Rpad026054.1
Basic Information
- Insect
- Rhopalosiphum padi
- Gene Symbol
- ARID4A
- Assembly
- None
- Location
- scf7180000010698.152306:90770-108100[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-22 1.3e-18 67.7 0.1 1 83 288 365 288 367 0.91
Sequence Information
- Coding Sequence
- ATGGTAGATTCGGATGAACCACTTATTCTTGCTGTTGGCACAGAAGTTTGTATCAAGTCCAAAGGGGCATTTTGTGAAGCAAAAATTGAAAAAATATCAGAAAATTACAAATGCAAAGTTCAACAATATGCTGATAAAATATCCAAATCTTACACAGGTCTTCCAGTTAAAGGACAATTAAAGTTGGGAGCAAATATTGCCTTAAGATGTCAAGATACAAATGATATAGTTCAAGGTAAAATTTTAAAAGTACAAGATTATAGTGAATACACAGTTGCATTTTATAATGGTGATAAAGCTTGCTTAAAGAGAAAATCAATAAGTTTGAAAAGTAAAGGATACTTTGATAATAGCACTAATCTTGATCAACTTCCGCTTAACAATCCAGAACACAGTGGTATAACTCATGATGTACAAGATCGCAGAAGTCAAGAACATAAAAAAGATTTTGGGGAAATTAGGAAAGAAGAAGCTTCAGCAACTGAGGAAAAAGATATTGGAAAAGTTGTTTGTGTTGTAACTGGTACAAAAAAGAAATTAAAAGATAATTGGTTTCCTGGTTTAATAGTTGCACCCACTTCACAATCCTCGGTCAGAACTAATTTTGTAGAAAACCGCCTAGTTCGTTCATTTAAAGACGAAAAATACTATGCAGTATCAAAAAACGAAATAACTGAATTTACAAAAGAAATTGGTGCTAGAGTGGAAAATTCTACGCTTAAAACTGCTGTAAAAAAAGCCAATTGTTATCTTGACAATGATGAACTTCCACCACACTGGGATCGAGTTTTTTTATTTGGTGTTGATACAATTTGTACTACTACTTATGATGGCAATAATTCTGATGAAGAACCAATTGAAGAAAAAGATCATTTTGTCGCACAGTTAATTAAGTTCATGGATGACCGAGGAACTCCTCTTAATCAAGCTCCAATGATTGATGAAAAGGATGTTGATTTATATAAACTATTTAAGGTTGTCAATAACTGTGGAGGATATAACAAAGTTGATAAAGATAATCAATGGCTATTTGTATCAATTAAAGCTGGTCATGAACGACAATCATCTTTATCTGTTAAAAATTTCTATCAAAACAAGAAGAAACTAAGACAACTAGGGATAGACAATGCTAGTGAAATAGTTTTAGACAGAGATGTTAAGAAATTTGTTTACAACCATGGGCTCAAAAGCTGA
- Protein Sequence
- MVDSDEPLILAVGTEVCIKSKGAFCEAKIEKISENYKCKVQQYADKISKSYTGLPVKGQLKLGANIALRCQDTNDIVQGKILKVQDYSEYTVAFYNGDKACLKRKSISLKSKGYFDNSTNLDQLPLNNPEHSGITHDVQDRRSQEHKKDFGEIRKEEASATEEKDIGKVVCVVTGTKKKLKDNWFPGLIVAPTSQSSVRTNFVENRLVRSFKDEKYYAVSKNEITEFTKEIGARVENSTLKTAVKKANCYLDNDELPPHWDRVFLFGVDTICTTTYDGNNSDEEPIEEKDHFVAQLIKFMDDRGTPLNQAPMIDEKDVDLYKLFKVVNNCGGYNKVDKDNQWLFVSIKAGHERQSSLSVKNFYQNKKKLRQLGIDNASEIVLDRDVKKFVYNHGLKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -