Rpad013115.1
Basic Information
- Insect
- Rhopalosiphum padi
- Gene Symbol
- HLF
- Assembly
- None
- Location
- scf7180000007808.1449560:875509-932774[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-17 4.7e-14 52.7 10.9 1 64 248 311 248 312 0.97
Sequence Information
- Coding Sequence
- ATGTGCGATTTACGAACCAACAATGGAGAGTCCATGTTCGATGACATTGACATGGGACTTAAGTCTATACTAGACGAATCATTCCATCCATTTTTCCCGGGTAAGAAAACTCAATCAGTGGCCAACGTCCCAAAAAGAGTCAACCGCAAATCTTCAGGTAAAGCTTGTGGAGTGCCCAGAGATGGCAATACCGATAAAAAAGAAGAAACTGAGCTTTTGTGGACTAACGTCGTAGAATCTCAGTCAGCATTTTTGGGACCGAACCTATGGGACAACAAAACCATACCATACGACAATGACCTCAAGTATTGCGACCTCGACGAATTCCTGTCCGAAAACGGATTGCCAGTGGAAGGCGACCATCAGAACGGAACGACCGCGGGCAACGTCAATCCGGGCACCGTAGTGGCGGTCAACCACCAGGGTGGGCCCATCATGCCAGGCGCCAACAACCGCTTGTCGTCGCCGCCGCCACCGGCTTCCATACATCCGATACAACACTTGCAGACAAATGGTGTGGCGGGCGTGGGCGTCATACTGACCAAGCGCGAACCGTCTCCGTCGCCCAGCGAACCGCTCAGCCCGATCACCATAAACCCGGCATCACCAGCAGATTCAACATTGTCGTTCGCGTCGTCCAGCAGAGACTTCGACCCGAGAACAAGGCCGTTTTCCGACGAAGAATTGAAGCCGCAGCCAATGGTAAAGAAATCAAGGAAACAGTTTGTACCGGATGGGCTGAAAGATGAGAAATACTGGGCAAGACGTAGAAAAAACAACATGGCGGCAAAGCGATCGAGAGACGCGAGACGAATGAAAGAGAACCAAATTGCATTGAGAGCAGGGTTTTTAGAAAAAGAGAACATGGGCCTTCGACAAGAGATGGAACGTTTAAAGAAAGAAAATTTAGCACTCCGAGATCGTCTTTCAAAGTTCGAGATCTAA
- Protein Sequence
- MCDLRTNNGESMFDDIDMGLKSILDESFHPFFPGKKTQSVANVPKRVNRKSSGKACGVPRDGNTDKKEETELLWTNVVESQSAFLGPNLWDNKTIPYDNDLKYCDLDEFLSENGLPVEGDHQNGTTAGNVNPGTVVAVNHQGGPIMPGANNRLSSPPPPASIHPIQHLQTNGVAGVGVILTKREPSPSPSEPLSPITINPASPADSTLSFASSSRDFDPRTRPFSDEELKPQPMVKKSRKQFVPDGLKDEKYWARRRKNNMAAKRSRDARRMKENQIALRAGFLEKENMGLRQEMERLKKENLALRDRLSKFEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00940116;
- 90% Identity
- iTF_01499392;
- 80% Identity
- -