Rnym013502.1
Basic Information
- Insect
- Rhopalosiphum nymphaeae
- Gene Symbol
- Pias3
- Assembly
- GCA_036289425.1
- Location
- JAZAQC010000016.1:8361333-8364179[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-22 2.6e-19 69.2 1.8 3 49 324 370 322 371 0.95
Sequence Information
- Coding Sequence
- ATGGCGAAAtcgataaatcatttaattgCAGACATTGAATATATTCATCAATTGGTGTATGATTTAAGATTAAatgaattacaacaaatttTGGAAGCTGTTAAGCAGAACAAATCTGGTAGCAAACAATCTTTACGCAAGCGAGTTTTAAACTTGTTAACTGCTCCTACACCAAAAACAAAAACcttgaaacaaaaaattgtacaagTTTATAATGCTAGACCACAACAAAATCAACAACCACAACTACCACCGCAGCCACCGGTTGTACAACCgcaacattttttacaacgATTCTTACGACAACCTCGACTTCCGTCTCATAGTCAATCTTATGCATCACCAAGACTAAATCCTGTTCAACCTTTTGTTGAAACTCCAAATCCACCTATCCCACAACAAGAATTTGAAGACTTACCATTCTTTAAGACAATACAAACGTTATTAATGCCTATGTACTGCCAAACTAATATCGATTCTGCTAATTTTACTGggctattttatttaacagataatataagacattCTATTGTTAAATCATGGAATATTGCCAgacaagaatataaaattcaaataattttaagattggTACAAGTTGGACTTAATGAAAATGTTACTGAACGTTTACCTTACAATATTACAGTTTCTGTAAATGATCGTCAATGTAAGTTACCAACGTTAAACATTCCAACAAAAGCTGGTATCACACCATGGCGATGCAATGTTCCTATAGATATTACTCAGCAAACTGATTTAAGAAATTGTTTAcagaatacattaaaaattacatggtCGGAAGAACCACATGAATATTTAGCTGGTGTTTACGTTGCCCAAAAATTAACTTGGAATGATCTGCTAGTTGAACTTAAAAAAAGACCAGTACGTGCTTCTGATAAAACTAAAGAACTCATTAAAAAGTCTATGGAAAATGATGCTGATATGGGTGTAGATTCTATGTTTGCTACTGTTAAGGATCCATTAACAAAACTAAGAATGAAACTTCCTGCTCGAGGTGTAGACTGTATACATATGCAGTGTTTCGATGCAATACAATTCTTACAGATGAATGAGCAAAAGCAAACATGGACATGCCCAttatgtaagaaaaaaattaaatttgaaaacattgaagttgatgaattttttttaaatatgcttGAAAGTCCAAATTTAAGCGAAGAAtgtgaaaatgttattttattaaaagatgGTACATGGtctgaaagaaaaaataaagaattttcaaacaattttagaaCAAATGACTGTCGTcctacaaataatatagaagTGTTTACATTGTCAGATTCTGatgacgatgatgatgattTACCAAAATcaaaacgtttaaaatgtaatgcaCCAAAAGTTGAAGAATCTGTAATCAAATCTGAGCATATTGCAGAAATAGAAGATCTAACAAATCCTTCCGAAAGTGATCATGTATTAGACTTgagtcttaaaaataattcaacgcCATCAGCTTCAAGTAGTTCAAAGTATGAACCAACTATTACTTTAAATGACGATCCTGATCCTTCAACTTCTACCAATTCAAAGTATGAACCAGTTGTTATATTAAGTGATGAACCTGATTCATTGAATGACTCGTCctgtatgttaaataatttttaccttCCAAGTATTACAATCTCAGGGTCCAATAACTGTATAGCAAGTAATTCTGGAAGTAGTAGAAGTAATAGACGTCAAGAAAAAGATAAATCAAGGTCGGTTTTATGTGTTATAACATTAGATTGA
- Protein Sequence
- MAKSINHLIADIEYIHQLVYDLRLNELQQILEAVKQNKSGSKQSLRKRVLNLLTAPTPKTKTLKQKIVQVYNARPQQNQQPQLPPQPPVVQPQHFLQRFLRQPRLPSHSQSYASPRLNPVQPFVETPNPPIPQQEFEDLPFFKTIQTLLMPMYCQTNIDSANFTGLFYLTDNIRHSIVKSWNIARQEYKIQIILRLVQVGLNENVTERLPYNITVSVNDRQCKLPTLNIPTKAGITPWRCNVPIDITQQTDLRNCLQNTLKITWSEEPHEYLAGVYVAQKLTWNDLLVELKKRPVRASDKTKELIKKSMENDADMGVDSMFATVKDPLTKLRMKLPARGVDCIHMQCFDAIQFLQMNEQKQTWTCPLCKKKIKFENIEVDEFFLNMLESPNLSEECENVILLKDGTWSERKNKEFSNNFRTNDCRPTNNIEVFTLSDSDDDDDDLPKSKRLKCNAPKVEESVIKSEHIAEIEDLTNPSESDHVLDLSLKNNSTPSASSSSKYEPTITLNDDPDPSTSTNSKYEPVVILSDEPDSLNDSSCMLNNFYLPSITISGSNNCIASNSGSSRSNRRQEKDKSRSVLCVITLD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00136495; iTF_00134992; iTF_01329457; iTF_00135379; iTF_00135847; iTF_01306069; iTF_00973398; iTF_01304538;
- 90% Identity
- iTF_01329457;
- 80% Identity
- -