Rmai005309.1
Basic Information
- Insect
- Rhopalosiphum maidis
- Gene Symbol
- Kdm5
- Assembly
- GCA_003676215.3
- Location
- NC:13675416-13679556[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-22 3.1e-19 68.6 0.0 2 88 114 196 113 197 0.93
Sequence Information
- Coding Sequence
- atgagtgTAAAAAGAGATATAAAGTGTAAACTTGAAATTGATGAACCAAAACAAAAAGAATGTCCTGAAGGAAAATTTATTGATCCTGTCAGTCTTATGGAAAAAGGCAAGTTTGTTTTCAAGGTTCCACCAGAAGCTCCAGTTTTTGAACCTACAGCAGAAGAATTTAAAGATCCATTGAAATATATTGCTAAAATTAGAAGTGTAGCACAAGAACAtggaatttgtaaaattagacCTCCTTCTAATTGGCATCCTCCATTTTGTGTTGATGttgataactttaaatttacacCAAGGATTCAAAAACTAAATGAACTAGATGCAAGTACTAGAGTTAAACTCAATTTCTTGGAAAAAATTGCCAAGTATTGGCATTTACAGGGGATCCGTATTAAAATACCAGTATTAGAACAAAGGGCTGTAGATTTGTATTctctttataaaattgtagaaTTTGAAGGAGGTTTTGATGAAGTATGTGCGGAAAAAAAATGGGGAAAAGTTGCTAGTCGTATGGGTTATGTCTGTGAAAAATCTTCTGGTGCAGTGTTAAAAAGTCATCATGAAAGGTGGCTTAATCCATTTTCACTTTTTCATGCTACCATTAAAGatgaaatttataacaaaccaATTAAAAGAGAGAGTAAAGTTCCAAAtataaaagaagaaaattCTTCTGTTTCAAATTCACCTACTAAAAGAGCTAGACTTAGCCCTGATGACAATAATGAATCTGATGATTATATTAAGGATCCATTTTATCTAATggaaaataaagaattaagaaaattacaattttttggtGCTGGTCCTAAAATGGCCGGATTTAGCTCCAAGTGTAGAATAGGACATTTAAAGTCAAAAGAATCTAAGAAGTCTAAAAGAAGAAGTAAACCTGCTGTAGATTAtttggataaatattattgtcaaaaatGTGGAAGTGGCAAATCTGaagaaactattttaatttgtgatgGATGTGATTTAAGTTTCCACATGCAATGTTTAATCATACCATTAACTACTGTTCCAAAGGGTGAATGGAGATGtcataaatgtgtaattaacGAAGTGATCAAACCTAGTGATGCTTTTGGATTTGAACAAGCTCAGCGAGAATACACACTTCAACAATTTGGAGAAATGGCAGAccaatttaaatctaaatactttaatatgcCAGTTCATCTTGTGCCTACAGACAAAGTTGAACAGGAGTATTGGAAAATTGTTTCATCTATTGATTCCACAGTAATAGCAGAATATGGTGCTGATTTACATACTATGGATCATGGGTCAGGATTCCCTACAGGTCTTGCGCTTAGTGGAAATGAAgataatactttttacaaaTCATACATAGAAGATCattggaatttaaataatataccaatactTAAAGACTCTGttcttagttttattaatgctGATATATCTGGTATGAAAATTCCATGGATGTATGTTGGCATGtgtttttcaacattttgcTGGCATAATGAAGATCATTGGAGCTACTCAATCAACTATTTACATTGGGGTGAACCAAAAACGTGGTATGGAGTTCCAGGAGCCTCTGCTGAAGCTTTTGAAGAAGTTATGAAGGAGACAACACCAGAATTATTTCATTCACAGCCAGATCTCTTGCATCAGTTGGTTACTATTCTGAATCCAAATATATTGATGAAAGCAAATGTCCCAATCTATCGAACTGATCAGAATGCTGGAGAATTTGTTGTTACTTTTCCAAGATCTTACCATACTGGATTCAATCAAGGGTATAATTTTGCCGAAGCTGTGAATTTTGCTCCTGCTGATTGGATTTCAATAGGTCGTGAATGTGTTAATCATTATTCCTCTCTCAAACGAATATGTGTATTTTCCCATGATGAACTTATATGTAAAATGGTGAACTCTTGTGATGACTTGACACAAAAAGCAGCTGAACTTgtgtataatgatttaaatgaaatgGTGAAGTTTGAAAAAGTTCAACGTAAAGCACTTTTAGATTGGGGTGTTACTGAAGCGGATTTTGTTGAATTTGAACATCAAGTAGATGACCTTAGACAATGTATGGTTTGTAATACCACTTTGTATGTGTCTGCTGTATCTTGTTCATGTGATCCAAAAAGACTAGCATGTCTTCGGCATTTTAAACAACTTTGTGATTGTCCTGCACAAATGCACGTGTTCAAATACAGGTATACCCTTGATGAGTTTCCATCTTTATTGCGAAAGGTTAAAGCTAAAGCTGAACAAGCTTATGatgattga
- Protein Sequence
- MSVKRDIKCKLEIDEPKQKECPEGKFIDPVSLMEKGKFVFKVPPEAPVFEPTAEEFKDPLKYIAKIRSVAQEHGICKIRPPSNWHPPFCVDVDNFKFTPRIQKLNELDASTRVKLNFLEKIAKYWHLQGIRIKIPVLEQRAVDLYSLYKIVEFEGGFDEVCAEKKWGKVASRMGYVCEKSSGAVLKSHHERWLNPFSLFHATIKDEIYNKPIKRESKVPNIKEENSSVSNSPTKRARLSPDDNNESDDYIKDPFYLMENKELRKLQFFGAGPKMAGFSSKCRIGHLKSKESKKSKRRSKPAVDYLDKYYCQKCGSGKSEETILICDGCDLSFHMQCLIIPLTTVPKGEWRCHKCVINEVIKPSDAFGFEQAQREYTLQQFGEMADQFKSKYFNMPVHLVPTDKVEQEYWKIVSSIDSTVIAEYGADLHTMDHGSGFPTGLALSGNEDNTFYKSYIEDHWNLNNIPILKDSVLSFINADISGMKIPWMYVGMCFSTFCWHNEDHWSYSINYLHWGEPKTWYGVPGASAEAFEEVMKETTPELFHSQPDLLHQLVTILNPNILMKANVPIYRTDQNAGEFVVTFPRSYHTGFNQGYNFAEAVNFAPADWISIGRECVNHYSSLKRICVFSHDELICKMVNSCDDLTQKAAELVYNDLNEMVKFEKVQRKALLDWGVTEADFVEFEHQVDDLRQCMVCNTTLYVSAVSCSCDPKRLACLRHFKQLCDCPAQMHVFKYRYTLDEFPSLLRKVKAKAEQAYDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00811749;
- 90% Identity
- iTF_01330355;
- 80% Identity
- -