Rnym007693.2
Basic Information
- Insect
- Rhopalosiphum nymphaeae
- Gene Symbol
- PIAS1
- Assembly
- GCA_036289425.1
- Location
- JAZAQC010000008.1:4352704-4354220[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.34 8.5e+02 0.3 0.0 21 38 193 211 171 219 0.70 2 2 9.2e-23 2.3e-19 69.4 2.8 2 48 319 365 318 367 0.96
Sequence Information
- Coding Sequence
- ATGAATCATTACCCCAGTGAAAAAATTATGCTGTCTAGCTTCCTAGCTGTTGATTTGCAATTACTATTGGAAACGTTTGGTCTAAATAGCAGTGGATCAAGATCTGAACTACTTGATCGGGCAAATCGATTGATAATTTGTAAACCAAATATCCTTGACAATGCagcatttaaatcaaaaataattgaaatatttcaaaccaAACTGAATAGTAACTCGAAGCACCGTtttaatcaatcaaatcagGTTATAAATACGGGTCATTATTCTACCGTACAAAACAAGACGAATCAAATGTATCAATATTCTCGACgaaaaatacacattaatcCTCTTCAAAATCTAAATCATTACAAGTTTCAAAAGCTaccattttatgaaaatattgaagaaaTTATTAAGCTAACTCATCTAAATAGCTTGAATGATAAATGCACATTAGTTAACCATCCTACAGgTATGAAAGAACATGTATTTACATTTCTTATGTCTGTAGAtcaaattagtttaatatctttaaatcgTGATATTTCAAACACAAAACCAGAATATCCCTATCAGTACCAAATTCGACTATGTCAAATAGAATTAGGATGTTTTGAAGTGACAGATTATTTTCCCATTCAACTTAATGTTCGAGTTGGAGATACACCTATTCCATTGTCACCTATTGTTTCTAATAAGCCACCTAAATCAAGACGAAAAGCAAGTCCTATCAATTGCActcatgaattaaaattatgtccaTTTATTACAAACCTAATTAAAGTAAACTGGGTTCCCGATGGGAAAAATTATGgtattgcaataaatatagttaaaaaattaagtgcagataatttaataaaaaaacttcaaGATAAACAAGCAAGAAGTTCAGAAGAtactaaaaatgaaattattaaaaaattaactgttGTTGATCCAGATTTGGCCTTTACATCTAATCAATTGTCTTTGTTATGCCCATTGAGTAAAAATAGAATGAAGTTACCTGCAAAATCCATTCATTGtgatcatataatatgttttgatgCAGATGCCTTTATTAGAatgaacgaaaaaaaatcaacatggCTTTGTCCAATTTGTAATGTATCTTGTATGTatgatgatataaaaatagaaaattactttttagaaATTGTGACAAGCTCTAGACTTGAAGACGATGacaacaacattttaattaatgctgATGGATCATGggaaaaagatttaaaaataaataccaataatacaCTTGTCactaaaacaaaatctattgATTTTGTGAATTTGGATAGCGAAGATGAAAAATCTATTAAGCCAAAAAAAGAACCCAATTCAAGTTACTCAAAGTATCAGAAATCTAAAAACTTAGAATCACTTTATGTTGATTTGACAATAAACGAGGATAAAGAACtggaaaataatgttaaactaGAAGATGATGCTCAAGCATCCTAG
- Protein Sequence
- MNHYPSEKIMLSSFLAVDLQLLLETFGLNSSGSRSELLDRANRLIICKPNILDNAAFKSKIIEIFQTKLNSNSKHRFNQSNQVINTGHYSTVQNKTNQMYQYSRRKIHINPLQNLNHYKFQKLPFYENIEEIIKLTHLNSLNDKCTLVNHPTGMKEHVFTFLMSVDQISLISLNRDISNTKPEYPYQYQIRLCQIELGCFEVTDYFPIQLNVRVGDTPIPLSPIVSNKPPKSRRKASPINCTHELKLCPFITNLIKVNWVPDGKNYGIAINIVKKLSADNLIKKLQDKQARSSEDTKNEIIKKLTVVDPDLAFTSNQLSLLCPLSKNRMKLPAKSIHCDHIICFDADAFIRMNEKKSTWLCPICNVSCMYDDIKIENYFLEIVTSSRLEDDDNNILINADGSWEKDLKINTNNTLVTKTKSIDFVNLDSEDEKSIKPKKEPNSSYSKYQKSKNLESLYVDLTINEDKELENNVKLEDDAQAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -