Rpad004211.1
Basic Information
- Insect
- Rhopalosiphum padi
- Gene Symbol
- Xbp1
- Assembly
- None
- Location
- scf7180000007988.728809:638664-643638[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-14 1.2e-10 41.8 8.5 1 64 55 118 55 119 0.96 2 2 0.071 99 3.6 1.0 39 55 107 123 105 125 0.73
Sequence Information
- Coding Sequence
- ATGGCGCCCAACATTATTCGACCTAGTCAAATGCTGATATTCAACTCAGCCATGTGCTATGTCAAACAGCGACAGCACCCGGCCGCTGGTGACATCGACGGCGGATCGTCGATGTCATCGAAATCGCCGCCGGCCAAGAGGACGTACGTAAAAAACATCTCACCTGAGGAGAAAATATTGCGCAAGAAATTACGAAACAGAGAAGCAGCACAATTATCTAGAGATAAAAAGAAAGCACAATTCAATATTTTATCAGGAATGGTTCATGGGTTAAGAAAAGAGAATGTACATTTAAGAGAAGAAATAGAAACTTTACGAGCCAACCAAGAGCAATTGATCGCCGAAAATGAAAGATTACGAGAACAACTTTCCACTGAGTCATCCATACCAAAATCAACACCCTCTGCAGAAGGGCAAACGGAATCGAACATCTTGTTTGATGCTCTGTTGTCAGATTCTGTTCCTATTACTGACCATTCCATCCTACATGATCTCAAACTTCCAGACGACGATGATGATATGGACTGGCTTGACAACAATGTTTCAAAACGTTTGGAGAAAATTGCTGATGAACTTCTCGGCGAAAGTTTCCTTAATGAATGTTCTCTTGATGAAATGGTGGGGGGCACATCAGAAGTCATGGAACCCGGCCAAAATATTAATTTACCCAATGCAAACATAAGTGATGATGATCCAATATTCATGCTAAACACAGACACAGAAAGAATTCTAGATACAGTTAAGATTCCAACAGAAGAAATGCAAATTTCAGCACCAAACATAGATGAATCTGAAATTGAAGAACATTCCGAAGACAAAAGTAACTCTTTGGAACGTTTTATTATCGTAGAAGAAGCTGTTGAAGAAGTAACAACAACCTATGATGAACACATTCTTGAAATATGCCAGGAAGATGATATTGACACAGAACAGTATGAAGACATTGGTTATGAATCGCTTAGCTCTCCCGAATATGATTACAGAACACATTATAGTACACCACTAATATTAACAGATTTACTTTCATAA
- Protein Sequence
- MAPNIIRPSQMLIFNSAMCYVKQRQHPAAGDIDGGSSMSSKSPPAKRTYVKNISPEEKILRKKLRNREAAQLSRDKKKAQFNILSGMVHGLRKENVHLREEIETLRANQEQLIAENERLREQLSTESSIPKSTPSAEGQTESNILFDALLSDSVPITDHSILHDLKLPDDDDDMDWLDNNVSKRLEKIADELLGESFLNECSLDEMVGGTSEVMEPGQNINLPNANISDDDPIFMLNTDTERILDTVKIPTEEMQISAPNIDESEIEEHSEDKSNSLERFIIVEEAVEEVTTTYDEHILEICQEDDIDTEQYEDIGYESLSSPEYDYRTHYSTPLILTDLLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00135064;
- 90% Identity
- iTF_00133992; iTF_01328360; iTF_00135064; iTF_01304609;
- 80% Identity
- -