Rmai004224.1
Basic Information
- Insect
- Rhopalosiphum maidis
- Gene Symbol
- mybA_1
- Assembly
- GCA_003676215.3
- Location
- NC:30006054-30010608[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.0027 1.8 8.1 0.0 22 44 286 307 272 309 0.91 2 5 7.4e-13 5.1e-10 38.7 1.2 2 46 316 362 315 362 0.96 3 5 7.4e-08 5.1e-05 22.7 0.3 1 44 368 417 368 419 0.94 4 5 0.049 34 4.1 0.0 23 44 446 467 429 469 0.80 5 5 2.6e-11 1.8e-08 33.8 0.0 1 43 477 522 477 524 0.94
Sequence Information
- Coding Sequence
- atggaCGCATGCGGCAACCCAATTCCTGGATCATCAAaagagtttataaatatagaaactgCTGAATCTGCTTATGACTTTACATGGTTGGAAAATGAGCTCAATAATGGTGATGCTAACGAAGATTTAAGAACTCCAAAAAGTATAGTTaaaagtttgaataaaaatgacagttttaaatttgaacaaattGAAACAAATCCTAATATTCAAGATTTTTTTGAAGAAATTAATTGCATAGACTTTAATCAAGATATTGTACAAAGTAATTATACTCTAACAGAGTTATTAGAACAATGtaacaaatttattgatattttgggccgtaatatagtttatttagaagaaatgattattgaaattaataaaaatattgaaatttcaaatagAAATGTAACCAAGGCTCttagttgtataaaatttgaaaaaaaatatatatctaaagtTACAATGAaacatatgaaaattaaagcaCACCTagcaaacttttttaaaattggtttattGAATTGTCCACGGAATCCTCATCTTATGGAGTTATATGAAACTGaaagattaatattatcttacaaTGGACGTTTTATATTAGAAGAAtgtgttgaaaaaaatcaatggaaccaagagtttaaaaataaattagaaaaagcAATACATGCTGAAGTATTgaacaaactaaaaattcCTATGCTTGAACAGCATTTGCGTCTTGGTATAGATCGACACAAACAAGTTGATCCaattatgaaacataaaattgaaattgaaatgttaGATCTAGAAAAAGAGttagatattatatctaaaacaCCATTTAAGCAATTAGTGCTTCAGTTTATGGACTCAGATGCAAAGTATGATTGGTTACATATTGCAAAAGAAGTTGATAAACCAGATTTACAATGTCAAAGGTtttggaatttaattttaaaacctcaTATATCTAGAGCTAGATGGACTAAAAGTGAGGATGACCgtttaattgaaattgttgCAAAAAATGAGGAAAAAAATTGGCAAAAAATAGCTGATGAATTAGCTACTAACCGAAATGAGTTGCAATGTTTTGttcattatcaaaaatataagaaaatgttACATACAAAAGGTAAATGGTCAAAACAAGAAGATCTGAaacttatagatataattaaagaaaactccgtggataatatcattaattggCAAAGAGTGTATTTTGCTATGCAAGATAATAAGAGAACTGTTGATCAAATCTATATCAGATGGATGCAAAGTTTGAAACCAGGCATTAAGAAAGGGTTTCTAACTGAGAgtgaaaaatttattattaaagaagctaaaatcaaaaatttaccCCCATCAATAGTATCAATGAATCTAACTAATCGAACACCTGCGCAAGTTCGTAATGCTTATCGtagaattgtattatatgatgAAGACATTTATAGAGGTGGTTGGACAATTGAAGaagataaaatgttaataattgctGTTAATTCCTATGCACCTAATGAATTTACTTGGACACAAGTATCTCAACAGGTGCCTGGGCGTAATGCAGAACAATGTCGTCATAGattcaaattaattgaaaaaaaattaaaacttaacccAAAATTGACTGTTGAAGACATTCCACGCCCGATCCGATCTTATAGATCCAAATTATCCTTTTTTCCAGAAGATGAATTAAATGGAGATTTACAggaaaaatttaaacacaatCGCAAATTGCTTAAAACATCTAATATACCGTTGGAAACAAATGCTGATCGCAAGTTAAAGAAAGCATACTTGGAAAATAAGTTTGTTATTAACAATTGCAATTTGTCTAGTAAATGTGATCTCTACAGGCATGTACTTGATTACTTGGGAGCTAATTTGGTTGTACCTAAAACTTTTGCCCATAAAGATGATTTGATTGATGATGGACTTATGAGTATGATGGCTTATATATCAGAAGAGTGTCCCATTAATACAATGCCATTAAATCCCAGTAATGTTGAGCATGATTTGTATGAACCACTATTAACCCACGAAGGAGTTCACAATGTTTTAAGAACAAGTGATATTATCAATTCTGATCTAAGTGAAATAGAAGGTTTATTAGACATTAGAATAaggaatttttcaaaataa
- Protein Sequence
- MDACGNPIPGSSKEFINIETAESAYDFTWLENELNNGDANEDLRTPKSIVKSLNKNDSFKFEQIETNPNIQDFFEEINCIDFNQDIVQSNYTLTELLEQCNKFIDILGRNIVYLEEMIIEINKNIEISNRNVTKALSCIKFEKKYISKVTMKHMKIKAHLANFFKIGLLNCPRNPHLMELYETERLILSYNGRFILEECVEKNQWNQEFKNKLEKAIHAEVLNKLKIPMLEQHLRLGIDRHKQVDPIMKHKIEIEMLDLEKELDIISKTPFKQLVLQFMDSDAKYDWLHIAKEVDKPDLQCQRFWNLILKPHISRARWTKSEDDRLIEIVAKNEEKNWQKIADELATNRNELQCFVHYQKYKKMLHTKGKWSKQEDLKLIDIIKENSVDNIINWQRVYFAMQDNKRTVDQIYIRWMQSLKPGIKKGFLTESEKFIIKEAKIKNLPPSIVSMNLTNRTPAQVRNAYRRIVLYDEDIYRGGWTIEEDKMLIIAVNSYAPNEFTWTQVSQQVPGRNAEQCRHRFKLIEKKLKLNPKLTVEDIPRPIRSYRSKLSFFPEDELNGDLQEKFKHNRKLLKTSNIPLETNADRKLKKAYLENKFVINNCNLSSKCDLYRHVLDYLGANLVVPKTFAHKDDLIDDGLMSMMAYISEECPINTMPLNPSNVEHDLYEPLLTHEGVHNVLRTSDIINSDLSEIEGLLDIRIRNFSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00972975;
- 90% Identity
- iTF_01328561; iTF_01305481;
- 80% Identity
- -