Rnym005677.1
Basic Information
- Insect
- Rhopalosiphum nymphaeae
- Gene Symbol
- NCOR1
- Assembly
- GCA_036289425.1
- Location
- JAZAQC010000006.1:45874219-45888383[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-07 0.00045 20.8 0.0 4 43 489 528 487 530 0.98 2 2 8.4e-14 8.9e-11 42.2 0.3 4 44 833 874 831 876 0.96
Sequence Information
- Coding Sequence
- ATGGAAGCTGTACAACAAACAGTTATACATCTGGATCGTGCTGCCATGCCTTCACAAGCTCAAATGGCTTATTCTCAAAGAAATCCTCAAATTCATGGaAGAAATGTTAACCATGGTGTAGTTCAAGTACCAGGAGAAAATGGGCCATATAAGCCATCTGCTGGTACTGGCCaagttcataataattttgttgggTACCCGGCTAATATACGATATGTTTCTCAACCTGTATACATGTCATCTACAACCACAGCATCAAATGTATATAGAGATGCGCCTTTTCATTCTAGAGCATTAAATatatctgATAGAGGAGTTACAATAGGTGTTCCTTTTGAATTAGCTAGAAGTGATATGATGCCTACTGTAGCTAGGCAAAATCGTATTTCTTTGCTGTCTGCAACAAGCGATTATTATCAACGAAGTCGCTTGCAaatggaACATTATCGAGATGAATCATTAAATCACAATTCTCATAATACGGTTTCTATGAACTTTATGAGAGAAAGACCAGATCATGGTCCTCCACCTCCTatgaaaaaaccaaaattactTCATCCCATTTCACCTCAACCACCtcttaaaattgatatatcaGATCCCCCATCCACAAGTGCATACAACCCTCAAGTAGAAGCTATTTCACCAACTATTGATGAACCCATGCCAGAATATAAGAAAGTTAATGACATTactccaaaattaaataaaattgaaagtgatataaataatattactcaaGAAATTGAAGACTTGATCAAGTTAAAAgAAAATTATGAACAAAAAGAATTGAATTCAGAAGTTACTAAAATAGAACCCGAAGAGGATACATTAAAAGAATGTGAAGAAGAAGATCCTACAAACTTTTTGACTCCAGTTCAACGAATTTATGCATCAAACaggaaaaaagcATTGGAATCAAGAATGAGCCTAGAAAAATTTGCCAACAAAACTGATCTTcCTTTATATAATCAACCATCAGATGCTGATATTTATCACGAAAACAGAAgaaaatattcattatttaagtcgACATTATTGGAACATCTAAGGAAAAAGAAAATGGAACAATTGCAAAAGAAAACCGAAATTACTGAAACATACTCTAAACTTTATAAAGATTGGATTCGTAGAGTGGAAAAAATTGAAAGCTCACAAAAACGAAAAGCTAAGGAAGCAAAACATAgagaattatttgaaaaagtatTCCCAGAGTTAAGAAAAGCACGTGAAGATAAAGAAAGGTTTAATAGAGTTGGCGCTCGTATAAAAAGTGAAGCAGATTTAGAAGAGATCATGGATGGTTTACAAGAACAAgagATGGAAGACAAAAAAATGAGGTCTTACGCAGTTATACCACCACTTATGTTAGACCCACATGAACGACATTTAACTTATTTGAACAACAATGGACTTGTATTGGACTATAAAACAGAGTATAATGAGAGGAAGTATGTCAATATTTGGACACAACAAGAAAAAGATGTGTTTAAAGATCGTTTTATTGCTCATCCTAAGAATTTTGGTGCAATAGCATCTTATCTTGATAAAAAATGTCCTTCTGATTgcgttcaatattattatttaagcaaGCCTAAAGAAGAGTACAAAAGATTGTTACgcAAAGCTAAATGGCAAGCAAGACGTCGTACTGCTCAAAATCGAACACCTGCTAATAGTTCATTGAATtcgttagatattttaaattctacttCAATTGGTGTTACAACTAGACTCCAACGAGAGCGTCAAGGTAGTGAAGCAGCATCATCAAATTTAGCACAAGTTTCAGCAGCTCAAAATGCAATACCTGAAAATGAAGAAACTCCGGTATCCGTAGAAGTTGAAGTTGCTACTGAACAAGGTGCTAATAATGAAACTGAAAATTCACTAACCAATAAAGACCAAAGTAATGACTctgttaaaaatttgataaagcCATCTGTTACGTCACACACaagTGAATTAAAGCCTGAATCCAAAAAGAAAGAAAGACGAAaagatgataaattaaaaggaGAAAATACAAGTACGACTGATGAAGAACTGATGGATTCTCAACATGAAACTGGGTCAAAAGGAGATGTACCTAAAGGTATGTGTGCTGTTTGTAAAGCAGAAAATGTGGCATGTCCCAGGACTCTTAATCCATCAGATGCAGCACAATATGGTGTAAAGCCAGAAGATATTATTCCTGGAGCTCGGGTTTGCAATACTTGCCGTTGTAAAGTGGTTCGATCCCAAAATCGTCGTGTAATATATTGTCCGTTAGCATCCTGCCCCACTGTTCAATCTAATAATAGAAGACCTGTAAAAAGATTGCGTCCATTACCTGCTAAATGGAATACTGCTCAAGATATCATTGCTTCAGAATTTCaAATTGGtccaacaacaacaaaatgtTGTTCAGCTTGTTTTAATCGTATCCAAAGACGATTAATGGCACTTGGTGTAGTAGGAACATCAAACAATATTAGTACTGATACTTTAGATGGCTGGACTGATGAAGAGACTAATGCATTAAAGAAAGGAATTCGTGAACATGGCACTCGTTGGAGTGAAATAAGCAAATTAGTTGGACAAAATAAAAGCCACTATCAGTgtaaagaattttattttagcttcAGAAAAAAGTTAGGCTTAGATCTTTTGGTACAGGAATATAAAAagACAAACGGAAGTGAACAAAAGCCTGCTCTAACAGATGAGGAAGAGTCTGGGTCAAGTACTTCTAGCTGTGATGAGACTAACCTTGTATTGTGTGACAGTGATACACAAAGTGCACCTTCACCAACAAATACTTTACCACAATTATCTCCTCCGCATGATACAACTAGCCCACCACAAGCTAAATTGACAGCTAAAGAGTCACGAGATAATGAGAATTCTAATCGCTCCACGGTTGTCAAAGAAGATTATGATAGTTCAGCTACTGAAACTGCAGATGAAGGAATTGGAGGTACTGCTGAAAACGAGTCTAATGTATTGCAACATTCCAATAACGAAtcggaaaaaaaagaaaagattgTAACTGATTTAAGTGTGTCAGATATTTTATCTGATgtaattgaaaaacaatttacaaaagAACATTCGACCCGAGAGaaGGAGAATGGTTCTATGCCTACCATATCATCTATACTTTTGGATCCTGAATATCCAATTAAAGATAGAAATACAGGATCTAGCaataatgaaaacaaacaACAGTCAATGGCTACCATATCAGTGGTTCCAACACCACCTCGAGAACTTCACAACAAAGATGGTTTAGTAGTTGTTCAAGTACAATCTTCTAAAATTTCTGAAGTTAGAGTTCCTGAAGGTGTAACTCTTGATTTAAGTATCAAAAGACCCAGAGAAGGAGATTCTTATTCTGATCCTCTGCCAATTAAACATGCacaaccaccaccaccacctgGTGCAATGTATAGAACTCCTCCCACACAAATTCAtgaaacaaatacattttattctccacagTATGCTGAATTGGGACGAAGTGGCAAACAAGGTGAAATATATTGGACAAAAATATCACCAGCAAGTAATCATGTCATGGTTCATCCATCACAGTCTGTTCCTCATGTAACTGTTAAACAAACATCGCACATAAAATTACCTAATAAGgtaacATCACCTCAGTTATCTGTAGCAAATGTTGTTTCATCAAAGTTGTCTcctaatatattgaataataactcAAAAGCTACTGGATCCATTATGCATGGAACTCCTGTTTCGGCTGCAACTTTATACATGCCACCGCAATCTAACCGTTATTCTCAGCCATCACAAGCTCCAGGTGGTTCTATTACTCAAGattattatcaaaaacgcAATCCACAACCTCAATATCAATCAAGACAGCCTCATTATAGTGAGCAACggcaaattattatgaatgattATATTACTTCACAGCAAATGCATTCTAATGTTGCTGCTCAATTTCCTCGAGTTCAAAAACCTCCAGTTACTAGCCCTATGTACTATCAACCAACTCGCCAAGGTGTAATACAACGCCATAATACTGCTCCTAAAGCAACATCTCCACAAACTTATCCTCCAGGACATGAAGCATTAGGATCTTTAGTAGATGTTGCAATAAGACAGCCCAGCTTACCTGTACCTTTGAATCATTCCGAAGATAGACACAGAGAACAGGATCGTTATGTAAGAGGGTCTCCTGCACCAAAACCACATATGTACAGAGAACAACAAAGACATGAGCATATGCAAAGAGAACGTGAAATAGCTGTGCAAAGAGAGCGAGAAATGCAGGCAGTTGCACAAATTAGAGAACAGCAACAAAGGGATCAGTATATTAGGGATAAACAAATGATGCATCATCGGCTTACGCCTGAACAACATTCAAGGATGGTAGCTGCTTCATTTCAAcatcaacaacaacaacaacaacaacaacagcagcagcagcagcagcgaCAACAAGAACAACCAAGAGTAATGCAAATACCTTCTACTGTTTCTTCATTTCAACAATCTAGGTCAAATACTCCAGTATCTAGGCATCAAGAACCACCATCCAATatacaaaatagagATAATGCTGGTAGTGGAAGAGCTTCAAGACAAGGTACAGAACCTCATGCATTAACTGCAGCTAATTTAATTGATGCCATTATCACACATCAAATAAATCAGAGTAATGACGGAACTGTACATCCTCCTAATGCTGCTCCAGTTACCAATCAGTCCCATGTTCAACAACAACGAGCTGGTGATAAGTTATTTCAATCATTCCCAGAAgcaaatgaaaaacaaaatttaaaaccacGAGCTAGTCCGGAAATGAGTCGTTCCGGAGAATCATATCCACCAGAACACCCTTTTAAAGAATatccttttaataatatgttagctGCAGGCTTTGAACCTCACACTTGGAAGCTTCGCCGTGCTTTACAACAGAAAGAATTTGAGCAACAAATGAAAGATGACAACAATCGAGTTCGTTTTTATCCAACTCAAGCCGATATACCATTATCACCTTTAGACTATGTTAAAAATCGGATTGTTGAAGTAATGCGCACATCTGACGATgataacaaaaatgaacaggcTTACACTTATCCATTTTCTGCTGCAATCAATATGTCTACATCAgctacacaaaaaaataatgaatcatcTGATCCaaatggtggtggtggtggatCTATGTTAACAGCCCAATATGAGCCGATGTCTGATGAGGATTAG
- Protein Sequence
- MEAVQQTVIHLDRAAMPSQAQMAYSQRNPQIHGRNVNHGVVQVPGENGPYKPSAGTGQVHNNFVGYPANIRYVSQPVYMSSTTTASNVYRDAPFHSRALNISDRGVTIGVPFELARSDMMPTVARQNRISLLSATSDYYQRSRLQMEHYRDESLNHNSHNTVSMNFMRERPDHGPPPPMKKPKLLHPISPQPPLKIDISDPPSTSAYNPQVEAISPTIDEPMPEYKKVNDITPKLNKIESDINNITQEIEDLIKLKENYEQKELNSEVTKIEPEEDTLKECEEEDPTNFLTPVQRIYASNRKKALESRMSLEKFANKTDLPLYNQPSDADIYHENRRKYSLFKSTLLEHLRKKKMEQLQKKTEITETYSKLYKDWIRRVEKIESSQKRKAKEAKHRELFEKVFPELRKAREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPLMLDPHERHLTYLNNNGLVLDYKTEYNERKYVNIWTQQEKDVFKDRFIAHPKNFGAIASYLDKKCPSDCVQYYYLSKPKEEYKRLLRKAKWQARRRTAQNRTPANSSLNSLDILNSTSIGVTTRLQRERQGSEAASSNLAQVSAAQNAIPENEETPVSVEVEVATEQGANNETENSLTNKDQSNDSVKNLIKPSVTSHTSELKPESKKKERRKDDKLKGENTSTTDEELMDSQHETGSKGDVPKGMCAVCKAENVACPRTLNPSDAAQYGVKPEDIIPGARVCNTCRCKVVRSQNRRVIYCPLASCPTVQSNNRRPVKRLRPLPAKWNTAQDIIASEFQIGPTTTKCCSACFNRIQRRLMALGVVGTSNNISTDTLDGWTDEETNALKKGIREHGTRWSEISKLVGQNKSHYQCKEFYFSFRKKLGLDLLVQEYKKTNGSEQKPALTDEEESGSSTSSCDETNLVLCDSDTQSAPSPTNTLPQLSPPHDTTSPPQAKLTAKESRDNENSNRSTVVKEDYDSSATETADEGIGGTAENESNVLQHSNNESEKKEKIVTDLSVSDILSDVIEKQFTKEHSTREKENGSMPTISSILLDPEYPIKDRNTGSSNNENKQQSMATISVVPTPPRELHNKDGLVVVQVQSSKISEVRVPEGVTLDLSIKRPREGDSYSDPLPIKHAQPPPPPGAMYRTPPTQIHETNTFYSPQYAELGRSGKQGEIYWTKISPASNHVMVHPSQSVPHVTVKQTSHIKLPNKVTSPQLSVANVVSSKLSPNILNNNSKATGSIMHGTPVSAATLYMPPQSNRYSQPSQAPGGSITQDYYQKRNPQPQYQSRQPHYSEQRQIIMNDYITSQQMHSNVAAQFPRVQKPPVTSPMYYQPTRQGVIQRHNTAPKATSPQTYPPGHEALGSLVDVAIRQPSLPVPLNHSEDRHREQDRYVRGSPAPKPHMYREQQRHEHMQREREIAVQREREMQAVAQIREQQQRDQYIRDKQMMHHRLTPEQHSRMVAASFQHQQQQQQQQQQQQQQRQQEQPRVMQIPSTVSSFQQSRSNTPVSRHQEPPSNIQNRDNAGSGRASRQGTEPHALTAANLIDAIITHQINQSNDGTVHPPNAAPVTNQSHVQQQRAGDKLFQSFPEANEKQNLKPRASPEMSRSGESYPPEHPFKEYPFNNMLAAGFEPHTWKLRRALQQKEFEQQMKDDNNRVRFYPTQADIPLSPLDYVKNRIVEVMRTSDDDNKNEQAYTYPFSAAINMSTSATQKNNESSDPNGGGGGSMLTAQYEPMSDED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00018953;
- 90% Identity
- iTF_01328563;
- 80% Identity
- -