Rexs009765.1
Basic Information
- Insect
- Rhorus exstirpatorius
- Gene Symbol
- -
- Assembly
- GCA_963564615.1
- Location
- OY751316.1:22454463-22475404[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 7.9e-06 0.00078 20.1 1.0 1 23 227 249 227 249 0.98 2 31 0.0034 0.34 11.9 1.9 1 23 272 295 272 295 0.96 3 31 0.00025 0.025 15.4 0.5 2 23 302 324 301 324 0.96 4 31 0.00024 0.024 15.5 0.4 1 21 344 364 344 365 0.95 5 31 0.00027 0.026 15.3 0.3 2 23 462 483 461 483 0.96 6 31 0.073 7.3 7.7 0.3 1 23 489 512 489 512 0.91 7 31 0.00015 0.015 16.1 0.1 1 23 573 596 573 596 0.96 8 31 0.0031 0.31 12.0 0.6 1 23 602 625 602 625 0.96 9 31 0.15 15 6.7 1.5 1 23 638 660 638 660 0.97 10 31 4.1e-05 0.0041 17.9 0.2 3 23 705 726 703 726 0.96 11 31 0.058 5.7 8.0 1.1 2 23 789 812 788 812 0.93 12 31 7 7e+02 1.4 0.0 2 23 821 843 821 843 0.83 13 31 2.1 2.1e+02 3.1 0.3 2 23 850 872 849 872 0.92 14 31 1.6e-05 0.0016 19.1 1.2 1 23 880 902 880 902 0.98 15 31 0.12 11 7.0 0.5 2 23 935 958 934 958 0.87 16 31 0.00026 0.026 15.3 3.3 1 23 961 984 961 984 0.97 17 31 0.029 2.8 8.9 0.7 2 23 991 1013 990 1013 0.95 18 31 0.0038 0.38 11.7 4.5 1 21 1047 1067 1047 1068 0.95 19 31 0.0034 0.34 11.9 1.8 2 23 1082 1103 1081 1104 0.93 20 31 0.17 16 6.5 1.1 1 23 1107 1130 1107 1130 0.95 21 31 0.0051 0.5 11.3 0.8 2 23 1137 1160 1136 1160 0.93 22 31 3.8 3.8e+02 2.2 0.2 2 23 1168 1190 1168 1190 0.94 23 31 4.6 4.5e+02 2.0 0.0 2 23 1197 1219 1196 1219 0.87 24 31 0.14 14 6.7 3.0 2 23 1228 1250 1228 1250 0.96 25 31 3.3 3.2e+02 2.5 1.0 2 23 1256 1278 1256 1278 0.90 26 31 5.9 5.8e+02 1.7 0.7 1 23 1345 1368 1345 1368 0.87 27 31 0.012 1.2 10.2 1.8 1 21 1403 1423 1403 1424 0.95 28 31 0.57 56 4.9 1.4 2 23 1529 1551 1528 1551 0.94 29 31 0.047 4.7 8.3 0.6 2 23 1558 1580 1557 1580 0.95 30 31 0.87 87 4.3 2.5 1 23 1591 1613 1591 1613 0.97 31 31 0.18 18 6.4 0.2 3 20 1622 1639 1622 1641 0.94
Sequence Information
- Coding Sequence
- ATGGAGCCGTccaaggaacgttacaacgagcTTTGCAGGCTCTGCGCTTCTTACGACGCCGTTAAAATGGATATATTCGGTAACGAGGGGAAGAATCGTCAGCTCGTCGACAAAATACAGACTTGCCTACCGTTCAAAATTGCCGAAGATGATCGGCTGCCCAAATGTCTGTGCTATCGGTGCATGtacaatttggaaaatttttacgactTCAGAACGGCCTGCGTGAATGCCGTAGCTCTTTTAGAGAGGTATCTACCACCCGCTAACAATGCCGCTGGCGAAGAATTGGAAAATGGGGTTGAAAGTTATTCGGAATTGCGGACGGAGCTTCTCAAGGAGAAGGAGAAGATGCCTATACTCATACCCGAAGCCCCCATAGTGAATCCAAACGCGGCGCTTGGCACACCACCGAGATTAAATTCCGACGGTGAGGCTGATCATGAGATCGAACAGATTCACAACGTTTGCGGCACCGAGGGGGGCTTCGAGGATACGGAAGATCGTAAATCGGACGAATATGAGATGGACATGGAGACGAATCCGAGCGATTTTTTAGAAATGACGCCGATGGTAACCGAGGAATTGGAggataataaaaatacaaaaaagtcgCAGAAATCGAAGACATCGAGAAATACGGAAATTTTTCAGCACACGTCCGAGCAACACGAGGTATACGTTTGCTCGTTGTGCAACAAGGCATTCAGTTCCAAGGGTCATTTATCGTTGCACGCGAGAATTCACGTTGGCGCGGGTGACGTTATCGGGGCAAAAGTCGTCACCGACGATCACACCTCGTACAAGAGGCCTTATCAGTGCGATCTTTGCAATAAATCTTACTCGACCGCGAAGCATCGATGGGGACACGTTTCGACGACTCACAGAGGTCATCCAGCCGTGACGTGCGCCTACTGTTCGCGAATATATTCGACTCGAACGAATCTCGAGGAGCACATAAAATCTCGTCACACCGGTCTACCACCGCCCCCGGAATTGCCGGTTCCCTATGTACAGCCGGACAATCGTTACAAATGCAAAACGTGCCCGAAAATGTACACCAACGTGACGGATCTCAATAAGCACGGTCGGGTGTGCGGGGGCGATCGTACGAAGGAgaaatttagtaaaaaaattgcCCACAAGAGAAAGGGTCGGATCAACGCGTCGGAAATTTCGAGCAGCGACACCGACGACGACAGCAAGGATTACAGAAACGCCGAGGCGAAACTTTCCAAGAATCCTCAATTAACGATACTCAAGCAAGCGCTGACGAAAGGCGAAGGTCCTAAGAGAGATTGCGATGATAGAAATTTGTTGGCAAGTAAACCGGTTAAAGTAGCGAGGATAGAAAGTAACGAGGTTGAGCAGCAGAAGAGATGGTACTGCGAGATGTGCCCGAAAAATTTCACATCGGTGGACAAGCTCAAGGAACACGAGAGAATTCACGACGCTGAAAGGCCATACATTTGTATATTGTGCGAGAAAGATTTTGTCCTTAAGACATCGCTGAGCAGGCATATTTTATCGACGCACGGCGTTGATCCGAGTCCGATTCTCGAAAGTGACAAGTGCCTGAAGAAAACGGCGTTGTCGCAATCGTGGcgtaaaaaattaatgaaaccgGAGCTGCGAAAAGCCCTTAGAGAACCGACCGATTCGTCGGAGGACGCCGAGAGCAGCTCGCACGGCAATATGATCGAGATCGAGACGGTATTCGTGTGCGAGATATGTACGCGCGATTTCAACGATCGCGCATCGCTCTGGCTTCACATACGCGCGACCCACAAAGAATTCGCCGCTTTCGCATGCGGCGTTTGTCTCAAGATATGCTCCGACAATTCGCAGCTATTGAATCACGTTAATATGTATCACGGTGGCTCGAAATTACTGATATCCGAGCAGAGAAGATACAGCTGCACGATATGCGGCAGGCAGCATGattcgcgaaaaaaattgatcaccCATGTCTCGATACACAACGTTGATCCGGGCTACGATCCGGCGAGTTTCGTTCAGCTGAATAGCAATTATTACAACGAGAATTTCAATAGCAACGAGGTGAACGATCATCTTATGGACATCGATGCCGAGGACAGTGACAAGATCGACTGTTATATTTGTTACAAGTCATTCCCGAACGAGGATCAACTCATTCGTCATCAGCGAAATGCTCACAAGTCCGAGCCCGTGATCCCGAGTGCCGATTTGACGATACAGAGCAACGGTCCCGCGCCGGGAGTCAACGGTACCAAGGCGCAGTATCACTTGTTCTTCGTTTGCGAATTGTGCGGAAGCTCACATCCGAGCAAGTGGGAGCGTTGGCTCCACGTCAGCAGCAATCACAGCGACGATCCGTCGATGAGATGCGAGCGAGAGGACTGCGGCAAGATCTTCGCGACGAAGACTCTGCGCAACGAGCACGCTCAGCATCATCTTATTCAGGGCTCGTCGCCGAATACGTGCGAGGTTTGCGGCAAATTATGGGGCAGCCGGGTCGATTATTGGAAGCACGTGATGGGCGTGCACTCGGACACGGTGCCGCTGATATGCGGCGTATGCCTAAAAGTATTTCCCGACGTCGCGAAGCTCAGCTGTCACGTTAAAACGTATCATTGGCCGCTGACGAACGGTGACTTTAGCTGCGACATTTGCGGCAGGCCATATTCGAACAAATCGAAAATGTCGAGACACCGAAAGATTCACGGTACGGAGATCGACAGCGTTCTCGGCAATGGCCCAAACGATAATCACAGCGAGACAATTGCTACGAGCGACAAGAGCCCGACGGAGATCGAGCTGACGTGCGAAATGTGCGCCGGCCTTAGCTTCGAAAGCTGGGAAACATTGTGCAATCATCGAAGAATGATACACGGCCTTTTTCCCTGCGATCTTTGCAACAAATGTTACGGCAGAACGTCGCATCTGTGGAAGCACGTTAATCGGGTTCACAAAGGACACAAAGACGTTACGTGCCGTTATTGCATGAAAACTAGCGCATCAAAGGATCATCTTTTGGCCCACATAGCCAAGATTCATCGTTACGAGCCGGACGAAAATCACGAGATACGCGACGCAGCAGCAGCGGTGGCGACGAATTGCCCGAAACGAATGCGAATCGAGGATGGCGAGGGTATGCACAATTGCGACAAATGCCAGAAAAACTTTCACAAACGTTATCTGCTTCGTCGTCACATGAAAGGCTGCCAAAATTATCGCAAAGATCCGGGCGCATTGCTGACACGCTGTCGCGCCTGCGAGAGAATATTCAAGGATCGCGCTAGCCTGCAGAAACACATCGAGAATCATCACAGCGAGTACACGTGCCATTTGTGCAACGAGACCGTGACATCGAAACTCGGTATAATGACCCATAATCGCGTTAATCATCTTTATCATCCGGATTTGACATGTGAAAATGGCAATTGTAAGAAGCTATTTCGCACCAAAGCCGATCTCGAGTCGCATCGCAAGGATCATCGTTATCACAATACACCGAATGTCTGTGATTTTTGCGGCGACACGGTCGACAACAAGCTCAAACTTAAGATGCACGTTCTGTCGCTTCATCGAAACGAGATCGGCGTATCGTGCGGCGTGTGTTTAATACCGATGAAGGATCCGAAAGATCTGAAGAAACACGTCGAGGACGAGCACGAGGGTGTGCTTCACAAGCCAAACACGTGTCAGGTATGCGGCAAGCGTTACGCATCGAAATGGAAGGCATTCGATCATACGAAGAAGTGCCACGGCAAGGTGTTTCGTACTTGCAAACAGTGCCTGGCCGTATTCACGAGCGACACGGATATACGTCATCATTACGAGGACATGCACAACGTAACGAAGGATCAGCTGGCAGGTTTTGAGAATCGTCTTGACCCGAGAACCGATGATTGCGAAAATTCCGATATCGTTGTCAAAGACGAGCCCGAGGATTATGATTACGCGCATGAGACACCGAATTCCGCTGGTGTTCTCGGGCGCGATGATAATCACGATTGCAAGCGTCGGCGAAACAACAAACGCGACACCCACGACTGCGCGATATGTCCCGAGATATTTTTGAATCGCGAGACACTCGCCGATCATTGTCGCAACGTTCACAATACCGAGGCCGAGCGAATGTTCAAGAGGATAAAACTCGAGACTACGAGCGCGAATCAGGAGGACGGATGCGCCAAGCGAACGATGCGAGAGCGTGAAAATTTCGAGTGTAAGAATTGTGCCCGGCAATTTTGCACGAAAACATTGTTCTGGAATCATATCAATGTTTGCACGAGACGCGGCGCGATCGGCAAGGACGAGACGAGAACGGGATCCATGTGCTCGATACTCGAGGCGCAATTGAAGAATAACAATAGAATCAAGAAGGAACCGATGGAAATGTGCCTGAGCGAGACAAATTTGAATATACCGGATTTCAATCTTTTCGAGGATATAAATATGCAGCTGTCGGAACAAAAACCCATACCGAGCCTGATGCCGCTCTCGGAATTGCGCCTCGggggtataaaaaaattatcgagaaaagATACGAGAAAGGATTCGCGCAAGGTTTACGACGAATCGACGAATACCGTTTGTATATGCGAGGTATGCGGCAAACAGTGGCCGGCAAAGAAGCATCTGTGGCAGCATCTTATACGATTTCATCGTACCGAAGCGGCGGTAACGTGCGGCGTATGCCTGAAGCTATGCACGAATTATGAGGAACTGGCGAGACATCTGCGGGAGTCGCACGAGTCGATATTGTCGTGCGAGGGTAATAACTTTACGTGCAAAACGTGCGGACGTTATCACAATGCGCGGAGCAAATTATTGCTTCACATGAGCATACACATAAACGGAAATGGGATCGCGTGGTGCAAGAAATGCGAGCAGAGCTTCGAGAGCGAGGACAGGCTCAACGAGCATACGGCGATTTGCGACAAGAAGGAGACAATTTTCGGTGAGCACAGCGTTGACATTGACATGGATACGGATATAAAGATCGAGGACGACGATGACAAGGGCAGCCTTATCGGGGACGGTGCCTCGCTGTTGGGCGAGGGCGAGGAGGAAGTTGATTTTTCGGATAATCGAGAACGCAGCAATTCCGTGAATACCGAGGATTCGGAgggcggcagcagcagcagcagcagcagcagcgcgAGTAGCGGAAGTGACAGCGAGAATGAGGAGAACGAGGCAGccgaggaagaggaggaggaggaggaggcggaggaggaggaggaggaggaggatgaggaAGAAGAGGAAATTGAATCGCGTACCAATAGCCGAGCAACCGGTGAAGTAACTTGTCACTCGGACAGCGATGAGGAACGCGAATTCCACGACGACAGTCGAGTCGTTCCTCCCGTTGAGAAAGTCAGAGAGGATGAAAAAACGGAGAATACAAATGGATCCGCTATCACGGCAGACGAGCCCAGGAGGATTACGAAAAACATCGAGATGGACGAAGAAGAGAAAAATGAGAGTCAAACGATCGAGCGgatgaaagaagaagaagaagaagaagaagcgggGGAGAGGGAGGAGATAGTGAAGGAGAGGAAAGTGTCGAATTTGCCGGAAGATGTTgagaaaaatagtaattttacgatgaaaaaatcgaaagattGCGCCGCGATAATTGCCGAAGACTCGGACGACGATGGCCCGCCAATACTGAGTCCAATGATGCCCCTGTCGATTGAAAACGTTGCTGAGGAACGCGATAATGTCGCTGGTCACAGGCTCAGTCCAATGCTATCGTTGAACGACGACGAGGCACGCGAGACTCCGTCGGTGCCTGCAAAGATCAATGATATTGTCCAAGAGTTGGATAGCGTTGTCGATTCACCGTCGCCGAATTACGAGCGGCATTACGAGTACGAGGATTCCGTTGAACGTTCCAATGTCAGTGCGGCGGCTTCCAACGACGAGTTGGCAACGGACGAGGAAAACGAGGGAGAAATGATCGAGGATGAGAACGAGGAATTGGACGACGAGGACAGCAGAATTCACGTTGTTAATCCTGACGACGAGTATCATTCGGACGATAGTCGAGATCCtgaggaagaagaggaggaggaaggacaggaggaggaggaggaagaggaggatgAAGGACAggaggaagaagaggaggaggaggaaatcgacgaggaagaggaagagggaGTTTTTGAGGAAAATTTGGAAGTTGAGGGGGAAGAAGGTGAAGATATGGAGATACACAATTTGGATGGAACTGTGCTGATGGTTGCCAACGATGCGGATGGAAATCAAATATTGATTCAACGAAATGTCTCTGACATGGAGAATGACGATTCGATCGGTGCGGTTACCGGATATATCTACGAGGACGAGGAATACGATTTCACGGGATtccatattgaggatggcaccGCGGAGGAAGACGAAGACGAGAAGGAGatcgaggaggaggaggaggaggaggaggaggaggccgACGAAGTGAATGAATTTGAGGAGGATGAAGAGAGGGAAATCGAGGAAACGGAAGAGAGGGAAGCCGTGGAAGATGAGGAGAAGATAAATGAGGAAGATGAAACGAAGGAAATTGAGGAGGACGAGGAGAAGGAAATTGAGGAGGACGAGGAGAAGGAAATTGAGGAGAACGAGGAGAAGGAAATTGAGGAGAACGAGGAGAAGGAAATTGAGGAGGACGAGGAGAAGGAAATTGAGGAAGACGAGGAGAAGGAAATCAAGGAAGACGATGAGGTCCGAGAGTTTCGGGAAGGTGAGGACGATAAGGAGTCGCGGGAGGACGAAAACGACGGGGAAAGGAAAGAAATGAGCGACAAGAGCGACGTACAGGATTCAAAGATAAGTGCCAAAAGCGATTCAGGAACGTAG
- Protein Sequence
- MEPSKERYNELCRLCASYDAVKMDIFGNEGKNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERYLPPANNAAGEELENGVESYSELRTELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADHEIEQIHNVCGTEGGFEDTEDRKSDEYEMDMETNPSDFLEMTPMVTEELEDNKNTKKSQKSKTSRNTEIFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGAKVVTDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRTNLEEHIKSRHTGLPPPPELPVPYVQPDNRYKCKTCPKMYTNVTDLNKHGRVCGGDRTKEKFSKKIAHKRKGRINASEISSSDTDDDSKDYRNAEAKLSKNPQLTILKQALTKGEGPKRDCDDRNLLASKPVKVARIESNEVEQQKRWYCEMCPKNFTSVDKLKEHERIHDAERPYICILCEKDFVLKTSLSRHILSTHGVDPSPILESDKCLKKTALSQSWRKKLMKPELRKALREPTDSSEDAESSSHGNMIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNSQLLNHVNMYHGGSKLLISEQRRYSCTICGRQHDSRKKLITHVSIHNVDPGYDPASFVQLNSNYYNENFNSNEVNDHLMDIDAEDSDKIDCYICYKSFPNEDQLIRHQRNAHKSEPVIPSADLTIQSNGPAPGVNGTKAQYHLFFVCELCGSSHPSKWERWLHVSSNHSDDPSMRCEREDCGKIFATKTLRNEHAQHHLIQGSSPNTCEVCGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVAKLSCHVKTYHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGTEIDSVLGNGPNDNHSETIATSDKSPTEIELTCEMCAGLSFESWETLCNHRRMIHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCRYCMKTSASKDHLLAHIAKIHRYEPDENHEIRDAAAAVATNCPKRMRIEDGEGMHNCDKCQKNFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSEYTCHLCNETVTSKLGIMTHNRVNHLYHPDLTCENGNCKKLFRTKADLESHRKDHRYHNTPNVCDFCGDTVDNKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDEHEGVLHKPNTCQVCGKRYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDTDIRHHYEDMHNVTKDQLAGFENRLDPRTDDCENSDIVVKDEPEDYDYAHETPNSAGVLGRDDNHDCKRRRNNKRDTHDCAICPEIFLNRETLADHCRNVHNTEAERMFKRIKLETTSANQEDGCAKRTMRERENFECKNCARQFCTKTLFWNHINVCTRRGAIGKDETRTGSMCSILEAQLKNNNRIKKEPMEMCLSETNLNIPDFNLFEDINMQLSEQKPIPSLMPLSELRLGGIKKLSRKDTRKDSRKVYDESTNTVCICEVCGKQWPAKKHLWQHLIRFHRTEAAVTCGVCLKLCTNYEELARHLRESHESILSCEGNNFTCKTCGRYHNARSKLLLHMSIHINGNGIAWCKKCEQSFESEDRLNEHTAICDKKETIFGEHSVDIDMDTDIKIEDDDDKGSLIGDGASLLGEGEEEVDFSDNRERSNSVNTEDSEGGSSSSSSSSASSGSDSENEENEAAEEEEEEEEAEEEEEEEDEEEEEIESRTNSRATGEVTCHSDSDEEREFHDDSRVVPPVEKVREDEKTENTNGSAITADEPRRITKNIEMDEEEKNESQTIERMKEEEEEEEAGEREEIVKERKVSNLPEDVEKNSNFTMKKSKDCAAIIAEDSDDDGPPILSPMMPLSIENVAEERDNVAGHRLSPMLSLNDDEARETPSVPAKINDIVQELDSVVDSPSPNYERHYEYEDSVERSNVSAAASNDELATDEENEGEMIEDENEELDDEDSRIHVVNPDDEYHSDDSRDPEEEEEEEGQEEEEEEEDEGQEEEEEEEEIDEEEEEGVFEENLEVEGEEGEDMEIHNLDGTVLMVANDADGNQILIQRNVSDMENDDSIGAVTGYIYEDEEYDFTGFHIEDGTAEEDEDEKEIEEEEEEEEEEADEVNEFEEDEEREIEETEEREAVEDEEKINEEDETKEIEEDEEKEIEEDEEKEIEENEEKEIEENEEKEIEEDEEKEIEEDEEKEIKEDDEVREFREGEDDKESREDENDGERKEMSDKSDVQDSKISAKSDSGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -