Rmai005899.1
Basic Information
- Insect
- Rhopalosiphum maidis
- Gene Symbol
- SIZ1
- Assembly
- GCA_003676215.3
- Location
- NC:41277954-41279888[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-21 2.4e-18 65.0 4.0 4 49 223 268 221 269 0.96
Sequence Information
- Coding Sequence
- ATGGTTATCACagataagaAGAGTAATCATTCCAAAATGTGTCAACGTCAAccatcaaacaaaaaaatagttaatctCTATATTTCGAATGCAATGCCCAgaacaaaatacaatgtaGTATTTCAACCTCAGCCTTTTTTCAAAAAGATACATTCAGTTATTGAACCGATGGCTATATATTGTGAATCAAAAGTTAAACTTGAAAATGGACAACCACAAGAACACGCTctgtttaaagttaatttcacGTTgccaatgttaataaaaagtatattatctgacaaaacaaaaaatttccgATTGCAGATCCGATTTGGAGAAAGTCAGGAAGGAAAGAGagatttattagataaattacCAGGACTAACAAAGATATGTGTCAATTCAAAGCTATCATCCACGACCAAAACAagtcctataaattataaaatatataaaaatttaatcgaaaacaattatatttcagtATTGTGGCCAATTTGTAAAAAACCATATTACATGTCGGTAGATATTGTAGAGATTATCTCGGTTAAAGATTTGGTGGAACGcatacaatttaacaatagACTATGTTCTGTTAAACTAAATACAAAAGCTAAGGCCATAGAATTGATGAAAAGTTCAGTTACAGAAATTCTTGATTCAACATcctttaagtttatattattgtgtccaatatccaaattaaaaatgaaattaccaACAAGATCTCTGAAATGTAGTCATTTACAATGTTTTGATCTGTATACattcattttattgaataaggTAAATCAAAAATGGATATGTCCGATTTGTAAGATACCCATTCTAATCAACGAATTGGTAATAGATTCATTTCTTTTGGATATTGTCAATAATTCAACTCTTCCTGAAAATTGCtttgaaataacattatatgccAATGGTGAATGGGTACCATGTGTAGAAGAGGCAATGGATGGTATTGAATACAATCGAAGCGAATCTGACGACGAAAATTCAGAAAATACCATTGTTCTTAAGGATTTGGATGATCCCGATTATGAAAATCTCCttaatgaaaataactttaatgaaGACAAAAAACCTGAAGAAAAACCTATCTTACCAATAACAGATGATTTGAAACCTAGTGAACCAATGTTAATCGATCTGACCATAGATGATACAGACATTAAAGAAGAACCGCTtactaaaatcattaaaacagAATATGCTGATGAATAA
- Protein Sequence
- MVITDKKSNHSKMCQRQPSNKKIVNLYISNAMPRTKYNVVFQPQPFFKKIHSVIEPMAIYCESKVKLENGQPQEHALFKVNFTLPMLIKSILSDKTKNFRLQIRFGESQEGKRDLLDKLPGLTKICVNSKLSSTTKTSPINYKIYKNLIENNYISVLWPICKKPYYMSVDIVEIISVKDLVERIQFNNRLCSVKLNTKAKAIELMKSSVTEILDSTSFKFILLCPISKLKMKLPTRSLKCSHLQCFDLYTFILLNKVNQKWICPICKIPILINELVIDSFLLDIVNNSTLPENCFEITLYANGEWVPCVEEAMDGIEYNRSESDDENSENTIVLKDLDDPDYENLLNENNFNEDKKPEEKPILPITDDLKPSEPMLIDLTIDDTDIKEEPLTKIIKTEYADE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01304540;
- 90% Identity
- iTF_01304540;
- 80% Identity
- iTF_01304540;