Rpad024550.1
Basic Information
- Insect
- Rhopalosiphum padi
- Gene Symbol
- THAP9_5
- Assembly
- None
- Location
- scf7180000010531.24127:6035-18107[+]
Transcription Factor Domain
- TF Family
- THAP
- Domain
- THAP domain
- PFAM
- PF05485
- TF Group
- Zinc-Coordinating Group
- Description
- The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-10 1.2e-07 33.0 1.0 1 85 6 82 6 84 0.71 2 2 3.2 6e+02 1.8 0.3 11 34 205 239 197 255 0.63
Sequence Information
- Coding Sequence
- ATGCCTGGCAGTACGTGTCAATATTTTAACTGTGGTAAATCATCCAGTAAATTTCCGAATTTAAAATTTTATCGTTTTCCAAAAGATAATAGATTAGAAACGTGGAAAATTAATTCAGGAAACATAAAATTACTTTCGATTGATAAAGAAAAGTGTTATAATCGGTATTTATGCCAGGAGCATTTTTCACCTGATTCATTTATGAATCTGGTTACAAAAAAATTAATAAAATCAGCTATTCCTTACAAATATAATGAAATTATTGACCAACCGACATCGAGTGGAAGTAGTTTGAGTGCTGGACTGGTTGTTTCCGATTTTTCGCCTACAACTCCCATTAGATTTGAAAAATCAAAAGATTATACAAAAATCAGAAATACAGAGTGTGTTGAGCTTAAATTTCCTAGTCCTTCAAAAGATATTACAACCGATATATCCGATATAATTGATATGCCTAGTACTATTACACCAAAACGAAAACAAAATTATAATATTGACATTGATACTCCCAGGAAAAAAAAATTAAAACAAAAAATATTTGCACAACAACATCAAATGCAAAATAAAATAAAACACATTTCCAAATTAAAAAATAGAATAAATAATTTAAAAAACCGTAACCAATTAAATAATTTAATTTCCACACATAATTTTCCGTCCAATAATTCAAGAACTATTGTTACTATGCAGTTTAGAAATAAACGTCGCCAATGGACCACTGAAGAAAAAAATTTAGCATTAACAATGTTTTATAAATCTCCGGCAACATATAATTTTTTAAGATTACAGAACCTTAACTTACCAGGTCCGTCGACAGTCCGAGGTTGGATTGGTCAATCTAAATTTTTACCAGAATATTCAAAAGATTTCGACTTTATAGAAGGTTACGAAGATTTGGGTAGATACGGAAGGACAAGTAATACTGCAAATAGCTGTTTAGTCTTCATGGCAAGAGGTATATATTCACCTTGGAAAATTCCTGTTTCTTATTTCCTTGCTCATTCTGCTGTTAAACATACAGTTCTCAAAAACTTAATTATAGATGTATTGCAAGAACTTTTTGATATTGGTATTTCACCTAAAGTTTTAATTTGTGATCAAGGTTCGAATAACCAAAGTGCCCTGAAGTCGTTAAATGTCACGGAAAATAAGCCTTATTTTTATGTAAATGAAAATAAAATTATTTCTTTATTTGATACGCCCCATCTCCTTAAAAGCGTAAGAAATAATTTGATAGGAAACACTCTTAAAAAAAATGAAAAAATAATATCTTTTAACGATATCATAGCAACTTATAATATAGACAAAAAAAATAAAAAAAGTAACGCTCTACTTAAAATAACTGAGGCTCATATACACCCAAACTCATTTCAAAAAATGAGTGTGAAATTGGCTACTCAAATTTTTAGCAACTCAATGGCATCTGCTTTGCGAACATGTATATCTGTAGCAGAATTAAAAAGTAAAACTGCATCTGATACAGCAGATTTTATAGATTTTATGAATCATCTATTTGACTGTCTAAACAGCAGAAACTTATTCAGTAACAATCCATATAATTGTGCATTGACCAATTCAGGCATAGTTAAACCATTCCTAGTAAATGCAACAAATTATTTCAATGATCTTTTCAAAATTAATATTAAAGGCAAAGTAACTCGCCCACCATGCTTTAGCGGATTCACTCAAACTATCAACGGAGTTTTGAGTTTTTTTGATGATGAATCGAAAAACAATAATATACAGTTCCTATTTACAAATAGATTAAATCAGGATACACTAGAAAACCTTTTTTCAATTTTCCGACAAAAAGGCGGGTATAATAAAAATCCTACGGCGAGAACAATCAGAACTTCATTTAGAAGTACATGTGTGTTTTCCTTAATAACTTCAAAAGGTACTATTTGTGAAAGTTCTCAAAACATAGACGATCCTGCCGTAGTACAAGATGTTATTACACTTGACAAATCCATTCATGAAGAGTCAGAATCGTGTTCGGACACAGCATCCTCGTCTTCGTCTTCCTCGCCCATAAAAATAACATCAGAAAAATGTAACAAGGAAAAAGTAAATAAAACTATTACATTAGAAGATTGTTCTGTGACATATTTTTCAGGAAATATTCAATGTTTTTATGATAGTGTCAATAACGATGATAATGACTACTTACAACTATCAGACCATTCGGGATTAGATGAATCTACATTACCAAATTTGAATGTTGAGTACGTAAAATCTAATGAACCTACATTATCAGGGCGCCGAGTAGTAGACATAGAACATTTTATGAAACAAATGATGGAACTGGGTAAACATGGTAGTAAATGTACTATGGGACGATTTGTACTAATCAAAGAAGTACAAAATGGTGTAGGATTTAAACTTTATTTCAAATGCCATGTTTGTGACCGTCATCAAATTGTCACATCAGACAGAGAATCATCTGTAGATAATGTCAATAATGCGTTAGTTTGGGGAGCATTATCAATCGGTATTGGACATCGTCAGATTGAAGATTTACTCGCAGTTATGGACTGTCCATCACCATCGTTTAAAAAATTTAAACGACATGAAGTTATTATAGGAAAGGTGTGGGAACAACAAATTTCAGAAATGTTGAAAAAAAATGGAGAGCAGGAAAAAAAAATTGCCATACAAAAAGGAAATTTATATAAAGGAACTCCTTACATCACAGTGATAGGTGATGGTGGTTGGGCTAAAAGAAGTTACGGACATGGTTTCAATTCTCAATCAGGCGTGGGAATAATTATTGGTGCAGAAACAAAAAAGCCCGTCTATGTAGGTGTAAGAAACAAATATTGTAGTACATGTTCTTCTGCATCCAAAAATAATAAAAAAATAGATCATTTGTGTTTCCGAAATTATGATGGTTTAATATATAAATATTATATTGGCGATGGTGATTCAAGTGTGTATGCCAGAATAGTTGAAAAAGTATCGTATGGTCGAGATGTTATCAAATTAGAATGTGCTAATCATATAACTCGTAATCTCCACGATGGCCTACGAAAATTGGTGGCAAATAAACATTTCCCATTACATGTGCGCAAAGTTTTAACTTATGGTTCTCCATCTCCCTTAGAAAGATTGGTTAAAGGGGTACGGACTGCAATTAAAGAGTGTGGAAAATCACATAATGTAAACATACTGCGAGAAGATTTAAAAAATGCACCATATCATGTTCTCGGTTCTCATAAAAATTGTCGTCCTACATATTGTACACGGTCAAATATGAATGAAAAGGACAATGTGCCATTAATGGAAAGTGGCAAAATAATGTCAGAAATTTTAGCAATTGTTGATAAAGTAACGAGAAAAGCCGATCGTCTAGTTTTCAACACTACAACTAATATAGCTGAAAACTTTATGAGCTTAGTTGCAAAATTTACTGGCGGTAAAAGAGTAAATTATACCAAAACAGGCTCATATCAAAGAAGAGTATTAGGTGCAACCCAAGTTCACTCTAGGGGCCAGTCTTGGCATTTAAGTCCATGGAAAAAATTATCAGGAAAAAGTCCCGGCAAGTTTTTTAAAAAAAATTTAACGAGGCGTATTGCAATGACAACTTTAAACTCAAAGTATAAAAAACAAAAAAAAATTAGATTTAAAGTAAGTGGAGGTGACAAAAGTACAGTGAATCATGATTTTGATTACGGTCCAGACGCTGCTGGGCTGGATATGACTGAAGAGGATTTTAAATTTAACGTCAATAAAAAGTTAGAAGAGTTAAAAAAAGATTCTTTTTCAACCGAAACAATCGAACAATTACAAAAAAACACTATTGGTCAACATGATAATGTAGTCTGGCACGAAGCAAAGAAAAATAGACTCACCGCTTCTAATTTCGGGACAGTTATTTGTAGAAAATCAACTACATCTTGTCATAATTTAGTGAAAACATTATTATACAGTAAAAATATTATTTCGAAACATATTGAATTTGGACGACAAAATGAAAAAGTGGTTATCCGACAATTCGAAAATCAGTATAACAAAACTGTAAGACCGTGTGGGTTGTTTGTTGATGAACAATATCCATTTTTGGGCGCAAGTCCCGATGGTTTAGTTGATGACGATAAAATAATAGAGGTCAAGTGTACGCCGTCTATAGGACAAAAAACCTTAGAAGATGCAGCTCTTGATAAAAAGTTGCAGTTTTGTTTAGAGCTTACAGAAACAGGTCAACTTAAACTCAAAGAAAACCATAAATATTATTGGCAAATTCAAGGCCAACTAAACATTACAAAAAAAATAGAATGTATTTTTATTTTATTCAGTATGGGAAATAATCTTTATGTGCAGAATATCAACAGGGACGAATATCTTTGGACAAATAAGATGCTTCCAAAATTAATCAATTTCTACATGGACTGTATGTTGCCTGAAATTGTAGATCCTCGAGTTCCAAGAGGTTTACGAATACGAGATCCGGCGAAAATAACGGAAGCACAATTTCAAATAAAAAAGAAATTTAAAAATTTAAATCCGAGGTCCACCCCACCCCCTAATGTACAGCAGAGCGATATTCACTTACCCGCGTTTTTTACATTTTATTTACAGGAAAATAGTTTTAATAACGAGTCACAACCAACTGAACCAGCGAGAAATGCATCTCCAGAAACAAATGTATCAGTGTCACTTTCAGAGATTGTGCACCAACATGACATAGGATTATATGTGAATAAACCTGCAACTGAAACTATTGACTTGTTTCCGGGACTTCAAAATTTGATTTGGACACCTCCAGAAGACTATAAATTTCCTGTTTCCGAAAAAAGAAATTTCAAATTTCAAAGAATGTTAACATTTTTAAAAATGACATCTAACCCAGATATCGTAATAACTTGTGGTTTTCAAACCATATTTTACGAAGTTGTACAAAATAATAAAAAAGTCATGAACTTGGCTAACAGTGGACATGTAATAAATTGCACTGAAGTAATAATTAATGATGGTATTTCATTTATTAAATCACTTGTAATTAGACAAGCATCTGTTAGTAACCCACCATATGAAGTTAAACTTGAATTGGACTCTACTAGAAATGTTACTAATGCAGAATGTCAGTGTCCAGCTGGTGCTGGGAAGAAGTGTAAACACATTGCTGCATTGGTAACACACTTCATTAGAAGACAAGCATCTGTTAGTAACCCACCATATGAAGTTAAACTTGAATTGGACTCTACTAGAAATGTTACTAATGCAGAATGTCAGTGTCCAGCTGGTGCTGGGAAGAAGTGTAAACACATTGCTGCATTGGTACACTATATTAATCAAGAAGATGCTAAGTCTAAAACAGATTTTGAGAAACAATGGGGGAAACCTTCAAAAGCTGTAGAAGTAAATCATATTGAGTTAGTTTCAAACTATAATATTCTTGATATTCCATGTAGCTTCAGTAAACTTCTAAGTGTAGAAACTAAAACAGAATTAGACAGAGAATGTGAAAGCTGTGTAAAATGGTTAGTAGATCAAACAGAAATAAATGAATTATATTCCAGACATGGACCAAGTTTAGATTTTATTTTGGTTAGACAAAAATTAATTAACTTTTCTAATTTCAACAATTTTTACAAGTTTCCATTAAATATAAATGAATATAATTACTATTTAAACAATATTGTTGTCAATGACAATGAAGTGAAAAAGATATTTATTCAAACTATCAAACAGTCTGAATCAAAAACATGGGTTGAACAACGAAAAATAAGGATTTCAGCTACAAAAACTCATCAAGTTATTAATACAAGAATGTCTTACCAAAAGGTTGCTAATATTTTGATGTCAAATTCTGTACTTAAAGGTAAAGCATCAATAAATGTGTGTTATGGTATAATGACTGAAAAAACTGCAATTGAATCTTACTTAAAAACATATACTGAATGTGATTATATTGAGTGTGGTTTAATTATTCATACGGAATACCCATGGATTTGTGCTTCTCCAGATGGGTTAATTATAAAGAATGGTAAAGTTGATAGAGTCTTGGAAATTAAATGCCCTATTTCATGCACAAATACACCTATAGAGACTGGTGGAAAATTAAACTTGAGTTATCTGAAATATGACAGTTATGGTTTAACAAAATGTGACTTATTTATTTTTAATTATGTTAAACCACTTCTGATTACTGTAGAAAGAAATAATAATTTTATAAGCTTGGCAGTATCAAAAATTGAGCAGTTTTATTTTTCCACATATTTGACAGAACTTTCATTAAAAAAATAA
- Protein Sequence
- MPGSTCQYFNCGKSSSKFPNLKFYRFPKDNRLETWKINSGNIKLLSIDKEKCYNRYLCQEHFSPDSFMNLVTKKLIKSAIPYKYNEIIDQPTSSGSSLSAGLVVSDFSPTTPIRFEKSKDYTKIRNTECVELKFPSPSKDITTDISDIIDMPSTITPKRKQNYNIDIDTPRKKKLKQKIFAQQHQMQNKIKHISKLKNRINNLKNRNQLNNLISTHNFPSNNSRTIVTMQFRNKRRQWTTEEKNLALTMFYKSPATYNFLRLQNLNLPGPSTVRGWIGQSKFLPEYSKDFDFIEGYEDLGRYGRTSNTANSCLVFMARGIYSPWKIPVSYFLAHSAVKHTVLKNLIIDVLQELFDIGISPKVLICDQGSNNQSALKSLNVTENKPYFYVNENKIISLFDTPHLLKSVRNNLIGNTLKKNEKIISFNDIIATYNIDKKNKKSNALLKITEAHIHPNSFQKMSVKLATQIFSNSMASALRTCISVAELKSKTASDTADFIDFMNHLFDCLNSRNLFSNNPYNCALTNSGIVKPFLVNATNYFNDLFKINIKGKVTRPPCFSGFTQTINGVLSFFDDESKNNNIQFLFTNRLNQDTLENLFSIFRQKGGYNKNPTARTIRTSFRSTCVFSLITSKGTICESSQNIDDPAVVQDVITLDKSIHEESESCSDTASSSSSSSPIKITSEKCNKEKVNKTITLEDCSVTYFSGNIQCFYDSVNNDDNDYLQLSDHSGLDESTLPNLNVEYVKSNEPTLSGRRVVDIEHFMKQMMELGKHGSKCTMGRFVLIKEVQNGVGFKLYFKCHVCDRHQIVTSDRESSVDNVNNALVWGALSIGIGHRQIEDLLAVMDCPSPSFKKFKRHEVIIGKVWEQQISEMLKKNGEQEKKIAIQKGNLYKGTPYITVIGDGGWAKRSYGHGFNSQSGVGIIIGAETKKPVYVGVRNKYCSTCSSASKNNKKIDHLCFRNYDGLIYKYYIGDGDSSVYARIVEKVSYGRDVIKLECANHITRNLHDGLRKLVANKHFPLHVRKVLTYGSPSPLERLVKGVRTAIKECGKSHNVNILREDLKNAPYHVLGSHKNCRPTYCTRSNMNEKDNVPLMESGKIMSEILAIVDKVTRKADRLVFNTTTNIAENFMSLVAKFTGGKRVNYTKTGSYQRRVLGATQVHSRGQSWHLSPWKKLSGKSPGKFFKKNLTRRIAMTTLNSKYKKQKKIRFKVSGGDKSTVNHDFDYGPDAAGLDMTEEDFKFNVNKKLEELKKDSFSTETIEQLQKNTIGQHDNVVWHEAKKNRLTASNFGTVICRKSTTSCHNLVKTLLYSKNIISKHIEFGRQNEKVVIRQFENQYNKTVRPCGLFVDEQYPFLGASPDGLVDDDKIIEVKCTPSIGQKTLEDAALDKKLQFCLELTETGQLKLKENHKYYWQIQGQLNITKKIECIFILFSMGNNLYVQNINRDEYLWTNKMLPKLINFYMDCMLPEIVDPRVPRGLRIRDPAKITEAQFQIKKKFKNLNPRSTPPPNVQQSDIHLPAFFTFYLQENSFNNESQPTEPARNASPETNVSVSLSEIVHQHDIGLYVNKPATETIDLFPGLQNLIWTPPEDYKFPVSEKRNFKFQRMLTFLKMTSNPDIVITCGFQTIFYEVVQNNKKVMNLANSGHVINCTEVIINDGISFIKSLVIRQASVSNPPYEVKLELDSTRNVTNAECQCPAGAGKKCKHIAALVTHFIRRQASVSNPPYEVKLELDSTRNVTNAECQCPAGAGKKCKHIAALVHYINQEDAKSKTDFEKQWGKPSKAVEVNHIELVSNYNILDIPCSFSKLLSVETKTELDRECESCVKWLVDQTEINELYSRHGPSLDFILVRQKLINFSNFNNFYKFPLNINEYNYYLNNIVVNDNEVKKIFIQTIKQSESKTWVEQRKIRISATKTHQVINTRMSYQKVANILMSNSVLKGKASINVCYGIMTEKTAIESYLKTYTECDYIECGLIIHTEYPWICASPDGLIIKNGKVDRVLEIKCPISCTNTPIETGGKLNLSYLKYDSYGLTKCDLFIFNYVKPLLITVERNNNFISLAVSKIEQFYFSTYLTELSLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -