Rpad012224.1
Basic Information
- Insect
- Rhopalosiphum padi
- Gene Symbol
- -
- Assembly
- None
- Location
- scf7180000007884.885483:17564-18930[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2 4.7e+03 -2.0 0.1 1 16 170 185 170 193 0.78 2 2 1.2e-22 3e-19 69.1 3.3 2 49 315 362 314 363 0.96
Sequence Information
- Coding Sequence
- ATGAATCGTTATTCTAGCAAACATATTAAACTGACTAGTTTCGAAACTGTTGATTTGCAAGTACTATTGGAAACGTTTGGTCTAAATAGCAGTGGAATAAGATCTGAATTGCTTTGTCGAATAAATCAATTAATAAAGCGTAAACCAGATGGCCTTGACATTGCATTATTTAAATCAAAAATAATTGAAATATTTCAATGCAAAGTGAATAGTAACTCAAATCCCCTTTTTATTCAACCAAATCAGATTATGTATACGGGTCAAAAAATCAACAAAAAAAATACGAACCAACTGCAACAATATTATCAAAAATCAATGCATGTTAAGCCTCCTCAAAATCTAAATCTGTACAAGTTAAGAAAGCTACCATTTTATGAAAATATTGAAGAAATTATTAAGCTAACTCTTCTAAATAGCTCAAATGACAAATGTACATTAGTAAACCATCTTACAGGTATGAGAGAATATGTATTTACATTTAATATGTCTATAGATCAAATTAATATAATATCTTCAAATTGTGATATTTCAAAAACAATACCAGAATATCCCTATCAGTACCAAATTCGACTATGTCAAATAGAATTAGGACGTTTTGAAGTAACAGATTATTTTCCCAGTCAACTTAATGTTCGAGTTGGAGATACGCCTTGTCCTACTTATCCTAATGAGCGATCTAAATCGAGACGAACAGCAAGTCCTATCAATTGCACTCATGAATTAAAATTAAGTCCATTTGTTACAAACCTAATTAAAGTAAACTGGGTACCCGATGGGAAAATTTATGGTATTACCATGAATTTAGTTAAACAATTAAGTGCAGATAATTTAATAAAAAAACTTCAAGATAAAGAAGCAAGGAGTTCAGAAGATACTAAACATCAAATTATTAAAAAATTCACTTGTGTTAATCCAGATTTGGCCTGTACATCTCATCAATTTTCTTTGTTATGTCCATTGAGTAAAAATAGAATGAAGTTACCTGCAAAATCCGTTCATTGTGACCATATAATGTGTTTTGATGCAGATACCTTCATTAGAATGAATGAGAAAAAATCAAAATGGCTTTGTCCAATTTGTAATGCACCTTGTGTGTACGATGACATAAAAATAGAAAATTACTTTTTGGAAATTGTGACAAGCTCTAGACTTGAAGACGATGACAACAATATTTTAATTAACGCTGACGGATCATGGGAAAAAGAATTAAAAATAACTATCAATAATACACTTGTAAAATCTATTGATTTTGTGGATTTGGATAGCGACGATGAAAAATCTGGGATAAAAATAAAATAG
- Protein Sequence
- MNRYSSKHIKLTSFETVDLQVLLETFGLNSSGIRSELLCRINQLIKRKPDGLDIALFKSKIIEIFQCKVNSNSNPLFIQPNQIMYTGQKINKKNTNQLQQYYQKSMHVKPPQNLNLYKLRKLPFYENIEEIIKLTLLNSSNDKCTLVNHLTGMREYVFTFNMSIDQINIISSNCDISKTIPEYPYQYQIRLCQIELGRFEVTDYFPSQLNVRVGDTPCPTYPNERSKSRRTASPINCTHELKLSPFVTNLIKVNWVPDGKIYGITMNLVKQLSADNLIKKLQDKEARSSEDTKHQIIKKFTCVNPDLACTSHQFSLLCPLSKNRMKLPAKSVHCDHIMCFDADTFIRMNEKKSKWLCPICNAPCVYDDIKIENYFLEIVTSSRLEDDDNNILINADGSWEKELKITINNTLVKSIDFVDLDSDDEKSGIKIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01329460;
- 90% Identity
- -
- 80% Identity
- -