Rexs007232.1
Basic Information
- Insect
- Rhorus exstirpatorius
- Gene Symbol
- lov
- Assembly
- GCA_963564615.1
- Location
- OY751315.1:15294407-15303161[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.9e-16 5.4e-13 48.8 0.0 1 44 564 607 564 608 0.95
Sequence Information
- Coding Sequence
- ATGTCGAGCACCGCCGACAGTCCGGACCCAACTATGGCACTGCAGTCGCACTATTCGCTGAGATGGAACAATCATCAGGCGCATATATTGCAGGCATTCGAGGCATTGCTACACGCCGAGATACTCGTAGATGTGACACTGGTCTGCACCGAGACCAGCCTCAGAGCCCACAAGGTCGTTCTAAGCGCATGCAGTCCGTTCTTCGAGAGGATATTCGCCGAGCATCCGTGCAAGCATCCGGTGATCGTGCTAAAGGACTTTCCGGGACGCGAGGTAGCGGCGCTCATCGATTTCATGTATCGCGGTGAAGTTCGCGTTGGTAGAGAGGAATTGCCGGGTCTGATGAGAGCTGCGGAGAGTCTACAGATACGTGGTTTGGCATCGTCGGAGCCGAGACCGGCGAGTCCGCCGGAGACCCCGACGACGGATCTTTTGGTCGAGCCATCGACGCCCGAAGGCGCGCGACAGGGTAGTCCGATGGACGATGAAAATCTTGAGACAACGGCGACGCGTATCGAGACACGGGGCGGCATTTTACAACCGGAGAATCGTTTGCCGCACATGGGACACTTGAACTTTTCCGTTCGCGATCTTCATGAATTGTGCAGCTCGCCCCTGTTGCCAAGGAGAAAGCAGGCGAGGCCCAGAAGAAGATCGGGCGAGCTGGTCGCCCAAGATCTCAGCAGGCCGCAGCCACCGCCGAGTCTCAGTCCACCAAGCGGCCTGAATCTCGCCGGTGCGAGACAAGAACTTCACGCATCTCCGGCGTCATTGacggcaacgacgacgacgacgacgacgaccccGACGAGCCTAGCACCGCCTCTATCAAACATAAATAACAACAATATTCATCAGAATCAGTCTCACAGCGACGACATTGCCGAGAATCTCTCGTTAAAGAGACCACAGTCGCCGGAATCACCGAACGAGCACGAAAAACAGCGTATAAAGATCGAGCGTGAGCAAACAATGAGTCCGCGTTGTTCACCCCTGACGGGTCCCCTCATCGCGGACATCGGTCTTGCGGATATTCCCGTAAGCGGACATTCGGCGATCGCGTCAATGTCCGCGACTCCGCCTCATCATCCAAGTGGTTATCTGACGAGCCTCGGTCAATTTGCCGCACAATGGCTGCCTAATCCAAATCACATGAGCCAATCGTCGTCGCATCATACGAGTGACGGTAGTCCGCACAGCCGGAGTCAGCACAATCAttatcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcaagccAGAGAATCGCAACAGTGCCGGGAACAACAGGAGCAACACAGGCAGGAACAAGAATCCTCGTTACCCTCGATAAGATCGGTTGCCGTATTTCCCATGGACGGTATGTCGCCCGTTGGCAGTGCAATATTTCCTCACGGCGGTGGACTCGAACGTGGCTCACTTCTCGCCGATCTTCACGACAGCTTCAAGCCCGAGACGCTTCACGGTTTGTTCGGCGGTGCGAGTCTgggtcatcatcatcatcatcatcatcatcataatacGGGGAAAAAGTCGAAAAAGCCACGTAGCGAGGGCGCGAGTGCTCGCAGATGGGCCGATCACGGACGCGGCGGTATGCCGATAGGCAGGCCGAAAGGACAGCACAGCGCGCCGCGCGGTGGACCACCGAGATCATGGACAAACGCCGAGCTGACGATAGCGCTCCAGCACGTATGGAATAAACAAATGACGACGTCACAGGCAAGCAGAATGTTCGGTATACCGTACAACAGTCTGCTGATGTATGTACGGGGTAAATACGGCAAGAGCCTAAAGCTCGAGCAACTGAGGAGGGATTGCACGGGTGCTACGACGGGCGAGGTGATGAACTCGTTGAACAACAATGTCAAGGCCGTTCAGGGGCCACCTCAATTGAGTCATCCGCTCGCTGGCCTGACGCATCCGTCCGACGACGGCAATTTTCCACATCATCCGCTGCTCGGTGGTAATCTCTCGCAGGGTTTTTTTCCCGACTACACCGCAGCGTTTCCCGTACCCGTGAGCATGGTACATCTTCTGCCGCCCAGTGAACAAAAGTCACTCGACACATCGACGAATACCGGCAATCCAACCCTCAATTGTCCGCCCGTTATCATCGATTGTCCATCGGCAAGTCCACAGGGCAGCGATATGGCGCATCGCAGTCGTACGCCATCGCCATTGGACAACAATCATGagacatcgtcgtcgtcgtcgattaCGCCGCAGGCACCGCAGTCGGCACCGGCGCTTTTACAACAAAATGGCGCGGATTGA
- Protein Sequence
- MSSTADSPDPTMALQSHYSLRWNNHQAHILQAFEALLHAEILVDVTLVCTETSLRAHKVVLSACSPFFERIFAEHPCKHPVIVLKDFPGREVAALIDFMYRGEVRVGREELPGLMRAAESLQIRGLASSEPRPASPPETPTTDLLVEPSTPEGARQGSPMDDENLETTATRIETRGGILQPENRLPHMGHLNFSVRDLHELCSSPLLPRRKQARPRRRSGELVAQDLSRPQPPPSLSPPSGLNLAGARQELHASPASLTATTTTTTTTPTSLAPPLSNINNNNIHQNQSHSDDIAENLSLKRPQSPESPNEHEKQRIKIEREQTMSPRCSPLTGPLIADIGLADIPVSGHSAIASMSATPPHHPSGYLTSLGQFAAQWLPNPNHMSQSSSHHTSDGSPHSRSQHNHYQQQQQQQQQQQQQQQQQQQQQQARESQQCREQQEQHRQEQESSLPSIRSVAVFPMDGMSPVGSAIFPHGGGLERGSLLADLHDSFKPETLHGLFGGASLGHHHHHHHHHNTGKKSKKPRSEGASARRWADHGRGGMPIGRPKGQHSAPRGGPPRSWTNAELTIALQHVWNKQMTTSQASRMFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGATTGEVMNSLNNNVKAVQGPPQLSHPLAGLTHPSDDGNFPHHPLLGGNLSQGFFPDYTAAFPVPVSMVHLLPPSEQKSLDTSTNTGNPTLNCPPVIIDCPSASPQGSDMAHRSRTPSPLDNNHETSSSSSITPQAPQSAPALLQQNGAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00262575;
- 90% Identity
- iTF_01306642;
- 80% Identity
- iTF_01306642;