Basic Information

Insect: Rhopalosiphum maidis
Gene Symbol: Hivep2
Assembly: GCA_003676215.3
Location: NC:17916718-17939901[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00021 0.015 15.1 0.4 2 23 28 50 27 50 0.97

2 11 0.14 9.7 6.3 0.3 1 23 177 200 177 200 0.91

3 11 0.00078 0.056 13.3 0.6 1 23 208 230 208 230 0.97

4 11 7.8e-05 0.0055 16.5 3.3 1 23 236 259 236 259 0.98

5 11 0.0091 0.65 10.0 2.9 1 23 521 544 521 544 0.95

6 11 0.0014 0.099 12.6 0.5 3 23 732 752 731 752 0.98

7 11 1.3e-05 0.00096 18.9 3.1 1 23 758 781 758 781 0.97

8 11 0.0053 0.38 10.7 0.5 1 23 808 832 808 832 0.97

9 11 0.62 44 4.2 0.5 1 23 909 932 909 932 0.90

10 11 0.0005 0.036 14.0 2.2 3 23 966 986 965 986 0.97

11 11 0.037 2.6 8.1 3.2 1 23 992 1015 992 1015 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00021	0.015	15.1	0.4	2	23	28	50	27	50	0.97
2	11	0.14	9.7	6.3	0.3	1	23	177	200	177	200	0.91
3	11	0.00078	0.056	13.3	0.6	1	23	208	230	208	230	0.97
4	11	7.8e-05	0.0055	16.5	3.3	1	23	236	259	236	259	0.98
5	11	0.0091	0.65	10.0	2.9	1	23	521	544	521	544	0.95
6	11	0.0014	0.099	12.6	0.5	3	23	732	752	731	752	0.98
7	11	1.3e-05	0.00096	18.9	3.1	1	23	758	781	758	781	0.97
8	11	0.0053	0.38	10.7	0.5	1	23	808	832	808	832	0.97
9	11	0.62	44	4.2	0.5	1	23	909	932	909	932	0.90
10	11	0.0005	0.036	14.0	2.2	3	23	966	986	965	986	0.97
11	11	0.037	2.6	8.1	3.2	1	23	992	1015	992	1015	0.95

Sequence Information

Coding Sequence: ATGTCATCGGAAATGTTACGTGTAGATAATCTGCGACAACGGTTGTTCTGCAATTCCGTGTTGGATACAAAACGGGAAAGCCGGTGTCCTGTGTGCAACGCCATGTTTTCAACCACTTATAGTATGCGTCTGCATTTACAGACCGTTCACATGGACTTAAAACCACAAAATCTTACCGCCAAAACGTTTTATCGCGAgtttaacaataacaacagcattaacaataataacaacaataacagtagtaataacaacaataacaacaatacgGCCTTCGCCGCAAAGTCGCCGGCTAAAACGACGTCGTTCAACAAAAGTCCCGAACGTGCGCACGTCACACCTGTAAAATCTTCGTACAACGGCGACTCAACGTGTAGCACAGATTTTAGTGATGGATATCCGTCGGACAAGGACTCGTATTTCGGCAACTCGCCCAAAGATGATATCCCTCTGTCAGTTGTGGGTGGCGGTTTCATGTCGCCGGCCAACAAGAGAAGTAGCAATGGCCACATGAAGGCCAAGCGCACGTATGCGTGCAGGTTATGCTCGACCGTTTTTGGAAATTTGCGGGCACTTAAGGGCCACAACTCGTCTAGCCACAATAAATCCACCAATGGCATGTACGCGTGCAACATTTGTGAGTTTGCCAGCACTGAAAAAGCGTCGCTAAACCACCACATGAAAGGTCACACGGGCGAGACACCGTACGTGTGCAAAAAATGTTCGTACGCGTTCACCACGAAAGCCAACTGCGAACGGCACCTGCGCACCATACATAAGGCGTCCAACGCCGAGGTAAAAGCGTCGATATTGTTCAAGAACGAGGAGAAATCGGCCGGGTCAGTGTTGTCGGCTAACGACGAAGCAGCCGCCGACAAGAGTGAAGAACTGTTCCACCACCTTCGTCTACAGCACCACAATCAGGCAACAACGGACTATTCTCAGTACGAATCATCCGGCCAAAAGAGCTCGGAGGACGATGAAGACGAGTACGATGAACCACTGGACCTCAGCATGAAGCGTTTTAAACAGGACTTCGACAGCGAGCCGCAAGATTTGTCAATCAACAGTAAGaggtcgtcgtcatcgtcgtcttTTACAGCTGCCGCCACCGTCGGTGATCACACAGACGAGGAGGACTGTAACAAACCGACTGCGACGATGCCGTTCCGCGAGCAATTTGTACCGCACGCCCCGCCCGGCTTCATGGACCTATCATTACCCACTCCTTTACACGCGTATTTTCTCAACGAACATCGTATGTTTTTCAACGGCATGTACCCAGCCGCGGAACGGATGCTGCCCATACCACTCACCGTCGACATGATCCGTGCAATGCGGCAGATGAACGAACCGGTACCGGTCCCAGCTCAAGAGCCGGCTGATACCCTTGTCCCATCGAAGCCTGATACACCTGAGCCTGTGACCGTACCACCTCCGCCACCTATTCCGTCGTCCGTAGACGTTGCGCAAAAACCAAAAGACACCAACGGGTTGAGATTAGTGATGAAAAACGGCATTCTGGTGCCCAAACAAAGGCGGTTCAGAACGGACAGGCCACATGTCTGCGAGACGTGCAAACGGGCATTCACATTGAAATCAAACCGCGATCGGCACGTTAAAAACCAACATCCGACCGATTGGCACAAGAAACCTAGGTCGCTGTCGTCCAAGTCGGAACCGCAGTTCTCGGCTGTCAAACAAGAACAACAGGACACGTCGCCGATTTCGAATCAAGTGAAAATGGCTTTGTCGTTGAAATGTCGGCCGTCAGAACAGCTGTTACGGACCGAAGATGAAGTAGATGAAGACGAAGAAGATGACGACATAGTGGAGGAGGAAGACAAACTCGTCATAGTGGAAGATGGTGGAGAGCATAACAAGCCCGCCGAAGTTAAGGAAAAGTGCTCTGAGATCAAAGAGGAGTCTGCCGATCTGGTTAGTGTATCCAGATTGCTGGACAATGCTTCGCACCAGACGTTTCCGCAGTTCACCAGATCTGATGAGGACCATAACGAGGTGACCAGCAGCGAAGAAGAGCACAGCGAGGCTGCTAGCTATTCTGAAAACGACGGTTCTAGTATTAACGCAGTGAACAACAACATCGATATAAATTTCAACACAGACAAGGATGAGAACCGAGAGAAACGGAAGAAAGTTAGTGCATACGCGGCTGCACCCAACAGGGTGTTATGTCCGTTCTGTTACCTTTCGTTTCCGTGGACTTCGTCATTGAAACGTCATATCCGCACGCACACGGGCGAAAAACCGTATCAGTGCAAACACTGTCCGCTATCGTTCTCGACGAAGTCTAACCGTGACCGGCATATCCTGCGCCTGCACTGTACACCACCTAGCAAGTCAGCCGCTTCGTCCGACAACGAAACAACCGCCGCGGCGCCGGCCGACGCTAAGAACGCGTACAAGTGCACGTCGTGCCCAAACGTCGCGTTTTCTAAGCGCAAAAACTTGATCAGCCACATAAATCGGGTGCATTTCGATAAGAATAGTGGTAGCGGCGGTGTAGGAGAAGACGACGAACGAGGCGGTGACGGTACCGAAGAAGATGGTGGTGAGTCTGAACGTGATTACTCGACAATGACTATGTTCAACGGATGGTGCGGTAATAATAACGCGACTTCGGCGACCACCACGGCCAACACCACCACCTCAACTACAGCCGCCACCACCCCGTCCAACACAGTCACCGGATCCGAACCGTGTTTCAAGTGTCACCTGTGCGACAGCAGCTACCTGGATAGACAGGGCGCTTTGGACCACATCAGGATCGACCACGCCGAATGTTATGAGATACTGGTGTCGCAGGGAGCCATGGACAACGACCACGATTCGTCGGCCGTCAAACAAGACGACGTGGAAAACAGAAAGGTCCTGTGTGCGTTCTGTTTGCACCGTTTCTACTCTGCCGAGGACCTGCGCCGGCACATGCGCACCCACACGAAGGAACAGCCGTTCGCGTGCTTGTCATGCAAGCGCCGGTTCACGCTCAAGCACAGCATGGTCCGGCATATAGCCAAAAAACACGGAGGCTGCCAAGACCAGCAATACGGAGGCGGTGGCGCTGGAGGTGGCAGCGACCACGAACGAAGATCCGCCAGTCCTCCAAACACCCCTCCACTAACGGGAGGTCCGGTCACCGGTTACGATGATTGCTGCAGCAACCGGACAGACACGGGACTGATCGGCACGCTGCTCGGCATCCGCGACAGCACTGTCATCGATCAGGTGTTGCAGACAAAGTCGCCGGAGGACGCGGCCAAAATGTTGGGAATCAAAAGCAGCAGCGACTAG
Protein Sequence: MSSEMLRVDNLRQRLFCNSVLDTKRESRCPVCNAMFSTTYSMRLHLQTVHMDLKPQNLTAKTFYREFNNNNSINNNNNNNSSNNNNNNNTAFAAKSPAKTTSFNKSPERAHVTPVKSSYNGDSTCSTDFSDGYPSDKDSYFGNSPKDDIPLSVVGGGFMSPANKRSSNGHMKAKRTYACRLCSTVFGNLRALKGHNSSSHNKSTNGMYACNICEFASTEKASLNHHMKGHTGETPYVCKKCSYAFTTKANCERHLRTIHKASNAEVKASILFKNEEKSAGSVLSANDEAAADKSEELFHHLRLQHHNQATTDYSQYESSGQKSSEDDEDEYDEPLDLSMKRFKQDFDSEPQDLSINSKRSSSSSSFTAAATVGDHTDEEDCNKPTATMPFREQFVPHAPPGFMDLSLPTPLHAYFLNEHRMFFNGMYPAAERMLPIPLTVDMIRAMRQMNEPVPVPAQEPADTLVPSKPDTPEPVTVPPPPPIPSSVDVAQKPKDTNGLRLVMKNGILVPKQRRFRTDRPHVCETCKRAFTLKSNRDRHVKNQHPTDWHKKPRSLSSKSEPQFSAVKQEQQDTSPISNQVKMALSLKCRPSEQLLRTEDEVDEDEEDDDIVEEEDKLVIVEDGGEHNKPAEVKEKCSEIKEESADLVSVSRLLDNASHQTFPQFTRSDEDHNEVTSSEEEHSEAASYSENDGSSINAVNNNIDINFNTDKDENREKRKKVSAYAAAPNRVLCPFCYLSFPWTSSLKRHIRTHTGEKPYQCKHCPLSFSTKSNRDRHILRLHCTPPSKSAASSDNETTAAAPADAKNAYKCTSCPNVAFSKRKNLISHINRVHFDKNSGSGGVGEDDERGGDGTEEDGGESERDYSTMTMFNGWCGNNNATSATTTANTTTSTTAATTPSNTVTGSEPCFKCHLCDSSYLDRQGALDHIRIDHAECYEILVSQGAMDNDHDSSAVKQDDVENRKVLCAFCLHRFYSAEDLRRHMRTHTKEQPFACLSCKRRFTLKHSMVRHIAKKHGGCQDQQYGGGGAGGGSDHERRSASPPNTPPLTGGPVTGYDDCCSNRTDTGLIGTLLGIRDSTVIDQVLQTKSPEDAAKMLGIKSSSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00135687;
90% Identity: iTF_00134839;
80% Identity: -