Rmai009982.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Rhopalosiphum maidis
Gene Symbol
RERE
Assembly
GCA_003676215.3
Location
NC:8922551-8935718[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-09 5.5e-06 25.3 2.0 1 35 244 281 244 282 0.93

Sequence Information

Coding Sequence
ATGGGTTCTACCCAAGGGGAGATTAGAGTTGGGCCATCTCAccaggCTAGATTACCAGATTTTCGAATAGctgttaacaatttaaatggaATAGTTGGAGAGGATAGAGAAGAAGCTCGTTGGGTATCGGGTACAGTGAGGGATCgtgatttattagtttatttacgtGCAGCTCGTTCCATGGCTGCTTATGCTGGTATGTGTGATGGGGGATCAGCCGATGAAGGTTGTATTGCCGCATCACGTGATGATACTACAATCAATGCTTTTCATATTctaCATGATTCTGGTTATGATCCAGGAAAAGCATTACAGGCACTAGTTAAGTGTCCAATGCCTAAAGGAATTGATAAAAAGTGGTCTGAAGAGGAAACGaaaaaatttgtaaaaggaTTAAGGCAATATGGAAAAAATTTCCATAGAATTAGAAAAGATTTACTACCCCATAAAGATACtccGGAATTAgttgagtattattatttatggaaaaaaacaCCAGGTGCAAACAATAATAGACCACATAGAAGAAGACGACAAGGATCATTAAGGAGAATTAGGACTACTAGAGCTACCAGACCATCAAGTGCTCAAAAAGACGAAACtagcacAGGTTCTCGTCCTTCTCCTATTTCAAAAGAAACTGGTGATGGAAGTTCTGGTGTAAGTGAAGATGATGGTGGTAATACAGAAGATGACTCTGACTCCAGGGATAATACTACATTATTTCGATGCCATCATTGTTTTGCCACAAgcACTAGAGATTGGCAAAATGCAGCTATTGGACCTAAACAAGGcaatttattgtgttttgaATGTCgaagttataacaaaaaatatggcGAATTACCACCTACACCTCAATCACCTGCTGAGTGTCCTAGTCCAACTACTTCTGATGTTACTGTTACAGCTGAATCGCCAAGTAGAATGCGTACTCGTAATAAATCAAAAGAaacgCCTACGAAAAGTATTCAAAGTAGATCAAAACGTAGCAGAGCAAATACACCAGAAATCAGTcaagatattgaaaaaaaagaaatgtctGTGGCATCTCCCTCAACtgataaatcaaaatctaAGGGAAATTTGAGTGATACTCCAAAAAAACGATCTTTAGATACTGATGGTGAAGAAGAAAGTCCACTGAAACGTGAATCAAACAATTCCGAAAGCACTAGTTCAGATGGATATTCTGGTAATGACGATGAAGCTCAAGTTGCTACTGTAGCATCAAGCGAATCTATAAACCAAGAAACAGAAGTACCTGACATAATGCAAACAGAAACACAACCTGAATCTGAATTTACTCCTGTTGTTATTCCTAAAGAGGAACCTATTCAAGAACAAAACACTGAATCTCAACCTGATGATATAATGATGATTTCAgctgataataatagtagtgaAAATGTTTACGTTAAAAATGAAACCAACGATGAGCCCATGAGTGTTGATGTACCAGAAGAATCTCAAGTGTCAATTAATTCAACTGATGAAGTTGAAAAAGAATCTGTAGAAAAACTATCTTCATACTCGTTGCAAAATTCTCAGTTTAGCACTGAAAATGTAACACCTTCAGATAACGATGTTGAAGTCAAAGAAGAATTAACTACTACTACAACTACTTCAGAAGAGATTTCTCAATCACATGTTGAACAGCCAATTCAAGAAGAATGTATGACTTCACCAATTGCTTTAACTTCTTATTCACCTAGACGTTCTGAAGCAATAAAACCACCCACTCCTAACCAATCTCAAATACTTGTACCTAATTTTCAAAACTCTTTTAACGATCAAGAAAGAATTGGAGATAAGTCAACGTTAAATGTGCCTTCTGTTCCTACACCTGTGACACAATCTTTTACTACTCCATTTTATccatataacaataatcaaatagcagataaaatacatatgcCTGTGTATGAAACACAGTTGGAacctcaaaatttaaaaataaaacaagaaaTATCAGATCCTTTACAATCTTTAAAAGAAGTAAAAGTACCAGGTTACAATGGTCCTGGTGCAGTTTCACAACCACTACAAGCAACAAGCTCTGCCATTACTGTTAATACAGATTTAGCTAATATGTCAGTTGAAACTATTAAAAAGGAACCAGAACTAAAATCTCCATTGCAAGTCAAAACACATACCCAAACCTCATCAGCGCCAATATTTGCTCCACCATCATCTATTCCTCAACCCGTAATGCATCCTTCACAACAAATGTCACAATTAAGTCGAATATCTCCTGCAGGTGGAGTCCCACCCCATCATCCTTTTGCTGCTATGCATCCACACCATCCTTTATTACACCCCCATTCAATATTTGCAGCTGCTGCAGCAGCACATGCAGTTCTACATAATCCTTATCATCCTCATGCTCATCCTGCGTATGCGGGATATCCACCATATGGGTTTCCATATGCACCTTATCCTATTCCTCCACCAAGTAAGCGAGGTCCTGATGAAACGACAACAATGACAGCTCATCATCATCATTCAGTTAGTACCAGCAGCCGCCTAGATGAAGAAATTACTCATCATTCTAGCTCAACGTCAGTTCAACATCTTTCAAGTTCTACAGATAAACATACTTTATCCCATTCAACTACTTCATCTTCTCAGTTGGTACAACACAAGTTAAAAAGAGGAAATAGTCCTCAATCGGGCTCAAGTCATATATCAGCAACTCTATCACACACTACGTCTTCGTCATTATCTACTCATGGTGGCGCTGGTAATACAGGAAATGGTAGTCATACACATCATCATCAGCATACTCATCACCATCAACATGCGTCATCGTCTGTTcatgGATCAAGTCGAAGTTTACCTCCCCAACCAAGTGCTATTAAAGGTATGCCACATCACACACCATTATCTTTGGAAGCTTTGAGAGCTCATACAGCAATACATgGTTATATGGGAGCTATGGAATTAGCAACAGGAATGCCACCTGGAATGGAAATGATAAAACCCGATCAAATGATGAGTCAAAGTACGGATGATGGTAACAATGAAGAAGAGAGTTCACCAAGTCCTAATTTACATGGACATACTCCTGAACCTAAAACTGATGATAGTGAATGTCATCGTAGTCAAAGTGCAatatttttgagGCATTGGAACAGAGGTGATTATAATTCCTGTTGTCGTACTGATCTTACGTTTAAACCAGTTCCTGAGTCCAAACTAAGTAGAAAGCGTGAAGAACGAACCAGGCGACAAGCTGAGAAGGAACGTGATGAACGAGATAAATCTCATTcaagaaaaaattcaaacaatgaTAAACATATGCAAGCCCCTAATGAACAGATAACTAAGCCACCTTCTCGTGGTAGCATTGAAGCACTTCAATCACCCTATGATAGGGTTAATAGTTATCAACACAGAAGTGCACCAGCAAACACTCCAATGTATCCAGACACTCCTGCATTAAGACAGttaagtgAATATGCACGACCACATGCTGGTTTTTCACCAGTGTCCTTACCACGGTCAGCGCCAGGATTAGGTTTGCCACCACATTGCATTGATCCAATGttacattatcaatttaacATGTATCCACGAGACagatttgaatATGAACAAATGGAACGTGAAAAACGTGAAAGGGAATTGAGGGAACTTCGTGAAAAAGAATTGAATGATAGACTTAAAGATGAATTTTTAAAGTCTGGATCATCTGGTCCTCCCAGAATTGACCCACATTGGATTGAACTTCAGCGTCGCTATGGGGGAACACCTGGTATGCATCCATTTGGTTTGTATACTTCCCCTGGAGCTCCTAGTCAGCCTAGTACTCCTAGTAACGTGAATCCATTAGATCGAGAACGTATGGATAGAttagctGGTGGGCCAAATGGAAATTCAAACCAAAATAATTCTAGTGGTGGTCCTCCTGGCCCATCTGCTGAAGAAGCAAATCGTCTAGCATTAGCAACAGATCCTATGGTCAGATTGCAGTTGGCTGGAATTTCGCCTGAATACCATGCACATACACATGCACACTCTCATACTCATCTACATTTACATCCAGGACAACAAGCAgcagctgctgctgctgcagcTGCAGCTGCTGATAGCTCAGCTTCTGCTTCTTCACCTTCAGTTTATCCACTTGGTTctTCTGGCAGTTATCCTCGTCCAAATCTTATGCCTGGTCGTGATCCTACATTAGGACTTCATCATCCAAGTGATGTTTTAGCCAGGCCATTTGCAGATCAAGTAAGACCGTTTCCAGATCAAGTTAGACCATTTCCTGATCAAgttGCACATGAACATTTTCAAAGACAAATGATGATGGAACGTGAACGTTTTCCACATCCAGCTTTAATGGCTCATGAAgaatttattaggcAACAACAACAAAGAGAGCGAGAAATGAAAGTTCGTGCACTTGAAGAAGCTGCACGAGGAAGGCCATAA
Protein Sequence
MGSTQGEIRVGPSHQARLPDFRIAVNNLNGIVGEDREEARWVSGTVRDRDLLVYLRAARSMAAYAGMCDGGSADEGCIAASRDDTTINAFHILHDSGYDPGKALQALVKCPMPKGIDKKWSEEETKKFVKGLRQYGKNFHRIRKDLLPHKDTPELVEYYYLWKKTPGANNNRPHRRRRQGSLRRIRTTRATRPSSAQKDETSTGSRPSPISKETGDGSSGVSEDDGGNTEDDSDSRDNTTLFRCHHCFATSTRDWQNAAIGPKQGNLLCFECRSYNKKYGELPPTPQSPAECPSPTTSDVTVTAESPSRMRTRNKSKETPTKSIQSRSKRSRANTPEISQDIEKKEMSVASPSTDKSKSKGNLSDTPKKRSLDTDGEEESPLKRESNNSESTSSDGYSGNDDEAQVATVASSESINQETEVPDIMQTETQPESEFTPVVIPKEEPIQEQNTESQPDDIMMISADNNSSENVYVKNETNDEPMSVDVPEESQVSINSTDEVEKESVEKLSSYSLQNSQFSTENVTPSDNDVEVKEELTTTTTTSEEISQSHVEQPIQEECMTSPIALTSYSPRRSEAIKPPTPNQSQILVPNFQNSFNDQERIGDKSTLNVPSVPTPVTQSFTTPFYPYNNNQIADKIHMPVYETQLEPQNLKIKQEISDPLQSLKEVKVPGYNGPGAVSQPLQATSSAITVNTDLANMSVETIKKEPELKSPLQVKTHTQTSSAPIFAPPSSIPQPVMHPSQQMSQLSRISPAGGVPPHHPFAAMHPHHPLLHPHSIFAAAAAAHAVLHNPYHPHAHPAYAGYPPYGFPYAPYPIPPPSKRGPDETTTMTAHHHHSVSTSSRLDEEITHHSSSTSVQHLSSSTDKHTLSHSTTSSSQLVQHKLKRGNSPQSGSSHISATLSHTTSSSLSTHGGAGNTGNGSHTHHHQHTHHHQHASSSVHGSSRSLPPQPSAIKGMPHHTPLSLEALRAHTAIHGYMGAMELATGMPPGMEMIKPDQMMSQSTDDGNNEEESSPSPNLHGHTPEPKTDDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPESKLSRKREERTRRQAEKERDERDKSHSRKNSNNDKHMQAPNEQITKPPSRGSIEALQSPYDRVNSYQHRSAPANTPMYPDTPALRQLSEYARPHAGFSPVSLPRSAPGLGLPPHCIDPMLHYQFNMYPRDRFEYEQMEREKRERELRELREKELNDRLKDEFLKSGSSGPPRIDPHWIELQRRYGGTPGMHPFGLYTSPGAPSQPSTPSNVNPLDRERMDRLAGGPNGNSNQNNSSGGPPGPSAEEANRLALATDPMVRLQLAGISPEYHAHTHAHSHTHLHLHPGQQAAAAAAAAAAADSSASASSPSVYPLGSSGSYPRPNLMPGRDPTLGLHHPSDVLARPFADQVRPFPDQVRPFPDQVAHEHFQRQMMMERERFPHPALMAHEEFIRQQQQREREMKVRALEEAARGRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309195;
90% Identity
iTF_00468880;
80% Identity
iTF_01304119;