Rexs007375.1
Basic Information
- Insect
- Rhorus exstirpatorius
- Gene Symbol
- ZFX
- Assembly
- GCA_963564615.1
- Location
- OY751315.1:17685682-17692578[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4 1.4e+02 3.6 0.1 3 23 16 36 15 36 0.94 2 15 9.3 9.2e+02 1.0 3.7 1 23 951 974 951 974 0.79 3 15 0.013 1.3 10.0 0.4 2 23 1087 1109 1086 1109 0.95 4 15 0.0036 0.36 11.8 0.1 2 23 1122 1143 1121 1143 0.97 5 15 2.8e-05 0.0028 18.4 1.4 2 23 1146 1167 1145 1167 0.97 6 15 0.014 1.4 9.9 0.3 1 23 1173 1195 1173 1195 0.95 7 15 2.8e-05 0.0027 18.4 4.5 2 23 1202 1223 1201 1224 0.95 8 15 0.12 12 6.9 3.7 5 23 1237 1255 1236 1255 0.97 9 15 2.5e-05 0.0025 18.6 1.5 3 23 1262 1283 1261 1283 0.97 10 15 0.014 1.4 9.9 0.5 2 23 1299 1319 1298 1319 0.97 11 15 7.5e-05 0.0075 17.1 0.7 1 20 1325 1344 1325 1347 0.92 12 15 0.00013 0.013 16.3 2.9 1 23 1355 1377 1355 1377 0.99 13 15 0.0026 0.26 12.2 3.2 1 23 1383 1405 1383 1405 0.97 14 15 4.8e-06 0.00047 20.8 3.9 1 23 1411 1433 1411 1433 0.99 15 15 0.00034 0.034 15.0 7.2 1 23 1439 1461 1439 1462 0.96
Sequence Information
- Coding Sequence
- ATGGAAATGAGCAATGTCGCGACATCCGGCGGCGGGGCGGTCGCCTGTCCCGTCTGTACCTTATATTTGCGCGAGGGTATAAGCCTTCAGAGGCATTTGGACACTCATCCGAAGGAGCAGGTCATAGAGGCTCTGATAAAAGCGAGCTCTTCGTCTGCGCCTTCGCCGTCCGCGCCGTCGCCGTCGCAGCCGACGTCGCAATCGAATTTGTCGCCGAGCGCGAATTCCCAGTCTCAGCAACAATTGAACGCCGGCCCTCAGTTATCCTCTCAGACTCCCTATCCGGTCGGTCCCGTCTACGAATGTCCGCCCATAAATACGATGATGCCGCCGCAATTCGCCTCGTTCAGTTATCAGCAATTCGTGAACAACGGCACGATGATGATACCCCAGTACGCCATGGCGCCTCAGGCAAATCAGATGCAGATGCAGATGCTATACAATCCGTACGGCATGTATCAGCAGCAGCAGATACCTACCGTACAAATGATATCGCCCATAACCGCCATACCTACGACGAGAATAAGGCCCGTCGTCGGCGTAGCAGGCGAGGTCAGCGCCAGAGGTATAATGGAACGATCGAGCTCGCCGAAGCAACAGCTGACCGCGGAACTTTCGTCCGAGCCCGAGGCCGAAAGAATACTGCCGGATATCGAGCTGACTAGCGATGAAACATCGACGAATCGTCGCGACGATCGAGAAATGACGAACGAGCCGGCGGGGGAGCACAGAGGACAGCAGACTCAGAGTATCATGACGACGAGGAGAATGAGCTCGGAGCGTCGGGATTATCGTAGAAATTCGCAGGATTCGACGAGCGAGAACGGCGAATCGAGTCCCGTACTGGATGACAAAGCGGAAGCGACGATGGGCGTCGTTGATACGCGTGAGATCGAGGAAATCGGCGCCGTGCGAGGACAGCGCAAGATCGCGAATTACGGCGAGACGCGTGAATTCGAGGAGATTTACGTGAACGAGATCGCGAAAACGAGgaacagcggcggcggcagcggcggcggcagcggcggcgaGACGGAGAGcgaggagagaaagagcgaaacGAGAGAAACGTCGACGGATCGAAAGAACGTTCGCGACGAGACTGACGTAGGCGGTGACGAGGACGGCGGCGCGGACGAGACGAAGATAACGATACAGCCGGAGGTCGAGCAACTCGAGAGATTGCTGATAACGATAATGGAATCGAGCTTCGACGAGGCGACGATCGGCGAGGAAGACGATGCGGCAAGAGCGAtgagcggcggcggcggcggcgcgAGAAACGACGACGAGCGAGACGGCGGCTGCGGCGATGACGCGACGGAAGGGACGAGCTCCGATTGTCCCGAGAGCAAAAATATGAGCGACGATACGGCCAAGATGTACGAGAACGACGAGTCGGAGAACGAGGCATCGTCGAAGAACATCGATATGAGCTACGAGAGAATCGAGGATTATgcggaaaattttgataatccGTATCGCTACAGATGCAGCCTCTCCGCGCCAAATTCACCCGTGATCGCTGATAAACCACGACGAACGTATTCCCTTCGCTCGGATTACGGCTCGAGcgaaaatctcaatttttatcCCGTCGGTTTCGATGCCAGCGCCATGAACGAGCAGCgcgacgaggaggaggaggaggcggaggtggaggaggaggaggaggaggaggaggaggaggcgaAGAACATGGAGGATAATTTCGACGAGGAGGACATGGAAATCGAAGAAATGGCGAGTCCGCATACGCCATGCGTGAAGAAAAATGACGATCCGGAGTCGGGAAGATCGCGAACGCCTCTGTCGGCGATAAGCGGCATTTCCGGGTTACGACTGAAGAATGATTTCTCCAAGGATTGCTCGAACGACTCGGTGCGATCTTTCTGTCCCATGGACACGGCCAGCACGAGCggcgaggacgacgacgaggaggaagatgacgaggacgaggaggaggaggaggaggaggaggaggaggaagaggaagacgaggacgaggaagaggaagacgaggaggaggaagacGGGAGCAACGATTCGATCGATTCGCTGATGAAAAATCCCGTTAATCGCGCGTTAAACGAGGATAACGCGAGATCCAACGCGCGGTTGGCATCGCCGAACGATAGCGTGGATCGCAAGATCGAAAGCGGCCAGTTGTATCATCAGTCGGTGATAACGGAGCACGTGAGCTCTTTTGCGACGATGAATTCGCAGCagccgatgatgatgatgcacGATGGTTATTCGCTATCGAGCAACAAAACGTTGCGCAATAATTTGATGAATCTAACGGATATTGGCGATCCGACGACGAGCGCCGATACGAAGAGCTATCGGGGAACGAAAATAATTAATCACATGCCGTCGACCGAATTATTGAATATCAACGAGGACGCCCACGCCGGACCCATGAACGTTTTCGAGTTCGACGGACTGCAAATATTAGTTCCTAGTACATTCATAAGTGAATCGTCGCAGAAGGCCATAAGCGCGACGAGCCGTCAATCAATGGCGAGCAGCGAGGGCGGCGTCGGCATCGACGAGGAGGTAAAGAGCGTGAATATGCGCGCCGACGAGACAATGCCGCCTCGCGGCGAATTGTCGGAGCAGGAGAGCAACGGCTGTACCGAACATTCGGCGTGGCAGCTTTACATGGGCCAAGAATCATCGCGCATGTCAACGTCATACGATCTGATGGCGCGCGAGAGCTGGGAAGAATCCGAGGGTTCGGAAAACGAGGCAGGCGAGGTGCCGCTGCTCGACAGCCGATCACTCGCCACGCACTTTACGTCGAGCCTGTTTCTCGATCGCGATCGTAAAATCCCGACGAAGCGCACGTTCAAGTGTTCACACTGCAGCGAGATATTCGATTGTCCGAAGGAGCGCAGGGTTCACAGTACGACGGTACACAAGGAGGCAGGACCCAGCGGAAGTAGCAGCAGCAACGATCCGACGAATCCATTGGAAACGAAGGACATAAAACTTTTGGACGGACGTATGAATGTCTTCGATGATATATTCGTATCGAATATACACgttcaacagcagcagcagcagcagcagcaaccgCCGCTTTATCATCAGCAGCCGTTGTTGCATCAGTTGcagccaccgccgccgccgccgccgccgccgcctccGCCGCCGCTGCTGCCTCCTCAGCAGTCGTCTCAGAGAACGGAAAATACAAAGTCAGAGGCAGATCGGAAGATCGATAATCTCGCGATACCCCAAAATTTGGATATCTCATGCGCCATGTGCAGTCAGCGCTTCGCCAGCGAGAGATCCCTTCAGTTGCACAACAGGCGAGTTCACGGCACCGAGGTTGCCCGTAGATTGCAAGAAATATCGAAATGCCAGATATGCAACGAGGAATTTCCATCGGTAATGCTTTTCAATGCTCATCTCAAGATACATCCCCTCGAGTGCGCTCAATGCggcaaatatttttatcgcaagCCAAACTTCAAGCTTCACATGAAGCGTCATCTCGGCATAAAACCATTTCCCTGCACCGTATGCGACAAGGCTTTTCTCACAAAGCAAAAGCTCGACGAGCACACCAACGGCCATACCGGAAATGCACCCGTAAAATGTAATCTCTGCAACGAGACATTTCGACGCTATTCGAATCTTACGCAGCACAAGAATCGTCATCATCTAAATATAAAGAGAAAATTGAAGGATTATATATGTCATTGCGGCGAAGTTTTtcatacgaagaaaaaattggCCTGGCACAAGGAGACCCACGATGAGAAACCAAAAGCTTGCACCTATTGCAACGAAAGATTCATACACATGGCGAGTCTTACGAGGCACATGAGACGAGCACACAATCGTCGCTTCGTGCCCGATGCTCAGCGCGAAAATGAAAATGTCGAGTGCCCGATATGCAAATGCATTTATCTACGCTCGTCTCTCTCGGTTCACATGAGAGTACACAATGGCGAGAGACCCTACGAGTGTCAGGTATGCTCGAAAGCTTTTTCCACAAAATGGAATCTTCAGTTGCACAAATGGACGCACGCGGCGCGCAGCACGAAACCCTTCAAGTGCACCCAGTGCAGCGCTGCATTTTATCGTCACAGCGATTATACGGCTCATATGAATTCGCATCGAAACGTACGACCGTACACGTGCAATTATTGCGGCGCTCAGTTCATAAGAAAGTACAATTGTCTCAGACACGTTAAAGAGCACGAGGAGACGAAATCTTATACGTGCGACGTGTGCAACAAAACGTttcatcgttcgtattatctgAAGGAACATTTGCGGGTACATTCGGGGGCGAGACCCTACACGTGTCATATATGCGGCAAATCGAGCAGCACGAAATCCAATCATAACAAACACGTGAGAATTCATCATGCGCGTGAGCCTGTAAATACGGAGAATTGA
- Protein Sequence
- MEMSNVATSGGGAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASSSSAPSPSAPSPSQPTSQSNLSPSANSQSQQQLNAGPQLSSQTPYPVGPVYECPPINTMMPPQFASFSYQQFVNNGTMMIPQYAMAPQANQMQMQMLYNPYGMYQQQQIPTVQMISPITAIPTTRIRPVVGVAGEVSARGIMERSSSPKQQLTAELSSEPEAERILPDIELTSDETSTNRRDDREMTNEPAGEHRGQQTQSIMTTRRMSSERRDYRRNSQDSTSENGESSPVLDDKAEATMGVVDTREIEEIGAVRGQRKIANYGETREFEEIYVNEIAKTRNSGGGSGGGSGGETESEERKSETRETSTDRKNVRDETDVGGDEDGGADETKITIQPEVEQLERLLITIMESSFDEATIGEEDDAARAMSGGGGGARNDDERDGGCGDDATEGTSSDCPESKNMSDDTAKMYENDESENEASSKNIDMSYERIEDYAENFDNPYRYRCSLSAPNSPVIADKPRRTYSLRSDYGSSENLNFYPVGFDASAMNEQRDEEEEEAEVEEEEEEEEEEAKNMEDNFDEEDMEIEEMASPHTPCVKKNDDPESGRSRTPLSAISGISGLRLKNDFSKDCSNDSVRSFCPMDTASTSGEDDDEEEDDEDEEEEEEEEEEEEEDEDEEEEDEEEEDGSNDSIDSLMKNPVNRALNEDNARSNARLASPNDSVDRKIESGQLYHQSVITEHVSSFATMNSQQPMMMMHDGYSLSSNKTLRNNLMNLTDIGDPTTSADTKSYRGTKIINHMPSTELLNINEDAHAGPMNVFEFDGLQILVPSTFISESSQKAISATSRQSMASSEGGVGIDEEVKSVNMRADETMPPRGELSEQESNGCTEHSAWQLYMGQESSRMSTSYDLMARESWEESEGSENEAGEVPLLDSRSLATHFTSSLFLDRDRKIPTKRTFKCSHCSEIFDCPKERRVHSTTVHKEAGPSGSSSSNDPTNPLETKDIKLLDGRMNVFDDIFVSNIHVQQQQQQQQQPPLYHQQPLLHQLQPPPPPPPPPPPPPLLPPQQSSQRTENTKSEADRKIDNLAIPQNLDISCAMCSQRFASERSLQLHNRRVHGTEVARRLQEISKCQICNEEFPSVMLFNAHLKIHPLECAQCGKYFYRKPNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKRKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLSVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCTQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEETKSYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -