Rnym015302.1
Basic Information
- Insect
- Rhopalosiphum nymphaeae
- Gene Symbol
- Nfil3
- Assembly
- GCA_036289425.1
- Location
- JAZAQC010000019.1:916745-919132[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-13 1.4e-10 41.5 1.2 1 52 137 188 137 195 0.92 2 2 0.00049 0.48 11.0 0.0 38 63 594 619 588 621 0.86
Sequence Information
- Coding Sequence
- ATGGTAGCGGACACGGCTAGCAATTATCATCATCAACAGAAAACTCAGCCACAACAGCCACAGCAACCAAAccaacagcaacaacaacagcaacagcaccACCATCAGCAACAACAGCAGAAACTCCAccagcagcagcaacagcaactTCACCAAATCCATCTGCAACGCCAACAActacagcaacagcagcagcaaaACAGTGGCGGAGCCATGCCGCAATATTGTAGTGACATGGAACAGTCGGGTGGTCCAGGAAGCATGAGGTACGACGATTCGGTATCACCCGGACCAGAATCACCAGGCCCTGGTGAACCATACCCACCTGGGTTCGACCTAACAGCACACCTGCAGCACAAGGAGTTCTTTGCGCAGCGTAAGCAGCGTGAATTCATCCCGGATAACAAGAAGGATGAAAGTTACTGGGACCGAAGGCGACGAAACAACGAAGCGGCCAAGCGGTCCCGCGAAAAGAGGCGATTCAACGACATGATCCTCGAACAGCGGGTAGTCGAGCTGAGCAAGGAGAATCATGTGCTCAAGGCTCAACTCTCTGCCATCAAGGACAAGTTCGGTATCAGTGGCGAGGCCGTGGTCAGCGTTGAACAGGTTATGGCTTCTCTGCCGACAAACGAACAAGTGTTGAGCATCACTAAACGCCCGAAACTGTCcacgtcgtcgtcgtcctCGTCGGTGGGTTACTCTCAGAACGGGTCAGGTCCCATACCAACGTCAGTCATCCACCAACCCGTCCAGTCAACCACGCCCAAAATGAACGGCTCGTACTACGGCGGCGCACAGTCCGACTGCGGCAGTCCTGTCGACCAACACCAACTtcaacagcaacaacaacagcaacaacagcaacagcagcagggCGACCGTTCGAACGGCGTCAACGGTTTGCCGATGTCCGTGGCCGCCGCAGCCGTGGCCGCCGCGGCCCAAGCCGGGTACCCGCCGTACCCGTTCGCGCCCGTCCTGCCACCACTGCAGCCGCCGTCGTTCGAAGCGGCCGCTAACAGCGTACTGAACCTCAGCCGCCGGCCGCCGTCTCCGTACGAGCTGAGCAGCGGAAGCGGCGATGACACTTCGTCGTCTTGCGTGCCCATATCTCTGGCGTTCGTGGCCGCGGCCGCAGCCGCGGCGGCTGGCGGAGTGGTCGGCCCAAACGGCACGTTGGTCGGAAACAACAACAACGGCAACAACAACAATCACCACCATCAGCACCGGCACCGGCACCACTTCAACGGCAACGGCATGATGGCCATGATGGCCAACGGCGGCGGAGGCGTACCGATCGCGGTGCTCAGCGGCAACAACAGCAACGTATCGATGGTGCACGGCAACGACAGCAACGGGGGCATCATCGGCGGCGTGAACGGCAACAACATCGCGGCCATCGTCaacggcggtggcggcggcaaCGGCGGCGGCAACTGTCTGCCGCACAAGCTCCGCCACAAGACGCACTTGGGCGACAAGGACGTGGCGGCCACGGCGCTGCTGTCGCTGCAGGCCATCAAGCAGGAGCCGGGCAGCAGCCGGGCCAGTCCGCCGTGGGACGCGGAGGGCAGCAGCGACGAGCGCGACTCAGGAATCAGCTTGGGCGTCGAATGGGGCGTCCGGCCGTCGTCCGCTTCGGTGGCCGCCGCGTGCCCGACCGCCGTCTCGGTGGCCGCGCCCCGCGCCGCCGCCATGCAGTCACCGGCCGCCGTCACGATGAGCGGTGAACCGGCCGACGGTGCCGTGCACGCGACCGCTCCGACGGCCGCGGCCGCCGCCGACGACACCAGGCTCAAGTCCGAAGTGGCCCGGCTAGCGTCCGAGGTGGCCAGTCTTAAGAACATGCTGTCGTCCAGGAAGTCGGCCACCGCGGCCCCGGCCCAGTCCACCACCGTCGCGGTCAACTGA
- Protein Sequence
- MVADTASNYHHQQKTQPQQPQQPNQQQQQQQQHHHQQQQQKLHQQQQQQLHQIHLQRQQLQQQQQQNSGGAMPQYCSDMEQSGGPGSMRYDDSVSPGPESPGPGEPYPPGFDLTAHLQHKEFFAQRKQREFIPDNKKDESYWDRRRRNNEAAKRSREKRRFNDMILEQRVVELSKENHVLKAQLSAIKDKFGISGEAVVSVEQVMASLPTNEQVLSITKRPKLSTSSSSSSVGYSQNGSGPIPTSVIHQPVQSTTPKMNGSYYGGAQSDCGSPVDQHQLQQQQQQQQQQQQQGDRSNGVNGLPMSVAAAAVAAAAQAGYPPYPFAPVLPPLQPPSFEAAANSVLNLSRRPPSPYELSSGSGDDTSSSCVPISLAFVAAAAAAAAGGVVGPNGTLVGNNNNGNNNNHHHQHRHRHHFNGNGMMAMMANGGGGVPIAVLSGNNSNVSMVHGNDSNGGIIGGVNGNNIAAIVNGGGGGNGGGNCLPHKLRHKTHLGDKDVAATALLSLQAIKQEPGSSRASPPWDAEGSSDERDSGISLGVEWGVRPSSASVAAACPTAVSVAAPRAAAMQSPAAVTMSGEPADGAVHATAPTAAAAADDTRLKSEVARLASEVASLKNMLSSRKSATAAPAQSTTVAVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00940123;
- 90% Identity
- iTF_00133987;
- 80% Identity
- -