Basic Information

Gene Symbol
ct
Assembly
GCA_963564615.1
Location
OY751320.1:15074048-15097674[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.8e-27 6.9e-24 84.0 0.0 2 72 495 566 494 571 0.95
2 3 1.6e-31 1.2e-28 99.2 0.0 2 77 905 981 904 983 0.96
3 3 1.5e-30 1.2e-27 96.1 0.0 3 76 1163 1237 1161 1240 0.96

Sequence Information

Coding Sequence
ATGAGAATCCGCGAGATCAGTCAATTGGTTGACGAGGTCTCGAGGTTACAGCAGAGCCTGCAGCGTCTTCAGGAAACGAGCTCGCAGTCGACGTCGCGCCTCGAGGAGGAGCTCGAGGCACGAAGACAGCACATCAGCCGTTTGGAGAGCAAACTCGAGCGTCAGCGTGACTACGACGATATCAAGCGTGAGATAAGCGTTTTGAGATCGGTCGATCTGTCGCAAATACCGACCGGTGAACCCGGCAAGAGCCTCGAACATCTCCTAATGGAAAGGACGAAGGCGTTACAGCAAGCCGAGACACTAAAATCACCGAGCACTCCGGATGCACTCGGTGGACTAGCCTCACCCCTTCAACGCGCCGCGACCGCTTCACCCCACGCTCTTGGTGGTGGTGTAGGTGGTGCTGCCGGTGTCGTGACTGGTGGGAGTGCTGCGCCGCCACCCGTGTCCCTCGTCTCCTGTTCCCAACAAGCAATCCCGTCGCGCTCGACCCCGACACCCTCGTCGGCTACTTCGACCGCCTCGAGTCTCCTATTTCCACCACCTCTCCAGAACGTTGAGACCTTTGGCTCTTTCCTCGGCGAGGAGATCGTCGCCAACTGGAGGCGGTCCCTGGAGAGATCGATCATgagccagcagcagcagcaccatcaccaacaacagcagcaacagcatcaatcccaacagcaacaacaacatcCCCAGCAACAACAATCGCACCTACAACAACAACCGCTAACGTTACATTCACAAAACCAAGCTCTCTCCCAGCTCCAGCAGTCGCAGCccgttgttgctgctgctgtagCGGTGCATCAAGCATTTCAACAGCAGCAATCGATGCACTCGTTGCATCCATCAACGACAACCAACCTAAATCACCTTCCATCACCAACAGATAATCCATCGTCATCGGCATCGTTAACGAACACACCGGCCAAGTCGAACACGCCACTATTGGGCGGTTGCCTCGACGCAACGGAAAAGGCACCAACGCCGATACCCGGTCACGAGACCCCCGCACCACCGACGCCCTCCTCCACAGTTGCACTGACGTCACCCTCGATACCGATGGTCGTTAATGCACTTCAACCGCCACATTCAGCCACGAAAACTACCCCAACGATCCTCGATACGTTACACACGACCAACAACACTATCATGAACGGCTCGAGCATAGGAATGTTGTCAGGTATAATGCCAGCGTCGCTACCGCCAAAGAGTCCCCAGGAGGAGTCCTgtcacaacaacaacaacaacagccaTCATCTGGCAAACAACAATATAGGCGGTCTCAGTGTACTGGACACGCTAAAGAGTCCTTTTCGTTTCGACGATAGGACACATCCGTTTAGATTCGGCGATGAATTCGGCGCGGCAGGAATGGCGGGAAGACTCGGTGAGTCACTCATACCAAAGGGCGATCCGATGGAAGCGAGGCTTCAGGAGATGTTGCGCTACAACATGGACAAATACGCGTCGCAGAATCTCGACACGCTTCACATAGCGAGGAGAGTCCGAGAATTACTGTCGATACACAATATCGGGCAGAGGCTCTTTGCCAAATACGTTCTTGGACTTAGCCAGGGTACCGTCAGTGAACTTCTCAGTAAACCCAAGCCCTGGGACAAGCTCACGGAGAAGGGACGCGACAGCTACAGAAAGATGCATGGGTGGGCGTGCGACGAAAACGCCGTGATGCTACTCAAATCACTCATACCGAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGTATTCCAGCATTTGGACGTGGTCCGCAGGACGGTGGTACGGCCGACATGAGCGACGAGAGGCTGGCTCACATACTCTCGGAATCGGGACATTTGCAGATGAGCAGGGGCGAGCACGACACGTCGAATGACGCCGACAGCAAAAGCCCAAGTAGACTCGGTTGTCCAAGTCCATTTGGCAAGGACAGAATGGACAGTCAGAACAGAAGACTGAAGAAATACGAGAACGACGACATTCCACAGGAAAAAGTTGTGCGAATATATCAGGAGGAATTGGCGAAATTAATGGGCAGACGAGTCGACGATCTTCGTGGTCCGCGCGATTTTCCATCGAGCGCGATGTTTCCACACTTTTTTAGCGGTGGCCAGGGTATGCAGGGCATGGAACGAACCCAGGACGACATAAGACTCGCCCTCGATGCTTATCATCGTGAATTGCAAAAGCTCAACGTTACACCGGGACAAAATCCAGCTGGACTCACTGGTCTGCCGGGTTTGCCGGTCTTACCGGGTCTTCTGGCGCTACAGCAGCAGGCACTTCAGCAGCATCATATGGCGGCTAACGGTGGCGTAGTGCAGGATCTTAGTTTGGGAAAAATGGATCCACGTGGTAAAATGATGAACGGGGTAACGGACGAGGAGAAGGACAAGATGGAGGAGGCAATGAGACACGCGGGTAGTGCATTCTCATTGGTAAGACCAAAGCAAGAGCCAAGCGGTCCGCAATCGACGCCCGGTGGTTCCAGCGCCAGTTCACCCCTGGGAAATTCCATATTACCACCGGCAATGACACCCAACGAGGAATTCACGGGTGCAGCAGCGGCCAGTCCACTCCAGAGAATGGCATCGATAACGAATAGTTTGATAAGCCAACCTTCCACACCTACGCATCATACGTCCAATCAGAGACCCCTCAAAGCCGTACTACCACCGATAACCCAGCAACAATTTGACATGTACAATAATCTCAATACCGAAGACATCGTGAAAAGGGTGAAGGAACAACTCTCGCAATACTCGATTTCGCAGCGTCTCTTCGGTGAATCCGTGCTTGGCCTTTCGCAGGGCTCGGTATCGGATCTTCTCGCGAGACCAAAACCCTGGCACATGCTCACGCAAAAGGGTCGCGAACCATTCATAAGAATGAAGATGTTCCTCGAGGATGACAATGCCGTGCACAAGTTGGTCGCTAGCCAGTATAAAATAGCACCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCTTGTGGAACACCCATGAAGCCGATGCCACCGACGAAACTGGTGCAGGAACAGTTGCAAAACGCGGCAAAGGCGCAGGCCGCGGTACAAGCGGCAGCGCAGGCAGCTGCCGCGGCAGCAGCGGCGGCACAACATCAGCAGGACAATCAAATGCAGCTAGGTCCACCACAGCCAAGTCCCCAGCATCAATCGCATCCTCAGCCACCGCCTCCCCTGATGCTAACACCAACGGGGCTTCATCATTCTCATGCTCAGCTGAGCATACAGGAGCTGCAGAAGAAGCAACAACTAGctcaacagcaacagcagcaacagcaacagcagcagcagcaacaacagcagcaacaacagcagcaacagcagcagatGGGTCTTCACTCGCCTCATCATCAGATGGTACCGTCACCATTGCGCAGCCTCCATCAGCACATCTCACCGAGTGTCTACGAGATGGCCGCGCTGACTCAGGATCTTGACACGCAAACGATAACGACGAAGATAAAGGAAGCCCTGTTGGCCAACAATATCGGTCAGAAGATCTTCGGCGAGGCCGTGCTCGGTCTTTCGCAAGGCTCGGTCAGTGAGCTGCTAAGTAAGCCAAAACCCTGGCACATGCTCAGCATAAAAGGACGCGAGCCCTTCATAAGAATGCAACTCTGGCTGTCGGATCCGCACAATGTTGACAAACTTCAGGCCCTGAAGAACGAGAGACGCGAGGCGAACAAGAGACGACGCAGCAGCGGACCCGGCCACGACAACAGTTCCGACACCTCGAGCAACGACACAGCCGAATTTTATCACGCCTCGTCGCCCGGTCCCGGACCACCATCGGCCAAAAAACAACGTGTTCTCTTCTCCGAAGAGCAGAAGGAAGCACTGAGGCTTGCATTCGcgcttgatccgtatccaaatGTCGCGACAATCGAGTTTCTCGCTGGTGAGCTTGCCCTATCCTCGAGAACGATAACCAACTGGTTTCACAATCATCGCATGAGGCTCAAGCAGCAAACGCCTCATGGACAACCGGAGCAGCAGTCACCCCGCGAACCCGGAGCGCCCTTCGATCCTGTACAATTCAGGCTACTGCTGAATCAACGATTGCTCGAGATTCACAAGGAACGCTTGGGCATTGGCAATGTACCAATACCCTATGGACCGTACTTTAATCCAAATATAGCGGCTCTCATGAGCAATACACTGAAGGAACAATGCTCGGGTCTTGATCTTTCGATGGGGAGCCTGAAGAGAGAACCTAATCAGGAATTCGAGGACGATGATGCGGATGACGCGATGAGCAATCTGGGCAGCGAGGATTCCGATGGTTCGGCCGGTAGTATGAAACGGGGCGACACGACGGATCTTAGTCAACCGCAATCGGCACCAACGACAGCGAGATCGAGCAGAAGAAAGCCCGCTGCGCCGCAATGGGTTAATCCGGAATGGCAGGAGCCTGCTGCGAGAACGGGCGACGAGGTTATTATAAATGGCGTTTGCGTGATGCAGACCGATGATTACGGTGTCAAGAGGGAGAATGAAGAAACGGTCAGGGTGGAACCGACACCGGTCCAGGATCGTTACGAGGAGGACGGGGCGAGTGACGTTTCCTCGGTATCCGCTAACAATCCACAGGATCGTGAGAGTCCAATGACGACGAGCTTGAAATCGCCCCAAAATAGCCCCTCAACGTCACCGAGACTATCGCCAACCTCGTcgtcgcagcagcagcagcagcaacagcaacagcaacagcaacagcaacaacaacagccgCAACAACAAACGCAACAAACGACGGACGAGGAAATTCCAGCCAAGGACATCGTGAAGAACGAACCCGAGGAAACGTGGGATTACTGA
Protein Sequence
MRIREISQLVDEVSRLQQSLQRLQETSSQSTSRLEEELEARRQHISRLESKLERQRDYDDIKREISVLRSVDLSQIPTGEPGKSLEHLLMERTKALQQAETLKSPSTPDALGGLASPLQRAATASPHALGGGVGGAAGVVTGGSAAPPPVSLVSCSQQAIPSRSTPTPSSATSTASSLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQQHHHQQQQQQHQSQQQQQHPQQQQSHLQQQPLTLHSQNQALSQLQQSQPVVAAAVAVHQAFQQQQSMHSLHPSTTTNLNHLPSPTDNPSSSASLTNTPAKSNTPLLGGCLDATEKAPTPIPGHETPAPPTPSSTVALTSPSIPMVVNALQPPHSATKTTPTILDTLHTTNNTIMNGSSIGMLSGIMPASLPPKSPQEESCHNNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGIPAFGRGPQDGGTADMSDERLAHILSESGHLQMSRGEHDTSNDADSKSPSRLGCPSPFGKDRMDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVDDLRGPRDFPSSAMFPHFFSGGQGMQGMERTQDDIRLALDAYHRELQKLNVTPGQNPAGLTGLPGLPVLPGLLALQQQALQQHHMAANGGVVQDLSLGKMDPRGKMMNGVTDEEKDKMEEAMRHAGSAFSLVRPKQEPSGPQSTPGGSSASSPLGNSILPPAMTPNEEFTGAAAASPLQRMASITNSLISQPSTPTHHTSNQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAVQAAAQAAAAAAAAAQHQQDNQMQLGPPQPSPQHQSHPQPPPPLMLTPTGLHHSHAQLSIQELQKKQQLAQQQQQQQQQQQQQQQQQQQQQQQQMGLHSPHHQMVPSPLRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDPHNVDKLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHASSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEQQSPREPGAPFDPVQFRLLLNQRLLEIHKERLGIGNVPIPYGPYFNPNIAALMSNTLKEQCSGLDLSMGSLKREPNQEFEDDDADDAMSNLGSEDSDGSAGSMKRGDTTDLSQPQSAPTTARSSRRKPAAPQWVNPEWQEPAARTGDEVIINGVCVMQTDDYGVKRENEETVRVEPTPVQDRYEEDGASDVSSVSANNPQDRESPMTTSLKSPQNSPSTSPRLSPTSSSQQQQQQQQQQQQQQQQQPQQQTQQTTDEEIPAKDIVKNEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394913;
90% Identity
iTF_01306310;
80% Identity
iTF_01306310;