Rexs009391.1
Basic Information
- Insect
- Rhorus exstirpatorius
- Gene Symbol
- klhl36
- Assembly
- GCA_963564615.1
- Location
- OY751316.1:13287989-13294013[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.2e-09 3.3e-06 27.1 0.0 2 42 206 246 205 248 0.90 2 4 3.1e-10 2.5e-07 30.7 0.0 5 39 259 292 256 299 0.85 3 4 0.0024 1.9 8.6 0.0 7 34 313 339 309 344 0.85 4 4 2.5e-11 2e-08 34.2 0.1 5 39 371 405 370 410 0.92
Sequence Information
- Coding Sequence
- ATGTCGGCAACAATAACAGCAGCGAGCACCAGTCAACCTCAAAACGAGAAAGGCTGCTGTTACAAATGGACCGATCATCAGAATTATTTGTCGGACGTTGTTCGACAGCTTCTCCAGGAGGAGTGTATGGTCGACGTGACCCTCGTCGCCGACGGGGAACGTATACAAGCCCATCGTATTGTACTGTGTTCCTGCAGTACTTTGTTTCAGGAGATACTAAGCGAGGCAAACGAGGAGCATTCGACGATAATACTCAGTGACATATCGGCGCAGGATGTGAGATCTATAGTGGAATTTAGTTATCACGGCGAAGTTAGAATTCCCGTTGAAAATATCAGCAATTTATTGGAGGCTGCGCATTCCTTGAAGATTTGCGGTCTTATGGAGATCGATGGGCTAGACGAGAACGATGCAATTATAAGTACCAAAGATCTGGGAGAGGATAACATCGAATCGTTGAACGATTTTGATGAATCCTTCGACGATGCGAGCGATCCCTTGGAGGAAAAGCCGCTCTCATACGAAAACGTGAGAAAGAGTTGCGAGCGAATTGACAAAGCATTGTCGAACAAGGGAAGAAAACGCCGTAAGGAAGCCTTGAGACGCGATTACAACGACGATATGCTGGCTTCGGCGATAAACGATCTGAGATCGGGCATGACACTCGTCGAAGCTTCGATAAAGCACAAGATACCACGCTCGACTCTTTACATGAGAGCAAAGTCGCTGGGAATACAATTGAACGCATCGAGAAACGAATATCCCGCCGAATGTATGAAAGCGGCGATCGACGCGGTTATCGAGGGTTCGAGCTTGCAGCACGCTTCGgacgaatttttcataccaaAAACCGTGCTCTGGAGGCGAATACAAAAGGAGGGATATCAGATATTGCGCGGGGAGGTCAAACGCTCGTACGGGCAGGAGAAGAGAGAGGCCGCCATCAGAGCGCTTCAACGTGGCGAAAATTTGACCAAAGTTGCGCAAGAATTTCAGATACCAAAAACGACGCTGTTCCGTGACAAAGTGAGACTGGTGGACGAGGGCAAATTGCCCGAGTCTTTTTGGAAGAAACGAAAAACCGGAAATGAGGAGTGGAAGAAATTGCGTCTCGAGGAGGCCGTCGCGGTATGCAAGGAAGGAAAAATGTCGCAAGCAGCGGCAGCGATGAAATACAGAATACCAAAAACAACGATATGGCGAAGATTGCAGCAGGAAGGAAAGAGTAACGCGGTCACGAGGGGATCGGAACGTTCGTTCGACGATAAAAACGAGGATAATGATTCCGAATTTCCTTTGTGCGAGGTATCCTCGGAAATTCCAATAACTTACATAGACCAGAATCTACCGACGGATTCGGTCATAATATTGACGTCGGAAGACGTCGATGGCCTGAATCTCGACGAGGGCAGAGAAATAATCGTCAAtcaaGATTCCGAACAGGATTACGTTCGATGCTCTCTCAACGTATCCGAGAACAGAGAGACCGCGGACTATCAACGAGCGGAGAGCTAG
- Protein Sequence
- MSATITAASTSQPQNEKGCCYKWTDHQNYLSDVVRQLLQEECMVDVTLVADGERIQAHRIVLCSCSTLFQEILSEANEEHSTIILSDISAQDVRSIVEFSYHGEVRIPVENISNLLEAAHSLKICGLMEIDGLDENDAIISTKDLGEDNIESLNDFDESFDDASDPLEEKPLSYENVRKSCERIDKALSNKGRKRRKEALRRDYNDDMLASAINDLRSGMTLVEASIKHKIPRSTLYMRAKSLGIQLNASRNEYPAECMKAAIDAVIEGSSLQHASDEFFIPKTVLWRRIQKEGYQILRGEVKRSYGQEKREAAIRALQRGENLTKVAQEFQIPKTTLFRDKVRLVDEGKLPESFWKKRKTGNEEWKKLRLEEAVAVCKEGKMSQAAAAMKYRIPKTTIWRRLQQEGKSNAVTRGSERSFDDKNEDNDSEFPLCEVSSEIPITYIDQNLPTDSVIILTSEDVDGLNLDEGREIIVNQDSEQDYVRCSLNVSENRETADYQRAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01306635;
- 90% Identity
- iTF_01306635;
- 80% Identity
- iTF_01306635;