Rnym006534.1
Basic Information
- Insect
- Rhopalosiphum nymphaeae
- Gene Symbol
- Ada2b
- Assembly
- GCA_036289425.1
- Location
- JAZAQC010000007.1:10403857-10415925[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.64 6.7e+02 1.0 0.0 21 44 117 140 107 142 0.85 2 4 0.0055 5.8 7.6 0.0 10 31 232 254 230 259 0.91 3 4 0.019 20 5.8 0.4 21 37 484 500 447 508 0.65 4 4 5.1e-07 0.00054 20.5 0.0 1 40 561 616 561 620 0.82
Sequence Information
- Coding Sequence
- ATGTCAACTTGCATACCTGATGATTCAAATTCAATTAATGgtATTCCTGTATCACAagtgaattatttttgtacttattGTCAAGATGAAATCTCAAGTTTTCCATGTCAATCAAATACTGCTTATAACtcaatgattatttttgtcCGTTGTGCAATTTgtgatgatttttttctttgtttaatgtgtttttccAGTGGAGCTGAAATTggctttcataaaaattatcatgattataaattagttacaatttttaaatcaagtaCGTTTTCAACAAAACTTTTGGATGCATTAGAAGAATGGATTTCTGAagacaatgaaaaatatttagaatcaAAAAAACTCGTGGATAGCTGGGAAGATGTTGCTAGTATAGTTGGATCTGAAAATCCTGAagacgtgaaaaaagaatattacaaTACTTTTGTTAACGGATATTTTggtcaaaatgttattaaattagttaataaacatataggATATCCTCAAGTTGTAACATTAGATCAAGCTATAGCAATGGGTTGTTTAGAAAATTGTCCTATTTATTTTCCAACACGTAAAtaccTAAAAATACCAGCAGATAAAGAAAGAAAAGAAGATTATGAAATCATagaggaaaataataaattgaatcgATATAATAATCAGgatTTGATATTgcaaaataagaatatattagatagttaccaagtacaattattattacaatgtgtTGGAGAATTCGGTTATGGAAATTGGGAAGATAtgtgtaaacaatataataaaattatacacatgGAATATCCAAGAGGAAAACGCACATATTTATCAGCAAtaaaaattaaagaaGAATATGTACTCCGTTTTATTCAAAATCCTATTTTGCGTGGAACTTGGTTACCGTCCTCAATTACAAGACCTCAAATACCTGATCGAACAAAACGTATTGAAGGACCTAGTTGTGACTATgaacatgttttaaaaaagcAACTTCCTATTGAAgatttggatatttttttttatccaccCCCACTAGATGATGTAGATGAATACCAATGTAAAATTGAAGAGCCAAAAATTGAAGCAAATGAATCAGCTGAATCCAAAAGAAAGTGTTTAGTTTGTACATACTGTCAAGATGAATTTGAAGTTATAGGTTATCGGACAGACAGccataaattttcaaattataaattaattactgtaTATACTTGTTGCTCAAATAAACAGACATGtgaaaatttttatctatGTCTAGTGTGTTTTGCGAGTGGAGCTGAAATtggaaaacataaaaatagtcATGGTTATACTTTGATAACTGAAGTAAAAacTTATTCTAGTGAAGCTTATTTTCAAGGGTCCAATTGGACTGCTATAGAAGAATTAGCATTTTTATATGCTTTAGAAGAATGGTTATGTGAGCACTCTGATAAATACATAGACCCATTAAATtctgaaaattgtattacagatTGGGATTCTGTTGCTCAACATATTAGATCAAAAACAGTTAATGaagcAAAAacagaatttgaaaatttaattttaaatccaaGAATTTggcaactttttaaaatatatgcccATGTTGAACCTTTAATTACATATGAAGATGCAGTTGAAATGGGTTGTTTCAAAACTTCTAATAAAACTTCAAgtataataacagATATAGGAGAAGAAACaatagaaaatgaaaaaaatacgtgGAATAAATCGGATTTAGagttattattagattatacaGCTATATATGGTTATGGTAATTGGGAAAAAATTTCAGAAgagttcaataaaattaatttttatgaacattttggaaaagttaattattttataacaagaacTCCTGAAGaaataaaaaaggAATATTTACTTCGATACTTTGATGATCCAATTAGACGAAGAACTTGGAAACCACCATCAAATAAGCCAATAATTTTAGATCGTACATGGTCTTTTAAACAACCTGTTGAAATGACGTATCCTGTAgtggattataatttattcgcttatactagttataataatattgctgatgaatttgaatatcctTATATGAATATAGCTGAATCTTCTTTAGACAATGTGGAAGATTTtgaaactaatataaaatattttcattcaaaacattccatggaaaaatataatggCACTACCAAATATATGATGGatactaaaaatacttttAAATCAAAAGATCCATTTACAAGTACCATgctcaatattaaaaaagTAAAAGCATTAATTTCTCTAGAACGGTATAATGATGTTTTATGGGATCGAAGAATAGCTAAAAAATGTGTTCACAACTATAgattaattgaacattttgcaatgtacaaaaataaagaattaccaaaaataaaaccattttcTGAACAAACATTTGTGGAGCGTTTAGTGAAAATGTCAAGATTCATGAATATTGATGTTCATAGGGCCTTGATTGAAGGATTAAAGAACGAAAAACTCTTAAGACTGcgatttaatgaattaaaatattatagaaaaataggtataacaaAACTATCtgatatcaataaattcaataaattacaaaaacataGACGTCAAAAGaaactaTCAACACTTCTTCATACTGAAGATAAGTCGGatcataattttcaaacatttaatgAAACTCTAAAACCATCAGGATCTAATGAAAATGgctatgttcaaaatacttaa
- Protein Sequence
- MSTCIPDDSNSINGIPVSQVNYFCTYCQDEISSFPCQSNTAYNSMIIFVRCAICDDFFLCLMCFSSGAEIGFHKNYHDYKLVTIFKSSTFSTKLLDALEEWISEDNEKYLESKKLVDSWEDVASIVGSENPEDVKKEYYNTFVNGYFGQNVIKLVNKHIGYPQVVTLDQAIAMGCLENCPIYFPTRKYLKIPADKERKEDYEIIEENNKLNRYNNQDLILQNKNILDSYQVQLLLQCVGEFGYGNWEDMCKQYNKIIHMEYPRGKRTYLSAIKIKEEYVLRFIQNPILRGTWLPSSITRPQIPDRTKRIEGPSCDYEHVLKKQLPIEDLDIFFYPPPLDDVDEYQCKIEEPKIEANESAESKRKCLVCTYCQDEFEVIGYRTDSHKFSNYKLITVYTCCSNKQTCENFYLCLVCFASGAEIGKHKNSHGYTLITEVKTYSSEAYFQGSNWTAIEELAFLYALEEWLCEHSDKYIDPLNSENCITDWDSVAQHIRSKTVNEAKTEFENLILNPRIWQLFKIYAHVEPLITYEDAVEMGCFKTSNKTSSIITDIGEETIENEKNTWNKSDLELLLDYTAIYGYGNWEKISEEFNKINFYEHFGKVNYFITRTPEEIKKEYLLRYFDDPIRRRTWKPPSNKPIILDRTWSFKQPVEMTYPVVDYNLFAYTSYNNIADEFEYPYMNIAESSLDNVEDFETNIKYFHSKHSMEKYNGTTKYMMDTKNTFKSKDPFTSTMLNIKKVKALISLERYNDVLWDRRIAKKCVHNYRLIEHFAMYKNKELPKIKPFSEQTFVERLVKMSRFMNIDVHRALIEGLKNEKLLRLRFNELKYYRKIGITKLSDINKFNKLQKHRRQKKLSTLLHTEDKSDHNFQTFNETLKPSGSNENGYVQNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01328567;
- 90% Identity
- iTF_01305487; iTF_01304112; iTF_00972982; iTF_01328567;
- 80% Identity
- -