Basic Information

Insect: Rhorus exstirpatorius
Gene Symbol: -
Assembly: GCA_963564615.1
Location: OY751316.1:34241966-34253331[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.8e-05 0.0027 18.4 0.7 1 23 146 168 146 168 0.95

2 15 0.001 0.1 13.5 1.1 3 23 176 196 175 196 0.99

3 15 0.00014 0.014 16.2 0.1 1 23 346 368 346 368 0.98

4 15 0.27 27 5.9 0.1 1 23 374 397 374 397 0.96

5 15 9.1e-05 0.009 16.8 1.8 1 23 427 449 427 449 0.98

6 15 1.9 1.9e+02 3.2 0.0 1 23 465 487 465 487 0.86

7 15 1.3 1.3e+02 3.7 0.3 2 23 494 516 494 516 0.94

8 15 0.0025 0.25 12.3 2.8 2 19 524 541 524 545 0.95

9 15 0.00021 0.021 15.6 3.5 3 23 553 573 551 573 0.97

10 15 0.015 1.5 9.8 0.1 3 23 580 600 579 600 0.97

11 15 8.9e-06 0.00089 20.0 0.4 1 23 609 631 609 631 0.98

12 15 0.0039 0.38 11.7 0.2 3 23 639 659 637 659 0.97

13 15 0.0034 0.34 11.8 0.2 3 23 667 687 665 688 0.94

14 15 0.15 15 6.7 0.0 1 23 702 724 702 724 0.93

15 15 0.13 13 6.8 0.0 1 20 1137 1156 1137 1159 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.8e-05	0.0027	18.4	0.7	1	23	146	168	146	168	0.95
2	15	0.001	0.1	13.5	1.1	3	23	176	196	175	196	0.99
3	15	0.00014	0.014	16.2	0.1	1	23	346	368	346	368	0.98
4	15	0.27	27	5.9	0.1	1	23	374	397	374	397	0.96
5	15	9.1e-05	0.009	16.8	1.8	1	23	427	449	427	449	0.98
6	15	1.9	1.9e+02	3.2	0.0	1	23	465	487	465	487	0.86
7	15	1.3	1.3e+02	3.7	0.3	2	23	494	516	494	516	0.94
8	15	0.0025	0.25	12.3	2.8	2	19	524	541	524	545	0.95
9	15	0.00021	0.021	15.6	3.5	3	23	553	573	551	573	0.97
10	15	0.015	1.5	9.8	0.1	3	23	580	600	579	600	0.97
11	15	8.9e-06	0.00089	20.0	0.4	1	23	609	631	609	631	0.98
12	15	0.0039	0.38	11.7	0.2	3	23	639	659	637	659	0.97
13	15	0.0034	0.34	11.8	0.2	3	23	667	687	665	688	0.94
14	15	0.15	15	6.7	0.0	1	23	702	724	702	724	0.93
15	15	0.13	13	6.8	0.0	1	20	1137	1156	1137	1159	0.93

Sequence Information

Coding Sequence: ATGGATGTGTCCGGAGATTTGACATTGCAATGGGTGGAGGAGGTTGGAAATGTGATTCATGAGGAAGTGATATGCGGTTTGGAGGCGGAAATACCGGCAACCGAGGAAGAGGTGATCGGAGCATGCGAGGAGGTATCGATGGAGGAAACCGTCGAATCCGCGCAGGATCCAACCCCGACGGTTGATTCGGAGCCTCTCATGGTACCGCAATCCAGCGACATGGAATCGATCTACATAGTTCCCCAGGATCAGGGTCATGATTATCTGAATATTCAGGTCACAGAGGAAGTTATCACGGATAATTGGGACAGATCCGGTCCCGACGATggGGTCGAGATACCGGAGACAAAGGTATCGCACGACAATTTGCTCGAGTACGACGACATGGAGATACCGCTGCCGATAGATCAGGATTCTTACACGAACACGAGGCCATATCCGTGCGACTTTTGTAGTCGCAGGTTTCGCAAAAAGGCAAATTTAATGAATCACATGGTGGCCCATCAGACCGATCGTCCGCATGGCTGTAATCTCTGCGGTGCTCGTTACGTGAGAAAATGCGATCTCATGAATCATCTGAAGATTCACGCGTATGCGCCGTCGCGCGACGGCCTCGAGGACGATATAAACGATGACGATTCGTTGGCGCAGGACGACGAGGATTCGACAATGACGacggcaacgacgacgacgacgacgacgacgacgacgacagcgGCGGCGACGGCGAAAGGCCGACGCAAGAAGGTACAATCGAGCGCGCCGCGTAagcgtaaaaataataatgccgcGGCTAAGCGCAACAATCAGCACGATGATACGAGCCGAATCATCGAACCGAGCAAATCATACGTAAATAAATCGTACGATTACGTTGACGAGGATATGAGATTGTTGGAAGAAATGACGAGTCGAAGCACTAATGTACGCGCAAGCGGTAATTATGCCACGAGCTCGAGATGGACCGAGCACATGACGGGTATCGACAAAGAGCCGCAATCGCCTCGTTGGCCGATAACCGATCCGACGAAACCGTACGTTTGTCAGTACTGCGGTGTCGGTTTTGCTCGTGAAAAAGCCCTCGCATCGCATTCCCGCATACACGGCGGTGATAGCCCATTCGAGTGCACGAATTGCGGCGATATGTTCTGGGACGTAAATGCATTGCGGGAACACGTGAGAATAAAGCACGGCGGTGGTCCGCCGTTGCCATCGCCGAGCGATGAATTCGATCCCAATGACAATACAACGTACACAGGTGACGAGAGATTCGGCGAATTTTACTGTGATACATGCGGCGTACCGTTTCATCGCTTGGATCTTCTGAAGCGTCATCGAAAAATACACGTTAAGCAAGAGGTCACCGACGTGATGGACGGACCGAGTCAGCATCACGTTTGCAACGTCTGCGGCGAATGGTTCGAGGAAGCTCTCGCCCTGTTGGCCCATGCTGAATTGCACGCGAGATCGCCGGCTCGGCGATGTTTACTGTGCGGCGAGCAATGCCGCGACGACGCCGAGGTAGCCGAACACGTTAGGCAGAGTCACGCCGAGGACGCGCCACCGAATACCTGCACGATGTGCGGTAAAACTTGCAAGGACAAGCGAAGTCTGTTGAAACACTCGTGGGTACACAATGCCGACAAGACTTTCGGTTGCACAAAGTGCGGCAAGCGTTTTCACAGCAAAGCTCGTCTACGAAGACACATGGTGTCACATCGCAACAAAATGGTGGCATGCGACGAGTGCGGCGAGGAATTTCCCGATGGCCGGGCTCTCGTGAGTCATCGTCATTCGCACAACAAGGATCTCGGCGGGCGTTCGTTTCCTTGTCGCGAGTGCGGCAAAACGTTCGGCAGTCGTAGCTCCCAGCAGATTCACATACGCATACACACCGGCGAACGACCGTACGGCTGTAGATTCTGTTGGAAGGCATTCGCGGACGGCGGTACATTGAGAAAGCACGAGCGCATACACACCGGCGAAAAGCCTTACGGTTGCGCGATATGCCCTCGGGCCTTCAATCAACGGGTTGTTCTTCGTGAGCACGTGAGGGCTCATCATTCGGGGCCCGATCCAAAGTGTCACGGTAGCATGACGCCTTATCTGTGCAAGGTATGCGGCGATTCTTACGCAACGTCGGAGGAGATCGTCGCTCACATTGTTCAGCATTGCGACGACAATACAGCGTTGCGTCGTCAGCCGCAGATAGGACCGAGAAAATACAAGAGAAGACGCAAGCTCAAGCAGCACGATCAGCCGACGATCTCGTTGCCCGCACGCGCGGCGCTGAGCGATAGTTTCGGTGTTCTCGAGGCGGCCTCGGACTCGGATGACAACACGAAGCGAAAGCTCGGCCGTAAGAACAAGCAACGCTCGAGCGTCGAGGACGGTTATCAGAGCGTACTGAAGAGTTTCGAGTCGTCGCTGCAGAATATAAATTCGATCGTTAGCAATACGAAGCTCAAGCCGTCAAAATCgaaggtggggaaaaaaaatgcgaaaagcAGCAAATCAACGAGCGTGAACGAGGAGAAAAAAGCGGAAACGCAAACTTCGGGACAGCCGGGACGTCCGAAGATGATACACACGCAAAAGACTCGCGTGCCGGTTGAGATGGGCACGGATGGCGTTAAGAAGggacaaaaaacgaaaacaatgGTAACGAGAACACCGAAAATGATGCCGAATGAGCATAAGATCGGTATGTTTGCCGGTGGTGAGAGAAATCGTCCGAGAACGAAGAACGTGAGTTATCACGTCGAGGGTAGATTGCAGCTTGCCCCGGCTACATTCCCAAAACAACAGAATGACGATGAAACGACGCTTAACGAGGTCCCGGGTATCTCGAATAATGAACAAACGACGGAGACAGCGATGACACTGACGAAGATTGGCCAGCAAACGGGAATGAAACGCGCAGCAGCGAGTAATCACGCCAACAACAACAATGGCAGTATCTTGCGGATGAatgataaaacggaaaattCCGTAACACCGAAGAAACGCGCTGCGGTCGGGAAGAGAGCGAAGAAACAACAGAAACAAGTTACGATAAAGCAAGAGCCGATCGAGCAACCGGATGAAAATGATATGGAAATACGCGATAACAATAATTCCGGTGATATCATGAATTCCAGTAGTTTCAGCATCgatcaacagcagcagcagcagcttcACGATGGTAATATACACTTTGAGCCGAGAATATTGAATGCTCGCGAGGAATCGATATTGCCCGATCTCGATGATGACATTGATCACAGTCGTGGTATCgttaattcggaaaaaatgaaGATAAGCCTCAAGATCGAGGCGGCAACACCGAGAATGCTCATAGAACCTCGCGGCGTAACTATAACACCCCCGGAGGATATACCGGAAACCATAATACCCGATACGCTCGAGTATACGTGCGAAATGTGCGCCGCAGTTTTCGGCAGTCGGGCCGAATTACTCATACACGTACCTATACACATTTGA
Protein Sequence: MDVSGDLTLQWVEEVGNVIHEEVICGLEAEIPATEEEVIGACEEVSMEETVESAQDPTPTVDSEPLMVPQSSDMESIYIVPQDQGHDYLNIQVTEEVITDNWDRSGPDDGVEIPETKVSHDNLLEYDDMEIPLPIDQDSYTNTRPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGARYVRKCDLMNHLKIHAYAPSRDGLEDDINDDDSLAQDDEDSTMTTATTTTTTTTTTTAAATAKGRRKKVQSSAPRKRKNNNAAAKRNNQHDDTSRIIEPSKSYVNKSYDYVDEDMRLLEEMTSRSTNVRASGNYATSSRWTEHMTGIDKEPQSPRWPITDPTKPYVCQYCGVGFAREKALASHSRIHGGDSPFECTNCGDMFWDVNALREHVRIKHGGGPPLPSPSDEFDPNDNTTYTGDERFGEFYCDTCGVPFHRLDLLKRHRKIHVKQEVTDVMDGPSQHHVCNVCGEWFEEALALLAHAELHARSPARRCLLCGEQCRDDAEVAEHVRQSHAEDAPPNTCTMCGKTCKDKRSLLKHSWVHNADKTFGCTKCGKRFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNKDLGGRSFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKCHGSMTPYLCKVCGDSYATSEEIVAHIVQHCDDNTALRRQPQIGPRKYKRRRKLKQHDQPTISLPARAALSDSFGVLEAASDSDDNTKRKLGRKNKQRSSVEDGYQSVLKSFESSLQNINSIVSNTKLKPSKSKVGKKNAKSSKSTSVNEEKKAETQTSGQPGRPKMIHTQKTRVPVEMGTDGVKKGQKTKTMVTRTPKMMPNEHKIGMFAGGERNRPRTKNVSYHVEGRLQLAPATFPKQQNDDETTLNEVPGISNNEQTTETAMTLTKIGQQTGMKRAAASNHANNNNGSILRMNDKTENSVTPKKRAAVGKRAKKQQKQVTIKQEPIEQPDENDMEIRDNNNSGDIMNSSSFSIDQQQQQQLHDGNIHFEPRILNAREESILPDLDDDIDHSRGIVNSEKMKISLKIEAATPRMLIEPRGVTITPPEDIPETIIPDTLEYTCEMCAAVFGSRAELLIHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01057843;
90% Identity: -
80% Identity: -