Rmai007911.1
Basic Information
- Insect
- Rhopalosiphum maidis
- Gene Symbol
- -
- Assembly
- GCA_003676215.3
- Location
- NC:10808468-10813733[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.88 4.9e+02 0.2 0.3 33 49 404 420 399 421 0.75 2 2 1.6e-07 9.1e-05 21.8 16.5 2 51 417 466 413 472 0.86
Sequence Information
- Coding Sequence
- ATGgcatactattactattaccaAACACCACCCGACCCATTATCACCTGTACCAACCACAGAAGAAATATCACCACCACAGCCTCCTTTATTAATGCTATCATCTCCACAGCAACAACAGCAGTTAAATATACCACTTCTCAGACCAGTTATTCCATCGGTTACAACATCAATGTCAATGATGACAACGACTACTACTAGTTCTACAGAGCATAATGAACAGCAGCAGCTACCCACTCCAAATACATTCATTAGGCATTGTGATGATATGGGTTTATTTCACGATTTACAAAACATTGTAGTAATGTCTTCGTTAACTGGACCAACAGGTGATACAACTATTAGTACAGCCTCTACATCTAATGCTGCTACGGTAATCACCACGGCAACATCAACTGGACAACCTACTTCTTCAAATTTATTTGACTCATCGTCGACAGCAATTGTGACAACCATGATGATGGCTAATCCATTTGACGAAACATTTAAACAAGCTGTAttgcaacaacaacaaaatgaAGCTAATCCATCAGAAAATCTTTTCAATCACAATGATAACAATGATGGTGATTTAAACACCCCATTCATAGCGACAACTACTGTTGTTAACACATCCAATAACAATACTActGTAAAAACTTCCACAACGATAGATATGATTTCTACAACAACTGCATCAGTTGAATCTAATAAGATGAATACAACTACTGTACCTCAATCTCAAGTAGAACctcaacaaaatgtttatatcacGTCAACAGCAGAAgtgcCAACTAGAAGTGTCTTAGTTATGATGGTGGAGCATCCACAGCAACAATTACGCAACTCAACTCTCCCTATACAACCTGAACATCACCCACACCAACAATTAATCGATCAGCATAAATTCATTGTTCCAACAACTACAACCACAACTAGTGTTAATGACTCAACAACAATAACACACCATGATCAAGATTTTTATGATGAAGAAATTGATGTTGATAATGGCCGTGTAATCATTAATGTCAATAATGattcaaatacaattaaacagACTCTTAAACAGAATCTATTAGTAAAGCAACTGCTACAGAGGCACCAGAAGCCTCCATTCATTACTGAAAGCCGTGACAAACTCGGTCAACTATTGCAACAGCAGAATAAAGACATTGATATTGTCACAAATATCGATAGAATAGAACatgaaaactataatagtaatggCCAGGAAGATGAAGACTGCAATAGTCGAAAGCAGCAGTTAAAACAGAAACGAAAACAAGAAATGTTAGAAAGAAACAGGTCAGCCGCGAAACGGTGTAGAATAAAGCGAAAACAAAGATGGGAGCTAATTTCTGAAGAAAATCGGAAACTGAAAATCGAAAATAGTCGTTTGCGTGAAGCTCTTTCAAAACTTGTAAGCCACAGATGCAGTAACTTACAACAACATCAAATAGAACAGCCAGAGATAATACAAGGAATATTCAAACACAATGatgatgtttaa
- Protein Sequence
- MAYYYYYQTPPDPLSPVPTTEEISPPQPPLLMLSSPQQQQQLNIPLLRPVIPSVTTSMSMMTTTTTSSTEHNEQQQLPTPNTFIRHCDDMGLFHDLQNIVVMSSLTGPTGDTTISTASTSNAATVITTATSTGQPTSSNLFDSSSTAIVTTMMMANPFDETFKQAVLQQQQNEANPSENLFNHNDNNDGDLNTPFIATTTVVNTSNNNTTVKTSTTIDMISTTTASVESNKMNTTTVPQSQVEPQQNVYITSTAEVPTRSVLVMMVEHPQQQLRNSTLPIQPEHHPHQQLIDQHKFIVPTTTTTTSVNDSTTITHHDQDFYDEEIDVDNGRVIINVNNDSNTIKQTLKQNLLVKQLLQRHQKPPFITESRDKLGQLLQQQNKDIDIVTNIDRIEHENYNSNGQEDEDCNSRKQQLKQKRKQEMLERNRSAAKRCRIKRKQRWELISEENRKLKIENSRLREALSKLVSHRCSNLQQHQIEQPEIIQGIFKHNDDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00135071;
- 90% Identity
- iTF_01328367;
- 80% Identity
- -