 279 304 0.90 6 16 4.6e-05 0.55 10.7 6.3 1 18 358 375 358 376 0.96 7 16 0.0015 18 5.9 7.5 1 12 410 421 410 421 0.94 8 16 4.2e-07 0.005 17.2 14.8 1 19 441 459 441 459 0.94 9 16 0.61 7.3e+03 -2.5 1.0 5 10 487 492 487 492 0.94 10 16 0.00017 2 8.9 7.9 10 19 508 517 505 517 0.90 11 16 0.0043 51 4.4 7.9 1 12 527 537 527 540 0.92 12 16 0.91 1.1e+04 -3.0 5.8 14 18 584 588 584 589 0.89 13 16 0.00061 7.2 7.1 7.9 1 12 625 636 615 636 0.92 14 16 0.61 7.2e+03 -2.5 1.4 6 10 661 665 660 665 0.88 15 16 1.6e-05 0.19 12.2 11.4 2 19 674 690 673 690 0.91 16 16 1.3e-05 0.16 12.4 11.2 1 16 735 749 735 754 0.92
Sequence Information
- Coding Sequence
- atgcgaaaattcaAGAGGGCCCGGGCCGAAAATCAGGCATCAATAGAGAAACATCTGGCAAATGCCGATGATACGTTTCTCGATTCTTCGAGCGACGATGACAACGAAGAGAATCAAAATGCGCTGCGAGAGGCGTTCGACAAAGTCCTGTCCGTCTATCAGGGCGAGGGAGGTgatatcgaaaaatcattgtcCTATCTGACGGATGTATTTCAATCGGGAGGAGCGATATGCTTGATCTGCATCTCTTCTGTAAAAAAGACAGATCCGATCTGGAGCTGCGCGGTCTGTTACTCATTCATGCATCTGACGTGCGTGCAACACTGGATACGGGACAGTCTGAGTCATAAACGCGAGAAAGGATGGACTCTTCTGTGGGCATGCCCAAAATGCAGGATGGAATATCCGGAGGACGAGATACCAAAGAGATACGTGTGtttttgcggcaaaataacggaACCCCCGTATAATCCATGGTCAATAGCTCATTCTTGCGGTGAAATATGCGACAAGCCACTGAGGCCGGACTGCGGTCATCGTTGTCTATTGCTCTGTCATCCGGGGCCTTGTCCGCCCTGTCCAAAGACGACGAGCGTGCGATGTTTCTGCGAGAAAGAGGCGGCTCGGACGCGTCGCTGCAACTCAAAGCGCTGGAGCTGCGCCAATGTTTGTtcgaaaaaattgccaaattgCGAGCATCGGTGCCGCGAGATTTGTCACTCGAGCGTGACCGGCTGTCCGCCGTGCTCCGAGATAATAGCAGCCGATTGTCACTGCGGCGGGAGCAGAGAGGATCGGGTCTGCGAACGGGCCGTTTGGTCGTGCGAAAAACGTTGCGGAATTCGTTTTTCGTGCAACGTTCACGTTTGCGAGGGTCGCTGCCATCGTCCGGGCGATTGCGGCGATTGTCCGAGCGGAAAAAATCGCTCTTGTCCATGCGGCAAGAAACGCTATTACGATATTCCATGCactgagaataataataataataataataataataataataataacaacaacagcagGGATGCGGTACCGACATGCGGCGATACGTGCGGAAAACTTCTCGATTGTGGCTCGCATTACTGCAACATGCGCTGTCATTATGATCGTTGCGGTGCCTGCCTCGAGGTCGTTGCCAAGAGCTGCCGTTGCAAGAGCTACCGCAAGGAAATCGCCTGCGCCAAGGAATTTCATTGCAACAAAAAGTGCACGCGCATGCGCAACTGCGGCAATCATATGTGCAACAAGAAATGCTGCGACTGCACGTTGCGCGATTATACGAATgtttgcgataaaatatgcgACAAAACGCTCAATTGCCAAAAGCACAAGTGCTCGATGCCTTGTCACAGCGGACCTTGCTATCCCTGTCCCCGTACGAACGTTCTTCAGTGCCGTTGCGGCGGTAGCAAAGTAACCCTGCCGTGCGGACGAATGAAGCGCGTGCAGCCGCCGAAATGCAACAAATTGTGCAAAATACCAACCGTTTGTCATCATGCCAAACGAGAATCTCACAGGTGTCATTACGGACCTTGTCCGCCGTGTCGTAAAATCTGTCCTCTCGTTCATAAAAAATGTGGACACGCGTGCACGGCGATTTGTCACACGAATGTTTGCGTGAAAATTGGCCCCGAGtcgagcaacagcagcagcagcggcggcggcggcggcggcggaaACAACGCTGATCTTGGAACAACTTGGCCGTTTGCGGAGCAACGAATGAGAAAACGACTGAAAAACTTGCCATGTCCGCCGTGCGAGATATCCGTAATGGTGACCTGTCTCGGCGGTCACGAGACCCTTCCTCTGCCTTGTCACAGAGCGTTAGCGGAATCTTGTCTGAGGCCGTGCGGTCGTCCGCTCCGATGTACGAATCATACGTGCGAATTGCCCTGTCATCGGATTTATTATTCGTCAGATGCCAATGGCACGGAAAAGAACGAAGATTCGATGGAAATTATCGAATGCGCGGAGTGCGAGAGACCCTGCGCTCTGCCGAGACCCGAGGGATGCGCTCATTCTTGTCCAAGATTTTGTCACGGAGGATCGTGTTATCCGTGCAAACAGCTCGTAAGAGTATCCTGTCACTGCGGCATCAATTCATTGTACAAACGATGCGCCCAATTATTTTCCGCAGCCAATGACAAACGGGAAGAGTTGCTCAATTGTGGCAATCAATGTCCCAAAAACTATTCGTGCGGACATCGATGcgtgaaaaattgtcattcCGGTGAATGCCCGAACGCGGAAGCTTGCATCAAGAGAATCAAAGTATGGTGCGTATGCAAGAGAATCAAGAAAGATTTTACCTGCATGGAATCGCGCGGAGGTAAAGCGATCGTCGGGTGCGATGAAACTTGTCGGAGAATGAAGAAAGAACGAGATATGGCGGGGGAGATGGAGGCAGCGAGGAAACTGGAGGAGCAAAAAGCGAGAGATCGTATCGAGGTTGAGAGATTTGAGAGGAAATTCAAGCGACGACGAACAAGAGCAAAGGAGAAAAGCTCATGTTCGGACGATGATTCTTCTCGCGGATACGCGACGACGGGTCTCTTGAAAAAATTCGCACTTTTACTGCTCGTATTGCTCGCGATCGCTCCCATAATATTTTACACGAATAAACGATGA
- Protein Sequence
- MRKFKRARAENQASIEKHLANADDTFLDSSSDDDNEENQNALREAFDKVLSVYQGEGGDIEKSLSYLTDVFQSGGAICLICISSVKKTDPIWSCAVCYSFMHLTCVQHWIRDSLSHKREKGWTLLWACPKCRMEYPEDEIPKRYVCFCGKITEPPYNPWSIAHSCGEICDKPLRPDCGHRCLLLCHPGPCPPCPKTTSVRCFCEKEAARTRRCNSKRWSCANVCSKKLPNCEHRCREICHSSVTGCPPCSEIIAADCHCGGSREDRVCERAVWSCEKRCGIRFSCNVHVCEGRCHRPGDCGDCPSGKNRSCPCGKKRYYDIPCTENNNNNNNNNNNNNNNSRDAVPTCGDTCGKLLDCGSHYCNMRCHYDRCGACLEVVAKSCRCKSYRKEIACAKEFHCNKKCTRMRNCGNHMCNKKCCDCTLRDYTNVCDKICDKTLNCQKHKCSMPCHSGPCYPCPRTNVLQCRCGGSKVTLPCGRMKRVQPPKCNKLCKIPTVCHHAKRESHRCHYGPCPPCRKICPLVHKKCGHACTAICHTNVCVKIGPESSNSSSSGGGGGGGNNADLGTTWPFAEQRMRKRLKNLPCPPCEISVMVTCLGGHETLPLPCHRALAESCLRPCGRPLRCTNHTCELPCHRIYYSSDANGTEKNEDSMEIIECAECERPCALPRPEGCAHSCPRFCHGGSCYPCKQLVRVSCHCGINSLYKRCAQLFSAANDKREELLNCGNQCPKNYSCGHRCVKNCHSGECPNAEACIKRIKVWCVCKRIKKDFTCMESRGGKAIVGCDETCRRMKKERDMAGEMEAARKLEEQKARDRIEVERFERKFKRRRTRAKEKSSCSDDDSSRGYATTGLLKKFALLLLVLLAIAPIIFYTNKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -