Rmai009498.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Rhopalosiphum maidis
Gene Symbol
Znf541
Assembly
GCA_003676215.3
Location
NC:75572200-75811640[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-10 2.6e-07 30.1 0.0 3 46 1205 1248 1203 1248 0.96

Sequence Information

Coding Sequence
ATGACAGCAGTAAATACTGGGTTGCCCGGGATCCGCGTGCCGTTGAAAAGCAGCTATGCGTCGGCCATGCCCCAGCAGACGGCCGTGTTTATGTACAGCACCGCTGGCCCGGACGGACAGACAGTCACGTTGCAGCTGCGCGAGACAGACGAGACCATCGAGCTGCCAGCGTCCATGCTCTCAAAAATGTCCCGGCAAACGGATACGGCCACGCTGTCCATCAGCTACCAGGACTCGGCGGAAGTGCTTACTGACGGCACCATCGACCTGCTTCTGGCCACCACACCGCTCCATTCTTCCGGTGATGGCCAAAGTACAGATTCACCAGGTTTCGAGCTTTTCGATTCAGATAACGGCCACGATCTCACGCTATCACCACAAACTTTTACTGCTAATACCACAGCTGAGTCTTTTCTAGTCAACGACAACTCAAACAGCATAGGCATACCCGTCAATGAGTCTGATacagTTGGAAGCTCAGAAGACGTTAAGTCAGCAGATTTAAACAAGTTAAATATGTCGAGGCGGTCAAAACCGGTGGCGAAAGCTATGTCTCCCAACAGACAGGGTCCCCAGCAGTGTATCACCTGCGGGAAAGTGTTTGGGAACGCGTCTGCACTGGCCAAACACAAGTTGACACATAGCGATGAAAGGAAGTACGTGTGCAACGTTTGCAGCAAAGCTTTCAAAAGACAGGACCACTTGAACGGGCACATGCTGACACATCGGCACAAAAAGCCGTTTGAATGCAAGGCCAACGGATGCGGCAAGTCGTACTGCGACGCGCGGTCACTGCGCCGGCACACGGAGAACCATCACCACCACCGGCCGTCTTCCAACCAGGGCTCGCCGCCCGCATCGCCGTCCTCGTCCACAAGTTCTGGTTGCATACAATACGCGCCGGCACCAATGCCGTCGCCGCCCGGCACGTCCGCGGCCGCTACGTCCACCACGGTGGCCACCGGCGCGCCGTCttcatcatcgtcgtcgtcgtcgtcgtcgtcgtccgcgTCCGCGTCGTCCACGTCGACCACGTCCGCTTCCGCGTCCACCACGGCAGCGTTCGGCTCTATGTCAGCCATTTCGGTTTCggcgtcatcgtcgtcgtcgtcgtcgtcgtcatcgccgTCGACGACAACCACATCTGCCACGTCACACCAACAACAACAGCCACACGAGGCGACGCCCAGTCAGCTGCAAAAGCTGCTCAGCGCCGAACCGCTGTCATCGACCAGCAGCAGCGGCGGTGGTGGCGGCGGCAGCGGAAGAGCACTTTTGGCAAAGAATGGCCAACCGGAAACGAGAAATGCGACAGACAACGAAGACAGTTTTACAAAACagcaatttgatattattcaaCAGATTATGCATCACACTCAACAACAAATAGCGTCATCAACtgtttcaaaaaattcgaacTTGAAGAATTCGTCCAACGCAAAAAATTGGAACAGCCAACagACCTCAAACGGCCCAACAGACTCTGCAAACAACAAACAACAGCACTCACAACCCGCCGCCGTTGCAGTGCAACCTAAACCAGAACAAAAGCCCGTGGAATGTAACCTGTGCCATCGAAAGTTTAAAAACGTACCAGCTCTAAATGGACACATGAGGCTGCACGGAGGATACTTCAAAAAGGAAACTGATTCAAAAAAATGGGAAAAAAAAGAAGCATCAGGTCCACCCTTACAGACAGCCAGCATGAGTGTCAGAGCTTTAATCGaagaaaaaatcatacaaaaaaGGACCACAAAACCAAATTGTCCAAATCAAAACGGACTAACATattcaaGCTTGAGCCGCGAGAAGGAAACGGTGGTGCAGCAAGTGGTGAGCAGGAGCACAGCGGTGCACGCAGTGATGACTACCAGCGGTACGTCGTTCGCGGTTCCAGCGGTTCCAAACACTACTTCCGTGGTGGACACGACAGTGGGCTTGGCCGACTCTACGGCCGTAGTGTACACGGACGTAATACTAAAAAAGACCGGTGTGAAAAGGGCATGCTCGGATCCGGGATACCAGTTCAGTCACAGCACCAGCCCgcaaatagatattaattactCCGGTTCACCGTACACACTGAATCACGGAAACagtggcggtggcggcgaAAAGGAAACCGATAACCGGGGCTATTATTCGCCGGGACTCAACGACGATATATTTCCTAACGTACAAGCCGAAACTATGCTCTTACAGGCCGTCGACTCCGTGCAGCTGGCCAACACGATACAGgcGACGGACATGCAAGACATGTCGTGTTTAGATGATTACGATGGTATGACCGATCTTCAAAACAATGAAGATTTCCAAGCCGTATTAAACTCTCCACTATCAGCTAGCTTAGCTGATCTAGCGTACAGTTCAGGACAAACCATGTTTACAGATTTAGGTAGATCACCTCTTCCATCCCCAAGTTTTACCTATCCTACTCCACCGGCTAGTCAAGAGGGTCAATCTCCTTCGCTAAATTTTCATTCGGTTATGTCAAACGGCCACCTTGGTGACTTTTTTTATTCGTCTGACATGTCAAGTTCAGAAGCTGTTGAAGCAGCTTTAAGTGAAGTGTTGCCAAATTTCGAGTCTTCTACAGATTCGCCACTATCAGCCAATACACCCGTTTCATCGCCGATGTCAATACATAATTCATCCGCTGCACCGTCACCATTACCTAACCATCATCAACACACATTACAGGTAATGATGCCAAATTCAGAAGACCCATTATTATCCAGCAACCCTAAGGAGTTTAGGAAGAAATTCGATTACCAAACATGTCGCTTATACGGGGTCAATGGAACCATGGCCCAAGTTATTGACGGcagtcaatttttaattgacaaaaatggagatttaaaattagtccAAGCCAGTTACCAAAATCCTGGAACCATGTTCGTACAAACAGAAGCCCAGTTGATCGAAAAACATATACCAGTTATCAAACAACAAAAACCAGACAATAATCAAAACTTTGAAGATTTAGATGACATTTTCCTAAATCCGTCAAGtattccGCCAAATGTTACAAATCGATTAAACAGAAAACGCTGTTTTGGAGAAACTATGACGTACAAACCGTTCCGATCCAGATTGCGTAGTCATAGACTTGGTATGTTAAATGAACCAACATTGCAATTCACTCCAAAACCTATGTTGAGTCCTTCTAGAAACGGAAGAGGTCTTTATTGGCAAGCAGTGACTTCGTGGCCAAGCTCTTCAACTGTCAAagagGTTATTGTTGAAGATTGTGTAGGACTAGATTCACCACCAGAGTGTGATGTATTACCACACATTAATCTTGGTCCAAATTTCCAAGCTTTAATACCACCAGTAAGCAAAATCAGACCAATTCGAGAGCCATCtagtgattatttattatgggaCCCTTGTATTACAAATTCAGTTTCTGATCGAGAAGTTGAAATGTACATGGACTTTGCATGCTGTGCAGCAGTACCAGGTGGTGGAAGAAACAAAGAGTATGCTTTACATTTGCTACATCTTTGCAAAGGAAATGTTCAGGAAGCAATGTTAAAATTGATGCAGCCAACTCCGTATCTCCCACAAGGACATCCTTTgatgaaatttgaatacacAGAATCTGATCACTGGACCCCAAATGAAGTATCTATGTTTCACAAAGCTATATTCAAATATGACAAAGATTTTGCATTTATATCAAAAGAGTTGGGAACGAAAACTATGAAACaatgcatacaattttattatttgtggaAAAAAGTTTGTCCGGAAGACTATAAACAGTTTCAATTCCAAAGACGAAAGTCGAGGAATGAAGATGCAATGGTCAATCCGAAATTAGACATTCCTACATTCAGCAACAAAATAGGATTAGCAGCTCATATGAGGCTACATACTAATGGAACTCCAGATCGAAGGCAAACCTTGACACCAACACATATTGATCCGAATTACGAAGAATTCCCTTGCAAGATCTGTGGaaagATATTTACCAAAGTAAAGAGTCGAAGTGCCCATATGAAATCGCACAGACCTCCTGACGCAGAACCAAAGAAACCAAAATTGGACCAGACGGTCGATTACGGTCAAATGATGCAACTTAAGACGGTTGCAACGCCAATTCAGTTACATAGACAATGCTAA
Protein Sequence
MTAVNTGLPGIRVPLKSSYASAMPQQTAVFMYSTAGPDGQTVTLQLRETDETIELPASMLSKMSRQTDTATLSISYQDSAEVLTDGTIDLLLATTPLHSSGDGQSTDSPGFELFDSDNGHDLTLSPQTFTANTTAESFLVNDNSNSIGIPVNESDTVGSSEDVKSADLNKLNMSRRSKPVAKAMSPNRQGPQQCITCGKVFGNASALAKHKLTHSDERKYVCNVCSKAFKRQDHLNGHMLTHRHKKPFECKANGCGKSYCDARSLRRHTENHHHHRPSSNQGSPPASPSSSTSSGCIQYAPAPMPSPPGTSAAATSTTVATGAPSSSSSSSSSSSSASASSTSTTSASASTTAAFGSMSAISVSASSSSSSSSSSPSTTTTSATSHQQQQPHEATPSQLQKLLSAEPLSSTSSSGGGGGGSGRALLAKNGQPETRNATDNEDSFTKQQFDIIQQIMHHTQQQIASSTVSKNSNLKNSSNAKNWNSQQTSNGPTDSANNKQQHSQPAAVAVQPKPEQKPVECNLCHRKFKNVPALNGHMRLHGGYFKKETDSKKWEKKEASGPPLQTASMSVRALIEEKIIQKRTTKPNCPNQNGLTYSSLSREKETVVQQVVSRSTAVHAVMTTSGTSFAVPAVPNTTSVVDTTVGLADSTAVVYTDVILKKTGVKRACSDPGYQFSHSTSPQIDINYSGSPYTLNHGNSGGGGEKETDNRGYYSPGLNDDIFPNVQAETMLLQAVDSVQLANTIQATDMQDMSCLDDYDGMTDLQNNEDFQAVLNSPLSASLADLAYSSGQTMFTDLGRSPLPSPSFTYPTPPASQEGQSPSLNFHSVMSNGHLGDFFYSSDMSSSEAVEAALSEVLPNFESSTDSPLSANTPVSSPMSIHNSSAAPSPLPNHHQHTLQVMMPNSEDPLLSSNPKEFRKKFDYQTCRLYGVNGTMAQVIDGSQFLIDKNGDLKLVQASYQNPGTMFVQTEAQLIEKHIPVIKQQKPDNNQNFEDLDDIFLNPSSIPPNVTNRLNRKRCFGETMTYKPFRSRLRSHRLGMLNEPTLQFTPKPMLSPSRNGRGLYWQAVTSWPSSSTVKEVIVEDCVGLDSPPECDVLPHINLGPNFQALIPPVSKIRPIREPSSDYLLWDPCITNSVSDREVEMYMDFACCAAVPGGGRNKEYALHLLHLCKGNVQEAMLKLMQPTPYLPQGHPLMKFEYTESDHWTPNEVSMFHKAIFKYDKDFAFISKELGTKTMKQCIQFYYLWKKVCPEDYKQFQFQRRKSRNEDAMVNPKLDIPTFSNKIGLAAHMRLHTNGTPDRRQTLTPTHIDPNYEEFPCKICGKIFTKVKSRSAHMKSHRPPDAEPKKPKLDQTVDYGQMMQLKTVATPIQLHRQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00463580;
90% Identity
iTF_00463580;
80% Identity
iTF_01304420;