Basic Information

Insect: Rhorus exstirpatorius
Gene Symbol: -
Assembly: GCA_963564615.1
Location: OY751321.1:21598506-21606048[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0031 0.3 12.0 1.3 2 21 878 897 877 899 0.93

2 16 6.6 6.5e+02 1.5 1.7 1 23 931 953 931 953 0.94

3 16 0.0014 0.13 13.1 2.0 3 23 962 983 961 983 0.98

4 16 0.0012 0.12 13.2 2.1 1 23 990 1013 990 1013 0.96

5 16 0.00067 0.066 14.1 2.1 3 23 1021 1042 1020 1043 0.96

6 16 3.8 3.7e+02 2.3 0.7 3 23 1051 1070 1050 1070 0.85

7 16 2e-07 2e-05 25.2 0.8 2 23 1076 1097 1075 1097 0.97

8 16 2.4e-06 0.00023 21.8 0.3 1 23 1103 1125 1103 1125 0.99

9 16 0.0049 0.49 11.3 2.8 2 23 1137 1159 1136 1159 0.95

10 16 2.6 2.5e+02 2.8 0.9 1 23 1165 1188 1165 1188 0.88

11 16 0.017 1.7 9.7 1.1 3 23 1214 1235 1213 1235 0.95

12 16 0.00012 0.012 16.4 0.8 2 23 1242 1264 1241 1264 0.96

13 16 3.7e-05 0.0037 18.0 1.9 2 23 1272 1293 1271 1293 0.97

14 16 0.0014 0.14 13.1 2.3 1 23 1299 1322 1299 1322 0.96

15 16 0.37 37 5.4 3.2 2 23 1329 1350 1328 1350 0.96

16 16 0.039 3.9 8.5 2.4 1 23 1356 1378 1356 1378 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0031	0.3	12.0	1.3	2	21	878	897	877	899	0.93
2	16	6.6	6.5e+02	1.5	1.7	1	23	931	953	931	953	0.94
3	16	0.0014	0.13	13.1	2.0	3	23	962	983	961	983	0.98
4	16	0.0012	0.12	13.2	2.1	1	23	990	1013	990	1013	0.96
5	16	0.00067	0.066	14.1	2.1	3	23	1021	1042	1020	1043	0.96
6	16	3.8	3.7e+02	2.3	0.7	3	23	1051	1070	1050	1070	0.85
7	16	2e-07	2e-05	25.2	0.8	2	23	1076	1097	1075	1097	0.97
8	16	2.4e-06	0.00023	21.8	0.3	1	23	1103	1125	1103	1125	0.99
9	16	0.0049	0.49	11.3	2.8	2	23	1137	1159	1136	1159	0.95
10	16	2.6	2.5e+02	2.8	0.9	1	23	1165	1188	1165	1188	0.88
11	16	0.017	1.7	9.7	1.1	3	23	1214	1235	1213	1235	0.95
12	16	0.00012	0.012	16.4	0.8	2	23	1242	1264	1241	1264	0.96
13	16	3.7e-05	0.0037	18.0	1.9	2	23	1272	1293	1271	1293	0.97
14	16	0.0014	0.14	13.1	2.3	1	23	1299	1322	1299	1322	0.96
15	16	0.37	37	5.4	3.2	2	23	1329	1350	1328	1350	0.96
16	16	0.039	3.9	8.5	2.4	1	23	1356	1378	1356	1378	0.98

Sequence Information

Coding Sequence: ATGAGTGAATCGACGGAAAGTGTGTTGTATTTTGGGGCCGAGGGCAATGACAATAATGGGACGAGTGTTGTCGACAATTTGAACGACGATACGTCGGCCCACGAGGCTCTCATACGAGATCTCACCTCGGAGAGTATCGTAATGCTGGACGATGTTCTATGTGAAAATAATCGAACGCTGGACATCGCTGCTTCGAATGACAATGCAAGGAGTAATGTTTTTAGCGTCGGTGGAAATGTTATCCAGGAGTACAGCATCGTCGGGATGAATCCAgaTTCTATGCAAAAACAAGCAAAATCATGTCCGAGCTTCGCGACAAAGTCGATCAAACGAGATCACGATAGCGGCGACGCTAGAAGATTCTTAGATCTCGATAAaccgttgaaaatttttgataaaaacgatTGCACGATAATAAGAAATAATTCCGTGTCCCTCTTTCGGGGCGCGAAGCGCGCGATGCCTCCCTCGACGCAAGAAAAATCGATAGCCAGAGTGAAAAATATAAgcgaattgaaaaaagtaactCCCAGAGTGAAGCTCGTGGCGCCCGAAACGACCACGAGTCTCGCGAAATTAACGGGTATAAATATAACGAGCGGCATAAAGACGAAAGACTCGTCGAGTCGCGAGATCGCCAAGCGCGaacaattgaataattattgtCGAACTTGCGCCGGCCTGAAATTACCGCTGGTCGATATATTCAGCGAGAAGGGAGCGCAGATGCGTCTCAATCAGCAGATGAAACATCTCAAAGATATAAAAGAGAACGACGGCATGTCGACTAAGATGTGCATGGATTGCATATGCGATCTTAAAAtgagttacaaatttttcatgcaaatcAATAAAGCACAGATAAAATTGCAAACGATAAGCGCAGCGTCGTCCGACGAGAACAAAGCAGCCGCGCGCGTTCGTCCCAATAACGAGAACGACGGCTCGCGCTCGATAGCGACGATATGCCTCGCCGAAAGTCCCGAACGTACGAGCTGCAaagcgaaaaaaatcgatagccCAAGATCCCAGAATACGAGAAACCCAAcgaatttcgaaataatttccAACGAACAAACATTGGCCGAGAAAACGAATGATAACGAGGCTCGCGTAAAGATCGAGCCACGAATCGACGAATCCTGCGCTTTACAAATCAGCGACGATTCGATCGAGGAATTCGATCCCGATGATCCCTCCTTTCGTGACGATCTTCCCGGCTTCGTGaaagaaattccaaaaaattttcacgaaacggAAATAACGCAATGCGAAAATACGCTATCGTTGATCGATGAGAATCCTCCTCCCGTCCCGTTTGTTCCCATCCCCGAATTGAAAACCGAGCAAAAATCCGATACGTCCCAAGATCCGAACAAAATGGTCTATCGttacgatgaaaatttgaaagctTATGTAAAAGTCGAGACGACGAGCGAGGAAAACAAGATCGATCCAAGCGACGATACAGTCATCGATACGGCGCAACTTTTGGCCAACGAAAGATCCGACAATGAAGCGAAAAGTTCCGGCTGCAAGGATATCGCGAAATCGTTAAATATCCTCAAGCGCAAAAGTTCCGTGAATTTTTTAGAGAATCCCGTGGCGCGCGTCAAACGTTCGGATTCGACGTGCGCCAGATCGGGAAAAAGAGGAGATTCCAAGAGGCCAAAATTGAATGTAAAAAACGCATTGAACGTGACGAGCGTGAACGAGGATGGTATAATGTACGTGACCGTAAAGGGAACGAAGCCCAACGAGCTTCTGCTCgtaaaggtgaaaaaaatggagaaaacaTTGGACAATGCGAATAAAAAGGACGGTGCGAGAAAACAGCGTACGAGCGACGGAGCCCTGACGGTCGATGAGATATTGAAGAAGCTCGAGCCCGTGATAAAGAAGGAAACGGAATATCGCGTCGAGCGTTCGAGGATTCTCgataatcgtgaaaaatcgatTGCCCAACAGATCGAGGATTACAAGAGAAAGCGGGAAAAAATATTGGGCGGTAGTTCAGGCGTGCCGAACGCATTGAAATTCGAGGACGGTATGATACGTTTCGTCAATCCGATCGAGACCAAAACGTGTCCGatcggcgacgacgacgacgatgccgTGCGCGTGAAAATCGAGCCTAGCGAGAAAATCGAGCCTAGCGAGAAAATCGAGCCTAGCGAGAAAATCAACGATACGACAGATCCATCCGCCTCGCCGAGCATCGATCGCGACGTTTCTCCCCCCACGAATCAAGAAACGACCACGGAAACCATAAAAATCGAGGATTCCGATTCATACGACAATACCGGCGAGTATCTCACGAGATTGGCCCTGCTGAAGAGAAAATGGGAGCTAGCGAGGAGAAAGAAGGAAACACTGAAGCGCGAGCTTCGCGAATCTTATGCGGAGggaaatatggaaaaattgtttcgCGTGCTcggcgagagagataaaaatttgtcGGATTTTCAGGATTATCTGAAACAGCGTCGTATCGTCATAACTCGGCTGAGAGACGAGGACGTCATATCGCTCTACGAGGATCGTAAAAATGCCGCAGCGACGAAGAAAAATCTTCCCGATCTCATCGACGCTGCGACCCCCGTCGATTACATCGAAACGGAGAATTATCTCGAGTGCGATTATTGTCCCTCGACGTTTTCCCAGCGCGATCTTCTCGAGGAACATCTCAAGTGCCACGATTATCGTTTGATGTACTGGTGCGACGATTGTCGCTTGGAATTTCCATCGATCAAGAGCAAGCGTGCGCACAATGCCGAGTGCGTGAAAAAATTTACCTGCCGTTATTGCGATCTGTTGCTTGATTCGCGCGGCAAAAAGAGACAACACGAGCAAAAACACGTTGACGACATGCACGGTCAGCTGTGCGACGTTTGCGGCGAAAAATTCAAGCATCAGGCTACCCTCGATCAGCACTTCAAGACTCGTCATATGATCTGGGAAAAGATTTATCAATGCCCGAAATGTCCGAAAAAATTTGCATTCAAGCAAAAACTTACGTTTCATCTTAAATCCGTGCACACGACGTCGCGCGCCTGGTTATGCGAGGATTGCGGCGCTGATTTCAAGAATCCGGCGAGCCTGCGTCATCATCGTATAAGAAAGCATCATCCGACGGGCAACAAGCGAGAGTgcaaagtttgcaaaaaattgaTACCATTTTATAGTTTATCGAAGCACATGTATACGCACAAAGCATACACGATACAGTGTCCGAATTGCGACAAAATGTTCAAGAATAGCTCGACACTGAAGCAACACGTTAGAATACACGAGGATCGTCGTCAGTACAGATGCGACACGTGCGGGGTCGGTTTCAATCGTCGCGACGGTCTTAAGCTTCACATGAGGGTACACCAGAAGAGCGACAGTCGTTCGCTGAAGGAATGCTCCTGTCAGATATGCtcggaaaaatttccaaatcatTCGATGCTCGTTATACATCGAAATCGCGTGCACAAAGATGGCAAACAATTCACGTGTCGCATATGCAACAGATCGATGCTATCGATAAGATCGCTCGAGTGGCACATGTCGCATATACACAATATCGCAGCAGGCACGGATGATAACGTGAAGGAAGATACGGAGGTGGCGCAGCCGGAGAAGAAGCGAGTCGCGTGCTCGAATTGCGAGAAAACATTCAAAACGGAAATGATACTTCGTACGCACATAAAGAATACGCATATCGTGAAGAATCCAACGAAATGCCTCGATTGCGACGAAACATTCGTCTCGAATGTACGCCTGAGGCATCACATGATGATTGCTCACGATCGTTTGGAGGGTACGCTCAAGTGTCCTCATTGTCCCAAACGTTTCGTAAATCAGCTGCGTCTTAAGACACATATGATATCGCACTCGGAGGACAGGCCTTATACATGCGAAATATGTGGCTTTAATCTTAAAACTAAGATACAGCTTATAAAGCATCATCAGAATCGTCACAGCGACGAGAGACCGCTTCAGTGTCGCTACTGTCCCTGGCGATGCAAACAGGTCAGCGCTCTTGTTTGTCACGAGAGAACGCACACGAACGAGCGACCGTATTCGTGCATGGTCTGCCGGCAGAGATTCAAGTATCTCGGCGACAAGAACAAGCACGAGAGGCGACACGAGAGCCTCGGCGGCGCGGGATTCAAGAGAATCGTTGCGGGCAGAAATCTGAGGCGTACGCAGCGGGCCAAGATGAGGAACGACGAGACATCGAACTCGGAGCAGGAGGAGCACGCGGATTATGTGAATACGGACGAGGCGGAGCGTAGTATTATCGGGGAACAGCGCTACGACGACGAGCAGCGGGACGAGGCTTACGGGAGTGTGAAATTTCACGAGGAGGAAATTGTTAAATTCGAGAACGCCGACATGACGGAGGAGTACGAGGAAAATTACGAACAGGAATACGAGGAAACTTCGAGAGAAGCATCCGAGGCTGCCGAAGTTATAATGAGCATGGAGGACACGACCGTGTACACGGAGGAAGTTACGGCTGAGAATATCGAGACCGCGGAAATGATAACCGACGAGATGATTACCGGTGAAATGTTGGAATCCGACATGACCGTAGTTCATTTGCAGCAGCATGACGATTCCGGTAAAATTCAAGTAATACCAGTTATGCTGTCGCTTCCCGATCTTAGCGACTCGAGTGCCGAAGTTAATCTCGCCACAGCATCGATAATGTACAATAATTGA
Protein Sequence: MSESTESVLYFGAEGNDNNGTSVVDNLNDDTSAHEALIRDLTSESIVMLDDVLCENNRTLDIAASNDNARSNVFSVGGNVIQEYSIVGMNPDSMQKQAKSCPSFATKSIKRDHDSGDARRFLDLDKPLKIFDKNDCTIIRNNSVSLFRGAKRAMPPSTQEKSIARVKNISELKKVTPRVKLVAPETTTSLAKLTGINITSGIKTKDSSSREIAKREQLNNYCRTCAGLKLPLVDIFSEKGAQMRLNQQMKHLKDIKENDGMSTKMCMDCICDLKMSYKFFMQINKAQIKLQTISAASSDENKAAARVRPNNENDGSRSIATICLAESPERTSCKAKKIDSPRSQNTRNPTNFEIISNEQTLAEKTNDNEARVKIEPRIDESCALQISDDSIEEFDPDDPSFRDDLPGFVKEIPKNFHETEITQCENTLSLIDENPPPVPFVPIPELKTEQKSDTSQDPNKMVYRYDENLKAYVKVETTSEENKIDPSDDTVIDTAQLLANERSDNEAKSSGCKDIAKSLNILKRKSSVNFLENPVARVKRSDSTCARSGKRGDSKRPKLNVKNALNVTSVNEDGIMYVTVKGTKPNELLLVKVKKMEKTLDNANKKDGARKQRTSDGALTVDEILKKLEPVIKKETEYRVERSRILDNREKSIAQQIEDYKRKREKILGGSSGVPNALKFEDGMIRFVNPIETKTCPIGDDDDDAVRVKIEPSEKIEPSEKIEPSEKINDTTDPSASPSIDRDVSPPTNQETTTETIKIEDSDSYDNTGEYLTRLALLKRKWELARRKKETLKRELRESYAEGNMEKLFRVLGERDKNLSDFQDYLKQRRIVITRLRDEDVISLYEDRKNAAATKKNLPDLIDAATPVDYIETENYLECDYCPSTFSQRDLLEEHLKCHDYRLMYWCDDCRLEFPSIKSKRAHNAECVKKFTCRYCDLLLDSRGKKRQHEQKHVDDMHGQLCDVCGEKFKHQATLDQHFKTRHMIWEKIYQCPKCPKKFAFKQKLTFHLKSVHTTSRAWLCEDCGADFKNPASLRHHRIRKHHPTGNKRECKVCKKLIPFYSLSKHMYTHKAYTIQCPNCDKMFKNSSTLKQHVRIHEDRRQYRCDTCGVGFNRRDGLKLHMRVHQKSDSRSLKECSCQICSEKFPNHSMLVIHRNRVHKDGKQFTCRICNRSMLSIRSLEWHMSHIHNIAAGTDDNVKEDTEVAQPEKKRVACSNCEKTFKTEMILRTHIKNTHIVKNPTKCLDCDETFVSNVRLRHHMMIAHDRLEGTLKCPHCPKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCMVCRQRFKYLGDKNKHERRHESLGGAGFKRIVAGRNLRRTQRAKMRNDETSNSEQEEHADYVNTDEAERSIIGEQRYDDEQRDEAYGSVKFHEEEIVKFENADMTEEYEENYEQEYEETSREASEAAEVIMSMEDTTVYTEEVTAENIETAEMITDEMITGEMLESDMTVVHLQQHDDSGKIQVIPVMLSLPDLSDSSAEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -