Rmai007406.1
Basic Information
- Insect
- Rhopalosiphum maidis
- Gene Symbol
- Nfil3
- Assembly
- GCA_003676215.3
- Location
- NC:3468472-3485172[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-13 6.5e-11 41.5 1.2 1 52 133 184 133 191 0.92 2 2 0.00039 0.22 11.0 0.0 38 63 583 608 577 610 0.86
Sequence Information
- Coding Sequence
- ATGGTAGCGGACACGGCTAGCAGTTATCATCATCAACAGAAAACTCAGCCACAGCAACCAAACCAACATCAgcaacaacagcaacaacacCACCACCAGCAACAACAGCAGAAAATCCACcaacagcagcaacagcaactTCACCAAATCCATCTGCAACGtcaacaacagcaacagcagcatCAAAACAGTGGCGGAGCCATGCCGCAATATTGTAGCGACATGGAACAGTCGGGTGGTCCAGGGAGCATGAGGTACGATGATTCGGTATCACCCGGACCGGAATCGCCAGGCCCTGGTGAGCCATACCCACCTGGGTTCGACCTGACGGCGCACCTGCAGCACAAGGAGTTCTTTGCGCAGCGTAAGCAACGTGAATTCATACCGGATAACAAGAAGGATGAAAGCTACTGGGACCGGAGGCGACGAAACAACGAGGCGGCCAAGCGGTCCCGCGAAAAGAGGCGGTTCAACGACATGATCCTCGAACAACGGGTGGTCGAACTGAGCAAGGAGAATCACGTGCTCAAGGCTCAACTCTCTGCCATCAAGGACAAGTTCGGTATCAGTGGCGAAGCCGTGGTCAGCGTTGAACAGGTTATGGCTTCTCTGCCGACAAACGAACAAGTGTTGAGCATCACTAAACGCCCGAAACTGTCCACATCGTCGTCGTCCTCGTCGGTGGGTTACTCTCAGAACGGGTCAGGTCCCATACCCACGTCGGTCATCCACCAACCCGTCCAGTCAACCACGCCCAAAATGAACGGCTCGTACTACGGCGGCGCACAGTCCGACTGCGGCAGTCCCGTCGACCAACACCAACTCcaacagcagcaacagcagcagcaacagcaacaacagcaGGGCGACCGTTCGAACGGTCTGCCGATGTCCGTGGCCGCCGCAGCCGTGGCCGCCGCGGCCCAAGCCGGGTACCCGCCGTACCCGTTCGCGCCCGTCCTGCCACCACTGCAGCCGCCGTCGTTCGAAGCGGCCGCCAACAGCGTGCTGAACCTCAGCCGCCGGCCGCCGTCACCGTACGAGCTGAGCAGCGGCAGTGGCGACGACACTTCGTCGTCTTGCGTGCCCATATCTCTGGCGTTCGTGGCCGCGGCCGCGGCAGCAGCCGCTGGCGGAGTGGTCGGCCCGAACGGCGCGTTGGTCGGTAACAACGGCAACGgcaacaacagcaacaaccACCACCATCAGCACCGGCACCGGCACCACTTCAACGGAAACGGCATGATGGCCATGATGGCCAACGGCGGCGGAGGCGTACCGATCGCTGTCCTCAACGGCAACGGCGGCAACGACAGCAACGGCGGCATCATCGGCGCCGTGAACGGCAACAACATCGCGGCGATCGtcaacggcggcggcggcggcggtggcaaCGGCGGCGGCAACTGTCTGCCGCACAAGCTCCGCCACAAGACGCACTTGGGCGACAAGGACGTGGCGGCCACGGCGCTGCTGTCGCTGCAGGCCATCAAGCAGGAACCGGGCAGCAGCCGGGCCAGTCCGCCGTGGGACGCGGAGGGCAGCAGCGACGAGCGCGACTCGGGCATCAGTTTGGGCGTCGAATGGGGCGTCCGGCCGTCGTCCGCCTCGGTGGCCGCCGCGTGCCCGACCGCCGCCTCGGTGGCCGCGCCCCGCGCCGCCGCCATGCAGTCACCGGCCGCCGTCACGATGAGCGGCGAACCGGCCGACGGCGCCGTGCACGCGACCGCACCGACGGCCGCGGCCGCCGCCGACGACACCAGGCTCAAGTCCGAGGTGGCCCGGCTGGCGTCCGAGGTGGCCAGTCTCAAGAACATGCTGTCGTCCAGGAAGTCGGCCACCGCGGCCCCGGCACAGTCCACCACCGTCGCGGTCAACTGA
- Protein Sequence
- MVADTASSYHHQQKTQPQQPNQHQQQQQQHHHQQQQQKIHQQQQQQLHQIHLQRQQQQQQHQNSGGAMPQYCSDMEQSGGPGSMRYDDSVSPGPESPGPGEPYPPGFDLTAHLQHKEFFAQRKQREFIPDNKKDESYWDRRRRNNEAAKRSREKRRFNDMILEQRVVELSKENHVLKAQLSAIKDKFGISGEAVVSVEQVMASLPTNEQVLSITKRPKLSTSSSSSSVGYSQNGSGPIPTSVIHQPVQSTTPKMNGSYYGGAQSDCGSPVDQHQLQQQQQQQQQQQQQGDRSNGLPMSVAAAAVAAAAQAGYPPYPFAPVLPPLQPPSFEAAANSVLNLSRRPPSPYELSSGSGDDTSSSCVPISLAFVAAAAAAAAGGVVGPNGALVGNNGNGNNSNNHHHQHRHRHHFNGNGMMAMMANGGGGVPIAVLNGNGGNDSNGGIIGAVNGNNIAAIVNGGGGGGGNGGGNCLPHKLRHKTHLGDKDVAATALLSLQAIKQEPGSSRASPPWDAEGSSDERDSGISLGVEWGVRPSSASVAAACPTAASVAAPRAAAMQSPAAVTMSGEPADGAVHATAPTAAAAADDTRLKSEVARLASEVASLKNMLSSRKSATAAPAQSTTVAVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00940123;
- 90% Identity
- iTF_00133987;
- 80% Identity
- -