Rpad022744.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Rhopalosiphum padi
Gene Symbol
onecut
Assembly
None
Location
scf7180000008569.489720:437857-463163[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.7e-38 1e-33 115.7 0.6 2 78 590 666 589 667 0.97

Sequence Information

Coding Sequence
ATGGAAAACGTTCACAACATGGCGCCAGAGTCGCCGCTCAACGAAGTGGTGGTCGAGACAATCGATTCGCCGCAAGACGTGCGGGCGCACGTCGACGCCGGTCGGCAGTCCGCGTGCCCCGTCGCCGAGCCGCCACCGACACGCGAACTGTGCATCACGCGAGTGCCGCGATCGCAGCCCGCCAGCAGGATCGTCTGCCATGCACGTTGTTCGCGGCCCGTCCAGCAAGACGACGACTCGGACGATGACCTGATGGACGACGACGACTTGGACGAAGAAAACGACGACGACCACAACGACCACAATAACCACCACCACCAGCAGCAGCAGCAGCAGCACCATCACCACCAACAGAACAACCGGGGCCACCAACACCAACAGCACCACCAGAACCAGCACCACCAAGTCCACCATCACCAACAACACCACCAGAACCAACACCATCCGCACCAACAGCAGCAGCAGCAGCAGCAGCAACACCATCACCAAAACAACGACCGGTCGCCGGTCGAGAGTAACGGTGGTGGCAGTCGCCGCGGCGTAGGCGGTACGGTCGTGGTCAGAGGTGGCTGCGGTGGCGGTGGCGGTGGCGCCGGTAGCGGCGGTGTCGGCAGTGGCGGAGGCGGCGGTGTCATCGTCGAAGACGTCAAACCGCCCGAGAGCACCATCACCGTGATCGTTCACCACCCGGACGACGACCGGGCAAACCGATCCGCCAGACTCAACCCCAGACATTCCGTCAGCGTGGCCGGCATGATCGAGTCGCAAGACTACCACCGCTCCGGGACCGGCAACAACAGCGTGCTCCAGCTGCACCACCAGCAGCAACAGCAACAACAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAACAGCAACAGCAACAGCAACAGCCCGAGCCCACTTACCAGACGCTCACGTCGGTCAACGGCAGGATGTCGCCGCCCGGCTACAGCCCCAACTCGTCGTACGCCACGCTCACGCCGCTCCAACCGCTGCCGCCCATATCGACCATGTCCGACAAGTTCGTGTACGGTCACTCCAACAACGTGTCCGGTTCGTTCACGGTCATGCAGAACAACATCGGCGGCCTGGGCATGGTGGTCAACAGCCCGTACACGTACGACAAGATGGGCATGCACTCGCCCAACCACTATTCGCCCACGCACATGCACCACATGCCGCCGCAACAGGGCTCGCCGATATCGCCGCAGAGCGCGTCGTACAGTCAAAACGGCGGCGGCGGTGGCGGCGGCCTCAACTCGCCGCAGAAGAGCATGTCGTCGCCGAACAGCTGCTACGACTCGCCGTACACGCAGATCGGCCCCGGCGGCCGGTCGGGCACGGGTAACGCGATGCACAGTCCCGACCTCAGCCAAAACTCGGGGTCGCTGCACTCGCCGCCGATGTCCAGTTACGGCGGCACCACCACGCTGTCCAACGTGAACGGGCTGACCACCATCACGCCGCATCCCGGCCGAGGCGGCGGTGGCGTCGTGGTGTCTCCCAGGCACTCGCCGTCGCTGGTCATTCACCCGATCATACAGCCCCAGGAGGTGGTGGTCACCACGTCCTCGCCCTCGCCGCCCGACCACTCGCAGAGGATGCAGATGATGCACCAACAGCAGCAACAGCAGCAGCAGCAGCAACAACTGCAACAGCAGCAGACCACGCTGATCAAGACGCAATCGATCACCACCACCACCACGGTTCTGGTGCAGAACGCGTCGTCGGCGTCCGGGTCGAACGGCAGCGGTTCCGACATGGAGGAGATCAACACCAAAGAGCTGGCGCAGCGGATCAGCGCCGAGCTGAAACGGTACAGCATACCGCAGGCGATATTCGCGCAACGGGTGCTGTGCCGGTCGCAGGGCACGCTGTCCGACCTGCTCCGCAACCCCAAGCCCTGGTCCAAGCTGAAATCCGGCCGGGAGACGTTCCGCCGCATGTGGAAGTGGCTCCAGGAACCCGAATTCCAGAGGATGTCGGCGCTCCGCTTGGCAGATGATTCTTCTTCTAACCTTGGTCAAGACTTAGAAGGTATGTTATTGGCAGAAAACGGACTGCAAAATGTTACAACACCAAATGTCGGAAATTACATCAACAACATGGTAGCTCAAATTCCACAGCAAAACCCTCCTTGCAAACGAAAAGAAGAATCCCAACCTATTGTTCCTGATCATTCAACTGCACCCAAAAAACCACGTTTGGTCTTTACTGATCTTCAACGACGAACACTACAAGCTATTTTTAAGGAAACGAAAAGGCCGTCAAAAGAAATGCAAGTGACCATTGCTAGGCAATTAGGTCTGGAACCGACTACAGTCGGCAATTTCTTCATGAATGCCAGGAGACGATCGATGGATAAGTGGAAGGATGAAGATCCAAAAGCAATGGCGGCATCGAACCACCATCAAGACGACATTGTAGTTAGCATGCAAACAGGGACACATATGGGTAACCACCAGTCTGAAGTGTTGTGA
Protein Sequence
MENVHNMAPESPLNEVVVETIDSPQDVRAHVDAGRQSACPVAEPPPTRELCITRVPRSQPASRIVCHARCSRPVQQDDDSDDDLMDDDDLDEENDDDHNDHNNHHHQQQQQQHHHHQQNNRGHQHQQHHQNQHHQVHHHQQHHQNQHHPHQQQQQQQQQHHHQNNDRSPVESNGGGSRRGVGGTVVVRGGCGGGGGGAGSGGVGSGGGGGVIVEDVKPPESTITVIVHHPDDDRANRSARLNPRHSVSVAGMIESQDYHRSGTGNNSVLQLHHQQQQQQQQQQQQQQQQQQQQQQQQQQPEPTYQTLTSVNGRMSPPGYSPNSSYATLTPLQPLPPISTMSDKFVYGHSNNVSGSFTVMQNNIGGLGMVVNSPYTYDKMGMHSPNHYSPTHMHHMPPQQGSPISPQSASYSQNGGGGGGGLNSPQKSMSSPNSCYDSPYTQIGPGGRSGTGNAMHSPDLSQNSGSLHSPPMSSYGGTTTLSNVNGLTTITPHPGRGGGGVVVSPRHSPSLVIHPIIQPQEVVVTTSSPSPPDHSQRMQMMHQQQQQQQQQQQLQQQQTTLIKTQSITTTTTVLVQNASSASGSNGSGSDMEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLADDSSSNLGQDLEGMLLAENGLQNVTTPNVGNYINNMVAQIPQQNPPCKRKEESQPIVPDHSTAPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDEDPKAMAASNHHQDDIVVSMQTGTHMGNHQSEVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01031846;
90% Identity
iTF_00135946;
80% Identity
iTF_01305448;