Rnym001158.1
Basic Information
- Insect
- Rhopalosiphum nymphaeae
- Gene Symbol
- creb3l4
- Assembly
- GCA_036289425.1
- Location
- JAZAQC010000002.1:5215150-5218436[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-19 3.4e-16 59.5 11.5 2 64 371 433 370 434 0.97
Sequence Information
- Coding Sequence
- ATGGGCGCGGCGGCCGTTAAAACCGGGCGCTTTAGCGCCGTCCGCTGCGGTAGCACTGCGCGCTCGACCGGCGGCCCATCCCTTTTCCCGTCCGCCAATCGACGCCGTCCGAACGGCGGCGAACAGattttattgaattattcggTTTGCCCACGATTTCTGTACCGATCGAGAGGCGACGTGACGACCATGTCGGCCGACGCCAAGTGTCCGTTGAGCATCGTGGACATGCTGCTCAACGATACATCGACGCTGGACGACTTCGACAAGCCGGCTCCAGACGACGACACCGACAGAGTCATGAACTGGGACCTGGAGAACGACAATTTCCTCGATTCTCTGTTGAAAATGGAAAATGACTCGACACCGTTCGAGTTTTTGTCCAGCAATGATGACTTCATGTCGAGTGCGGCCACCACTCCGAGATCCTACGACAACGCCGAGAGCAGTTCATGTTCAGACAGTGgACTTTCATCTGTGGATAATATGCCATTCAATCCAATATCAGAATCTACTCAGTCTGATGATGTCAAACCTAAAATGGAATTTGCATATGATTCTTTCGTCAAAGAggaaataatagatattgatgatgaagaAGAaattgatgatgatgataataaaaatgtaaaatatgaagaaaatgaccataaaaatgataatagttTAGGAGAAAAACCTACTATTATTCAACAACcacaattattgaaaactaCACCTCGCACAGTAGTGATATCACCAAAACAGTCTAAAGGGCCAATTGCTATTTCTAAACATCTGTCAAAACCTGTTTTTATACcaataaatttatctaatgTCAAAACAATTAAGgtGGTTAATCAGAATGGTAAAACAATCAATGCTGATGCATTCAGACGATTACAGTCCATAAACAATGGCAGAAGAATATTTGTGAGGAATAATGGTTCTATGGTCTCAAAATCTATGCCTGCATTAAAACAGACCAAAATTGTAATGTCTGACTGCACAAGTGATGAGTCCGATTCTATGTATCCACGGCTTCATTTATCAAatgaagaaagaaaattaatgGAGAAAGAAGGAATTAAATTGCCGTCACATTATCCTCTTACAAAGCACGAAGAAAGAGATTTGAAGCGAATTCGtcgtaaaataagaaataaaatttctgCACAAGATTCAAGAAAACGAAAGAAGGAATATGTTGACGGTCTTGAAGAAAGagtTAAACAGTGCTCTGATGACAATAGCAAGCTTATAAGAAATGTACGCTCACTTCAGACTGAAAATGAACGATTAAGAGCAGCTTTAAAACGTTTACAAAATGCTATCTCTCCGGGTGGTACAACAGCACAACCTGCCACATGTCTATTGGTTCTTATGATGTCATTAGCTTTAATAGCAGCCCCTAATTTGAGGCCTACAGTAACTGACGAAAAAGATATAATGTCCATAGAAGGTCAGGAGTCTAATACAGCTGTTCCAGGTCGATCGAGAAATTTGTTATTCTCCAAATCAGGATCACCCCTGAGCACCACTAATTTAAAGGATATGCTAAAGATGGTCGCAAATGGATCAGCTGATGGACAAAGTGATACCATTATGGCTGAACTTGGCGAACTATTGGATTTCAATAAAAGCAACAATAAAGATCATGATTATTCCAGAACAGCAATGgaagattattatatacccGAGTCTGATGATGGTTGGACTAAAGCTACAAAACGCTCTGCTCCATCTGAGTGGAATAATGAATTAGTTACACCAGATGTTAAGAATAAACGAGATACAGAGCGTGTGATTCTTGTGTCTAGCGATGAGGAATCTTATTAA
- Protein Sequence
- MGAAAVKTGRFSAVRCGSTARSTGGPSLFPSANRRRPNGGEQILLNYSVCPRFLYRSRGDVTTMSADAKCPLSIVDMLLNDTSTLDDFDKPAPDDDTDRVMNWDLENDNFLDSLLKMENDSTPFEFLSSNDDFMSSAATTPRSYDNAESSSCSDSGLSSVDNMPFNPISESTQSDDVKPKMEFAYDSFVKEEIIDIDDEEEIDDDDNKNVKYEENDHKNDNSLGEKPTIIQQPQLLKTTPRTVVISPKQSKGPIAISKHLSKPVFIPINLSNVKTIKVVNQNGKTINADAFRRLQSINNGRRIFVRNNGSMVSKSMPALKQTKIVMSDCTSDESDSMYPRLHLSNEERKLMEKEGIKLPSHYPLTKHEERDLKRIRRKIRNKISAQDSRKRKKEYVDGLEERVKQCSDDNSKLIRNVRSLQTENERLRAALKRLQNAISPGGTTAQPATCLLVLMMSLALIAAPNLRPTVTDEKDIMSIEGQESNTAVPGRSRNLLFSKSGSPLSTTNLKDMLKMVANGSADGQSDTIMAELGELLDFNKSNNKDHDYSRTAMEDYYIPESDDGWTKATKRSAPSEWNNELVTPDVKNKRDTERVILVSSDEESY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00940114;
- 90% Identity
- iTF_01305284; iTF_01328349; iTF_01303927; iTF_00972793; iTF_00133980; iTF_00135902;
- 80% Identity
- -