Rpad022874.1
Basic Information
- Insect
- Rhopalosiphum padi
- Gene Symbol
- -
- Assembly
- None
- Location
- scf7180000008174.731587:84496-90286[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.84 1.2e+03 0.2 0.5 33 49 405 421 400 423 0.76 2 2 6.2e-08 8.6e-05 23.0 17.6 2 51 418 467 414 473 0.84
Sequence Information
- Coding Sequence
- ATGGCATACTATTACTATTACCAAACACCACCCGACCCACTATCACCTGTACCAACCACAGAAGAATTATCACCATCACAGCCTCCTTTATTAATGCTATCATCTCCACAGCAACAACAACAGTTAAATATACCACTTCTCACACCAGTTATTCCATCGGTTACAACATCAATGTCAATGATGACGACGACTACTACTACTTCTACAGAGCATAATGAACAGCAGCAGCTACCCACTCCAAATACATTCATTAGGCATTGTGATGATATGGGTTTATTTCACGATTTACAAAACATTGTAGTAATGTCTTCGTTAACTGGACCAACAGGTGATACAACTATTAGTACAGCCCCTACATCTAATGCTGCTACGGTAATCACCACGGCAACATCAACTGGACAACCTATTTCTTCAAATTTATTTGACTCATCATCGACAGCAATTGTGACAACCATGATGATGGCTAATCCATTTGACGAAACATTTAAACAAGCTGTATTGCAACAACAACAACAAAATGAAGCTAATCCATCAGAAAATCTTTTCAATCACAATGATAACAATGATGGTGATTTAAACACCCCATTCATAGCGACAACTACTGTTGTTAACACATCCAATAACAATAGTATTGTAAAAACTTCCACAATGATAGATATGATTTCTACAACAACAGCATCAGTTGAATCTAATAAGATGAATACAACTACTGTACCTCAATCTCAAGTAGAACCTCAGCAAAATGTTTATATCACGTCAACAGCAGAAGTGCCAACTAGAAGTGTCTTAGTTATGATGGTGGAGCATCCACAACAACAATTACGTAACTCAACTCTTCCTATACAACCTGAACATCAACCTCACCAACAATTAATCGATCAGCATAAATTCATTGTTCCGACAACTACAACCACAACTAGTGTTATTGACACAACAACAATAACACACCATGATCAAGATTTCTATGATGAAGAAATTGATGTTGATAATGGCCGTGTAATCATCAATGTCAATAATGATTCAAATACAATTAAACAGACTCTTAAACAGAATCTATTAGTAAAGCAACTGCTACAGAAGCGCCAGAAGCCTTCACTCATTACTGAAAGCCGTGATAAACTCGGTCAACTATTGGAACAGCAGAATAAAGACATTGATATTGTTACAAATATTGATAGAATAGAACATGAAAACTATAATAGTAATGGCCAGGAAGATGAAGACTGCAATAGTCGAAAGCAGCAGTTAAAACAGAAACGAAAACAAGAAATGTTAGAAAGAAACAGGTCAGCCGCGAAACGGTGTAGAATAAAGCGAAAACAGAGGTGGGAGCTACTTTCTGAAGAAAATCGGAAACTGAAAATCGAAAATAGCCGTTTGCGTGAAGCTCTTTCAAAACTTGTAAGCCACAGATGCAGTAACTTACAACAACATCAAATAGAACAGCCTGAGATAATACAAGGAATATTCAAACATAACAATGATGTTTAA
- Protein Sequence
- MAYYYYYQTPPDPLSPVPTTEELSPSQPPLLMLSSPQQQQQLNIPLLTPVIPSVTTSMSMMTTTTTTSTEHNEQQQLPTPNTFIRHCDDMGLFHDLQNIVVMSSLTGPTGDTTISTAPTSNAATVITTATSTGQPISSNLFDSSSTAIVTTMMMANPFDETFKQAVLQQQQQNEANPSENLFNHNDNNDGDLNTPFIATTTVVNTSNNNSIVKTSTMIDMISTTTASVESNKMNTTTVPQSQVEPQQNVYITSTAEVPTRSVLVMMVEHPQQQLRNSTLPIQPEHQPHQQLIDQHKFIVPTTTTTTSVIDTTTITHHDQDFYDEEIDVDNGRVIINVNNDSNTIKQTLKQNLLVKQLLQKRQKPSLITESRDKLGQLLEQQNKDIDIVTNIDRIEHENYNSNGQEDEDCNSRKQQLKQKRKQEMLERNRSAAKRCRIKRKQRWELLSEENRKLKIENSRLREALSKLVSHRCSNLQQHQIEQPEIIQGIFKHNNDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00135071;
- 90% Identity
- iTF_01328367;
- 80% Identity
- -