Basic Information

Insect: Rhorus exstirpatorius
Gene Symbol: -
Assembly: GCA_963564615.1
Location: OY751313.1:13743666-13750187[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 6.1e-05 0.006 17.3 1.2 1 23 362 385 362 385 0.94

2 19 0.032 3.2 8.8 0.6 2 23 432 453 431 453 0.95

3 19 0.022 2.2 9.3 0.7 1 23 558 580 558 580 0.96

4 19 0.00052 0.051 14.4 1.4 1 23 584 606 584 606 0.97

5 19 5.1 5e+02 1.9 1.3 2 20 709 727 708 729 0.92

6 19 0.0058 0.57 11.1 0.3 1 20 732 751 732 753 0.92

7 19 0.033 3.3 8.7 0.2 3 21 764 782 762 786 0.91

8 19 3.4e-05 0.0034 18.1 4.3 1 23 895 918 895 919 0.95

9 19 6e-05 0.0059 17.4 3.9 1 23 996 1018 996 1018 0.97

10 19 0.00017 0.017 15.9 0.7 1 20 1023 1042 1023 1044 0.94

11 19 0.062 6.1 7.9 0.3 2 23 1055 1076 1055 1076 0.97

12 19 1.6e-05 0.0015 19.2 0.7 2 23 1115 1136 1114 1136 0.97

13 19 3.1e-05 0.0031 18.3 1.6 1 23 1141 1163 1141 1163 0.95

14 19 0.00062 0.062 14.2 2.7 1 23 1169 1191 1169 1191 0.98

15 19 5.6e-06 0.00055 20.6 0.4 1 23 1207 1229 1207 1229 0.95

16 19 1.8e-06 0.00018 22.2 0.3 1 23 1235 1257 1235 1257 0.99

17 19 0.00018 0.017 15.9 0.3 1 23 1263 1285 1263 1285 0.98

18 19 0.00018 0.018 15.9 4.1 1 23 1291 1313 1291 1313 0.96

19 19 0.013 1.3 10.0 0.4 1 20 1319 1338 1319 1340 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	6.1e-05	0.006	17.3	1.2	1	23	362	385	362	385	0.94
2	19	0.032	3.2	8.8	0.6	2	23	432	453	431	453	0.95
3	19	0.022	2.2	9.3	0.7	1	23	558	580	558	580	0.96
4	19	0.00052	0.051	14.4	1.4	1	23	584	606	584	606	0.97
5	19	5.1	5e+02	1.9	1.3	2	20	709	727	708	729	0.92
6	19	0.0058	0.57	11.1	0.3	1	20	732	751	732	753	0.92
7	19	0.033	3.3	8.7	0.2	3	21	764	782	762	786	0.91
8	19	3.4e-05	0.0034	18.1	4.3	1	23	895	918	895	919	0.95
9	19	6e-05	0.0059	17.4	3.9	1	23	996	1018	996	1018	0.97
10	19	0.00017	0.017	15.9	0.7	1	20	1023	1042	1023	1044	0.94
11	19	0.062	6.1	7.9	0.3	2	23	1055	1076	1055	1076	0.97
12	19	1.6e-05	0.0015	19.2	0.7	2	23	1115	1136	1114	1136	0.97
13	19	3.1e-05	0.0031	18.3	1.6	1	23	1141	1163	1141	1163	0.95
14	19	0.00062	0.062	14.2	2.7	1	23	1169	1191	1169	1191	0.98
15	19	5.6e-06	0.00055	20.6	0.4	1	23	1207	1229	1207	1229	0.95
16	19	1.8e-06	0.00018	22.2	0.3	1	23	1235	1257	1235	1257	0.99
17	19	0.00018	0.017	15.9	0.3	1	23	1263	1285	1263	1285	0.98
18	19	0.00018	0.018	15.9	4.1	1	23	1291	1313	1291	1313	0.96
19	19	0.013	1.3	10.0	0.4	1	20	1319	1338	1319	1340	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTGGGTATTGATACGGCGGAGGATGCCCATGAGGATACGATCGAGGAGACAGTTCCTGAGGTCTGTCGGGTCTGTTTGCTCGGACATGTTTTAATGCGCGATCTGTTCGTTGAGAACGATGTCGTATCACTCTCCACAAAAGCGATGAGCTTTGCAAGCGTTAAGATGGTACCCGAAGATGGTTTACCGGCGCAGGTTTGCTGCGAATGCGCCGACAAACTTGACGCGGCGTACGAGTTCAAGCTACAGGTCGAACAGGCCGACAATGTACTGAGACAGAGATACGACGGTCTCAACATCAAGGAGGAACTTTTCTTCAACGAAGTTGAGGTCCATCTGGAGGCCGATAGAGGCGACGAAGCGCAAAATCTTGATGCGGACGCTCATTATCAAGCGACCGTCGATAGTTTGAGCGCGGTCGACGAAGGAAAGCCAACTCTGCTCAAGGATCACTTGGCCCTGCTGGAAGTCGAGAAACTTGCCAAGCAACAACGGAGCGTTCTGGACGCCGAGCACAAGCATAACGTTGAAATGGACGAGGAGGCCGGTGTAACGGAGATGCTTCGAGTGAACGACGAGGAAACGAATTATTTGCGCAAAAGCGAGGAAAGGGCGACGGAATTGGGCGATTGCGGCGGGGATTATGGTGATTCGGTTAAAGACGAGAGCATGCACGAGCCCGATGCCATAACGATCGAGGAGCACAATTATATAATTCAACAGAATTACACGCTTGCGCGAAACGTGGAGCATGAGCTCGGTACGGAGGAGAGCGTTGATTCGGTGGTGAACGAAACCGTGAATTATTTGTCACTGATCGACGATGATATGAGCGTAAGAGTAACAGCGAGTGAAACGGAAATTTCGAATATCGTAAAATCCGAGGAGAAGAGCGACGAGACGTCagcgaggggggaaaaaaatgaaatttgtcAAATCGAGACGCGTCGTAGCAAGCGAAAATTGAGCAAGCTTCGTCGCGCGAGCGACGAggataattattttgaaaatttgaatctAAGCAgtagattgaagaaaaaaggaCAGCAGCCCGAGAAGAGcgagaaattatattttctctGTTATTTGTGcgacaaaaaattcatatccaAGGACATGCTCAAGGATCACATGCTTCGGTCGCACGAGGAGGTGAGACGAGCATTGTCGCtgaagaaaaatgataaaacggATAAATTCGAGACGAGCCCGATCAATGCCGCAGCTACGATTTCCAGCCAATCGAACAATTCCGTTAACTCGCTGTCCGGCAAAAAAGCCAACAAATGTCCCTACTGCGGCAAAGAATATCTCTATGTTATATCGTTCAACAAGCATCTCAAGCAGCACGAGAAGAGCAAAGAAATTTTCACGAAAGATTCGTCTTTTTCTCATGAATCGTCCGTTAATGCTGAAGATTCGACGGATTTTGTGGATTACGATGCGCGAGAATCCATGCAAAATAATAGTCGGGTCGAGGCgagcaacgacgacgacgacgacgacaacgacgacgacgacgaaaacggCAACGACAacgaaaacaacgacgaaaacaATGACCACGAAGCGGATAACGACGAGACTTTGAGAAACTCAACGGAAACGAATTTATCGTCCAAGACGACTCAAGTTGGCTCATCGAGCGCCGTAAGAGTCGCGTATTCTTGCGAaaaatgtatggaaaaatttgccAACAGCCGTCAATTATTGGATCATACGAGCGAGCATTTTTCCAATTTCAAATGCAACACCTGCGATCGCGAATTCGAGGAATTGGAAAAATTACGAAGACACAGAAGCGAGCACGTTGTCGATGGTGTACTTTCGCAGCAGGATCTCGATGATAATGTTTACGCTCGAGAATACGTTAACGAAGCAACGAACGACGATGAAAATGTGATTTACGGTAGCGACGATCTTGCCGTTTCTCACGACGTCGTCATGAATTCTTGCGATCGTCCCGTCGACGTTCGGGATCCCAGCGTGAGCGGAGAAAATGAAAGCTCGTCGTGGCACTACGCGATGATGAACGAGAGCGTCGAGAACGCGGAGCTCAAGGCTAACATTCGTATCAATGAAATTACCGATGTTTGGCCGGATATGAAGAGCCAAAAATGTTCGAACTGTACGTTTGCGTGTACGAGCAAAAAAATTCTCGCTCGTCACGTGGACAACGTGACGCATATTTGCGAGCATTGTAAAATGTCGTTTGTCAGCCGTGCGAGTCTCGTGGAGCACGCGGAGCGGGAAAATTCGTGCCGTTTCGGGACATTCGGATGCACGGATTGCGGCAAGCTGTTCGGCAATGAGCTGACACTGAGGAATCATTTGATCGCGACGGATCACAAAACGATTATTCACGGAGAGCCGTACGATCCGAACAAGCGTATAAAGCGCGTAGCGGCTAAAGCCGCCCAGAGAATAATCGACAAGATCAAAACGGAGGACAATTTGGAGGattacgacgacgacgaggaagaggaagaagaggaggatCAGGAGACGAAGGAAGAGAATGCGGAAAATAAGATAAAAACTGAGGAACAGGAAAATTTTAGTACGAGCAATACAAAGATCGGCAATGTTCCGAGATGGCCTCGCCAGGCTAATAACGAGGCAGCGTCGGCGAGAAAAATTCAGCAGCATCGAAATCGAAATCGTAGATGCGATTACGAGTGCGAGATCTGCGGTCGCAAGTGCAGCTCCAAGCAATCATTGACGAAGCACATGGAGCAGCAGCATCATCATCGGGCCATAAAGGACGAGGCGCGGggcgataaatttgaaaaatttcgtcgcAACGAAACATTGGAAATTACGGAAAGAGCGAGCACGCGCGTTGTTCAGCGCAAGAGCGGCGGATCATCGACGAGACGGGACGACAGGACCGAGGATGAAACggaaaacgacgacgacgacgacgacaacgagaCGTCGGATTTCGAGAGCGGCCTCGATTGGCCGATCGACAATCACGAGTGTCCGACCTGCAAGAAAAAGTACAGCACGAAAAAATCTCTTCTTCGTCATCAGTTGCTTCACGACGAGCCGAATTTCGAGTGCGACATATGCGGCGTTAAATTTTATCGCAAGGACAAGCTCAAGTCGCATTACGACAAGTGCTCGGAGAAGAATCCCGATCGGGTGAGAAAATGCAATATATGCGGCGATACTTTCGAGAACAATGAGATATTGCGCGAGCATCGGGCGCGTCACGTCGACGAGGGAATACTAACGGCCGAGGATCTTCGAGATATCGAGCCCGGCAGCGATGAACGCGGCGAAACGACGAAGATCGCCCGCAAGAGGCGCACCGATATCGTCGGCCTCGAGTGCACCGAGTGCAACAAGCGTTACACCTCGAGGAAGGGTCTTCTGCGTCACATACAGGTACACGAGGGCAAAAAATATCTCTGCGACATATGCCCGAAGAAATTTTATCGTCGAGAACATCTCAAGATTCACGTAGCCAAGCACAATATGATAAAACCATACAAATGTACGCGTTGCACTAAACGTTTCATCAAGGAGGAACAGCTTTCGTCTCATTTGTCGAAACACGATCGTACGTTCAAGAAACCAAAGGAAACGGACACTTCAAAGAGATTTCTCTGCGAGATATGCTCGAAAAGTTTTACCCAATCGACGACTCTCATAGCTCATCTGAGAGCTCACAATGGCATAAAACCATACGTTTGCGAAGTTTGCGCGCGTCCGTTCACGACAAATGCGTATCTGAAGATGCACATGAGAACTCACACGCAGGAGAGACCTTACAGCTGCCAGTATTGCCTGAGAGCGTTCGCGCGTGCCGATACGCTTGCGAATCATTTGACATCGCATACGGGCGAGGCGAAGTATCATTGCAAATATTGTCCGAAGAATTTTCGACGCTTGAAATCCCTGAAAGAGCACGTTTTCATTCATACGGGTCAGCGACCTTACGCTTGCCCGACGTGCGATCGTCGTTTCAACAACAACGGCAGCCGTTACGCTCACAGCAAGAGATGCAAGCAAAGTCTGATGCAAAATTCGAATCGCGGACAGAGTATTAATCACGCCGCGACGATGCCGACGAGCCCGATAATGCAGAACAATGCCATGACGCAACCGATAAGGCTTCATCAGCTGATGGGAAGCCATCAGCTGTTGACGGGACATGAGGAACAGCAGGAGCTTCAATTGATGAAATCTCAGGGTATAAAGACGATAACGATTGCGAGAGCCGGCGATCAATTGACCGGTCATCAGATGATGCAGCATCAGGAGATACTTATGCCGCTTATATTGCCCCTCACCGTCACACTAGCGGACGTCGACGAGGAAGTTATATTGCCCGAGGGCACGAAAATCTACACGACGGCTTAA
Protein Sequence: MDAVGIDTAEDAHEDTIEETVPEVCRVCLLGHVLMRDLFVENDVVSLSTKAMSFASVKMVPEDGLPAQVCCECADKLDAAYEFKLQVEQADNVLRQRYDGLNIKEELFFNEVEVHLEADRGDEAQNLDADAHYQATVDSLSAVDEGKPTLLKDHLALLEVEKLAKQQRSVLDAEHKHNVEMDEEAGVTEMLRVNDEETNYLRKSEERATELGDCGGDYGDSVKDESMHEPDAITIEEHNYIIQQNYTLARNVEHELGTEESVDSVVNETVNYLSLIDDDMSVRVTASETEISNIVKSEEKSDETSARGEKNEICQIETRRSKRKLSKLRRASDEDNYFENLNLSSRLKKKGQQPEKSEKLYFLCYLCDKKFISKDMLKDHMLRSHEEVRRALSLKKNDKTDKFETSPINAAATISSQSNNSVNSLSGKKANKCPYCGKEYLYVISFNKHLKQHEKSKEIFTKDSSFSHESSVNAEDSTDFVDYDARESMQNNSRVEASNDDDDDDNDDDDENGNDNENNDENNDHEADNDETLRNSTETNLSSKTTQVGSSSAVRVAYSCEKCMEKFANSRQLLDHTSEHFSNFKCNTCDREFEELEKLRRHRSEHVVDGVLSQQDLDDNVYAREYVNEATNDDENVIYGSDDLAVSHDVVMNSCDRPVDVRDPSVSGENESSSWHYAMMNESVENAELKANIRINEITDVWPDMKSQKCSNCTFACTSKKILARHVDNVTHICEHCKMSFVSRASLVEHAERENSCRFGTFGCTDCGKLFGNELTLRNHLIATDHKTIIHGEPYDPNKRIKRVAAKAAQRIIDKIKTEDNLEDYDDDEEEEEEEDQETKEENAENKIKTEEQENFSTSNTKIGNVPRWPRQANNEAASARKIQQHRNRNRRCDYECEICGRKCSSKQSLTKHMEQQHHHRAIKDEARGDKFEKFRRNETLEITERASTRVVQRKSGGSSTRRDDRTEDETENDDDDDDNETSDFESGLDWPIDNHECPTCKKKYSTKKSLLRHQLLHDEPNFECDICGVKFYRKDKLKSHYDKCSEKNPDRVRKCNICGDTFENNEILREHRARHVDEGILTAEDLRDIEPGSDERGETTKIARKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEEQLSSHLSKHDRTFKKPKETDTSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCARPFTTNAYLKMHMRTHTQERPYSCQYCLRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQSLMQNSNRGQSINHAATMPTSPIMQNNAMTQPIRLHQLMGSHQLLTGHEEQQELQLMKSQGIKTITIARAGDQLTGHQMMQHQEILMPLILPLTVTLADVDEEVILPEGTKIYTTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -