Rnym006271.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Rhopalosiphum nymphaeae
Gene Symbol
ARID4A
Assembly
GCA_036289425.1
Location
JAZAQC010000007.1:6199916-6224596[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-24 7.3e-21 74.9 0.1 1 89 145 228 145 228 0.93

Sequence Information

Coding Sequence
atGGTACAATTCAGCAAATTTCAGGAAAATAAAGAAGAAAACGCTTTAGCAACTGAGGAAAAAGATATTGGAAAAGTAGTTTGTGTTATAActagtacaaaaaataaatcaaaagataATTGGTTTCCTGGTTTGATAGTTGCACCCACTTCACAATTCTCGGTCAGaactaattttatagaaaaccACCTAGTTCGTTCATTTAAGGATGGAAAATAccACACAGtactaaaaaaagaaataactgAATTTACAAAAGAAGTTGGTGCTAGAGTGGAAAATCCTACGCTTAAAACtgctgTTAAAAAAGCCAATTTTTATCTTGACAATGATGAACTTCCACCACACTGGGATCgagattatttatttggtGTTGACACAATTTGTACTACTACTTATGATGGCAATaaTACTGATGAAGAATCAATTGAAGAAAAAGATCATTTTGTCGCacagttaattaaattcatggaTGATCGAGGAACTCCTCTTAATCAAGCTCCAATGATTGATGAAAAGGATgttgatttatataaactatttaaggttGTCAATAACTGTGGAGGATATAACAAAGTTGATAAAGATAATCAATGGCTATTTGTATCAATTAAAGCTGGCCACGAACAACAATCATCTTTATCTGTTAAAAATTTCTATCAAaaATTTTTACATGGTTTTGAGAATTTTTATCGAAAATTAGGCTGTACAATGTTAAGTCATCCAAGAAAAACCACTGAAAAAAAGAAGAATGTtaggaagaaaaaaaatgataaagtgaagacttcaaataataatgcaacagttcttaataTCAAAGtagaaacatttaataaaaatacattagtgGTTGTTGGAGATCAtttattagtgtattataatcaaaatcaatTGTATGAAGCAAAAgtTCTTAAAATGCGTAATATTGATGGAGTGatgaaatattacatacattatacaggATGGAATTTACGTTATGATGAGTGGATTGATATATTAAGAATTGGATTCAAAATCATAGGTCTTGTACAAGGACCAAATAGTCATAATAACATAGATTCATCTAAAATTAATCCTACAGAAAACACTGAAAAAATAAGAACTCCTAGGAAGAAAAAATATGACGAAGAAAAGATGTCAAACAACAGTACTCTAACACTTATAAATATAAAAGATGAACCATATGATGATGAAGATGACATATTAACAATTGTTGAAGATAATTCAGCAGTTAACAATAGTGATAATCAAGCCATAACTGATAATACAAAAcAAACAAATTGGGACCAAGAAAAAATTCTATCAACAACTAGTAGAACTAGACGATCAGTTGTTACTCCGATCAAATCATATTCACTAAGAACCAAAACACCTTATAGTAGTACTCGGCCTAGAAGAACATGTACTTTGACTAAATCTTATTTTGataATTCCGATTCAGAAATAGAATATACAGTAAAACCCGTGGAATCATTTAAGCAATAtagtaagaaaaaaacaatcaaaactattaaatcagATGTCATAAGAGCAGAGCCTTTAGATACtaataatcagaaaaaaaatatgtgtttaaaaacatacccaaataaaaaagaaaaatcatcTGTGTTTAAAACTCATGATAATACATCTGAAGAAATTGAGATTTGTAAACAAGTTATTCTAAAACCGTCAAttgatttgaattttgtgattGCATCACAaagttatgatataaaatccAATGCTGATAATGAAGGTGAAGACGTACAGAATGAaagtaaaattgataatagtgCTATAATTGAaccaaacatttttactaagcATTATATATCACCTAATGAAAAAGCtagaaataatttagaaaagcGGTCTGAGTTCTCAAAAAATCAGAACAAAGAAATCGAAATTAATGGTAAACAATTAACAATGACAACAAAATCAGAAATTTTTAACACCACCAATTACTCATTGTCTTCTGGAGTTGAAGAACAAAatgaattagaaaaaataactaaagttATCTCTTCTCCTTTAGATGATACATTTGACAAGACTGGCCCTGATTTTTATCTAAACAAAATAAGATCAGATATGAAAGAACCTATGCcaatttcaacaaataataataataatgtcattCAAGACACTAACATATTGGATCAACAATTAGAAATTAAAGTGTTAAAAAGTAATGAACTAATTATAGATGATGTTTATGAATTTGAAGAATTTAAATCATgtagttttgatattatttcttCTGACATCGATTCCTcaaaattatcaaacttaGAGAAACTTGATGAGCAACCTAGAATGATTGATTCTTCAGCACAATTAGAAGTAGTTGAAAACAATAGCTCTATAATACCATTTGTTCCTATTATCTACAACACAAATTCATTTGAGATGAAAGttaatgagaaattgaacaatCCAAATGAAATGGATGATTCAATTACTCATAACAAATCTGATGTATCTgatatcaaaaatcaaattttagatttatctataaaaccATTTGAATCATTGCCCaataacatttgtatttttccAAGTGAGTTTAatgattatgttattaaagaaGAGGATGTtgacgatgatgatgatgatgatgacgaATCAAGATTGGTAATAGTAGAGGAACCTGATTATCATAGTGATGAAAGCATACAAATACAATCCTTACCACCAGTACCATCTAGTATACCTCTTAATAACACTTCACTAATAGATACAGATGATgaaagtaatatattgtatgacgaaagtatacaaaatgttcttttttctagttttaaaatgtctCCACACTCTAAAAGTTATGATAATGAAGTTGAGAATGTCAATAAATCTATGGTGCTACCAGCATTACAATTTAGAGAAAAAATAGTAGATGCAGATTATCTCAATAATGCTTTAGTTATAGAGAATAATCATTATgtttcagaatatgatattcATAGGCCTAGTACTAGTAAAGGTTTATTTGATTCAACAAGTCAACCAAGTATAAGCAAAGATACTTTCTATGAAACTAATATTAGTAATGATgcaaaaaatagttttgttgTAGCTGAACAAActgttaataatagtaattttgataCAAATGTTCCTtacaaaaAATCTGATGTAAAcaacatactattatatgaaGAAACCAGACCAAATACTTCAACTAGTATGCCAACAGAGCAAGAAGAAACAATCAAGATATTtggaaaattcaataataatgaaatagaaGCTATTTTAGGTATGTGTGCTATGTCTCAATCTTGTCATATGCCAATGGTTGTTATGGCAAATgctactgaaaaaaaaacgaaagaaGATACTAATATTCATCAAaagtaa
Protein Sequence
MVQFSKFQENKEENALATEEKDIGKVVCVITSTKNKSKDNWFPGLIVAPTSQFSVRTNFIENHLVRSFKDGKYHTVLKKEITEFTKEVGARVENPTLKTAVKKANFYLDNDELPPHWDRDYLFGVDTICTTTYDGNNTDEESIEEKDHFVAQLIKFMDDRGTPLNQAPMIDEKDVDLYKLFKVVNNCGGYNKVDKDNQWLFVSIKAGHEQQSSLSVKNFYQKFLHGFENFYRKLGCTMLSHPRKTTEKKKNVRKKKNDKVKTSNNNATVLNIKVETFNKNTLVVVGDHLLVYYNQNQLYEAKVLKMRNIDGVMKYYIHYTGWNLRYDEWIDILRIGFKIIGLVQGPNSHNNIDSSKINPTENTEKIRTPRKKKYDEEKMSNNSTLTLINIKDEPYDDEDDILTIVEDNSAVNNSDNQAITDNTKQTNWDQEKILSTTSRTRRSVVTPIKSYSLRTKTPYSSTRPRRTCTLTKSYFDNSDSEIEYTVKPVESFKQYSKKKTIKTIKSDVIRAEPLDTNNQKKNMCLKTYPNKKEKSSVFKTHDNTSEEIEICKQVILKPSIDLNFVIASQSYDIKSNADNEGEDVQNESKIDNSAIIEPNIFTKHYISPNEKARNNLEKRSEFSKNQNKEIEINGKQLTMTTKSEIFNTTNYSLSSGVEEQNELEKITKVISSPLDDTFDKTGPDFYLNKIRSDMKEPMPISTNNNNNVIQDTNILDQQLEIKVLKSNELIIDDVYEFEEFKSCSFDIISSDIDSSKLSNLEKLDEQPRMIDSSAQLEVVENNSSIIPFVPIIYNTNSFEMKVNEKLNNPNEMDDSITHNKSDVSDIKNQILDLSIKPFESLPNNICIFPSEFNDYVIKEEDVDDDDDDDDESRLVIVEEPDYHSDESIQIQSLPPVPSSIPLNNTSLIDTDDESNILYDESIQNVLFSSFKMSPHSKSYDNEVENVNKSMVLPALQFREKIVDADYLNNALVIENNHYVSEYDIHRPSTSKGLFDSTSQPSISKDTFYETNISNDAKNSFVVAEQTVNNSNFDTNVPYKKSDVNNILLYEETRPNTSTSMPTEQEETIKIFGKFNNNEIEAILGMCAMSQSCHMPMVVMANATEKKTKEDTNIHQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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