Rmai004522.1
Basic Information
- Insect
- Rhopalosiphum maidis
- Gene Symbol
- ATF6
- Assembly
- GCA_003676215.3
- Location
- NC:23108630-23116864[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-15 1.6e-12 46.6 6.4 3 55 267 319 265 325 0.95
Sequence Information
- Coding Sequence
- aTGTCAATATTAGATCCTAGTGATATTTCTACTTTGCCTTGGTATTATGACGAATTTGgaatgATGGATGTATTAGTTGAACCTAAGGATAAACTCTTTGAGTTTGATGAGCTTAAAATGGAACCATTGTCACCTTGTTTTGgtgatgatataaaatttaatactggAATCAGCGATCTAGATACCGATTATATGATGCAATGGAACATTGAATCATGTTTAgaaaatggtattgaTTTGGAAAACAATTCATTCAAATCATCACCTCCATCATCTCCTTCTTCTAATGGGTCAATGCCAAGTGGTGATTCACAATCATCATTTGATTCAAACCAAatattacCAAGAATATTATCACCAAATATGAGtaatgaaaatacaataatttgtgaTACTAATacagtatttactataaaatctaCGAATGGAAGTAGAACATTACCAAAACTGAAAATATCTCCAACTCCAATTAAACCAAATTTCAATGCAGCTACTAGAACTAAtaacaatttcaaTGTTTCTTCAATGCTGACTGATCAAACTAATCAATCACCagttacaatttcaaaatcatttgcaTCAACTCTTCCACGAAAGATTATACTAACTCCagatcaattttcaaaaattacgaaattgcaaaaacaaaaacaaattgatttgAATATACCAACTGCAATACCATTAGTATCAAGTACATCAGAAGTTAATACTCAATTGACATTGCCAATAGTTGATATTGATTCAGCAAAGTCTAAAAATTCTACTACTACTTTACAATATAATcaattaagtGCAATTAAACGACATCAACGTATGATACGAAATCGAGAAGCAGCAAGCTTATCtcgtaaaaagaaaaaagaatatGTAACATcattagaagaaaaaatatgtatattggaaAAAGAAAATCTggaattgaaaattgAAAATTCAGCATTAAAAGAACGGCTTAAAATTTTCGACAAATTATCTTCAATAACAGATagacctattatcaaaaaagCCAAAAAAGCCACAGCTATATTATCAGTAGTTTTAATGATTTCTTTAAATGTTGTACCTTCAGGGCTTTTCAATGTAAGGCAATTCGATAAATCACAAATGCAAATGAATCTTGgtgaaaattacaatacaaaaaatattgaaaacataaaCTTTCATAGCAGAAATCTATTATGGGTCAATGATTTTGAAGACAGTAATTCGTCGTTGAATGCTACTGAACATTTGATGTGtccaacatttataaatgtatctgAATCAAAAAGaattgatAGTGAACTTCGAAAATGGATAGAACCAAAGAATTTGAAGTTGTtgaatgataatttatcaatgGTTTATGTTGAACCTCCAATTATAAGTACAACTATTGAACATTCCAAAGATAATGAATCCATTGGAAACAAAGACAAAAAAATGGAAAGAACTCACAAAaggaattttaaAAAAAGAAAGCATATTCCATTTAACAATGATTTCATAGAAATATTCGGTCAGTTGAAGTTAGATAGTAAAGAAAGTTTATTTGATTCCATTGAAAGGCAAGATGATACATTCTATGTTGTATCTTTTTCTGgtgatcatttattattaccagCTAGTCATAATGCCTCTAATACTACCCTTCGACCAAAGATGTCACTTGTTTTTCCAACTCTATCATCAAATGGTTCTGATTTTGTCACTATGATTCAAATTGATTGTGCAGTAACTGATACAAAAACATTACATATTCGAGATACTCACTTAAGACATAATaatgagtttaaaaataatgtttcttCAAACTTAAAACAGCACaatgGCCATAGAAACAATATAGCACACAAGCCCTATTTCGTACGACAAAGTTATTCTGGTTCAATGTTTAGCAAAATGAATCATGAACTTCCAAGTTACTAa
- Protein Sequence
- MSILDPSDISTLPWYYDEFGMMDVLVEPKDKLFEFDELKMEPLSPCFGDDIKFNTGISDLDTDYMMQWNIESCLENGIDLENNSFKSSPPSSPSSNGSMPSGDSQSSFDSNQILPRILSPNMSNENTIICDTNTVFTIKSTNGSRTLPKLKISPTPIKPNFNAATRTNNNFNVSSMLTDQTNQSPVTISKSFASTLPRKIILTPDQFSKITKLQKQKQIDLNIPTAIPLVSSTSEVNTQLTLPIVDIDSAKSKNSTTTLQYNQLSAIKRHQRMIRNREAASLSRKKKKEYVTSLEEKICILEKENLELKIENSALKERLKIFDKLSSITDRPIIKKAKKATAILSVVLMISLNVVPSGLFNVRQFDKSQMQMNLGENYNTKNIENINFHSRNLLWVNDFEDSNSSLNATEHLMCPTFINVSESKRIDSELRKWIEPKNLKLLNDNLSMVYVEPPIISTTIEHSKDNESIGNKDKKMERTHKRNFKKRKHIPFNNDFIEIFGQLKLDSKESLFDSIERQDDTFYVVSFSGDHLLLPASHNASNTTLRPKMSLVFPTLSSNGSDFVTMIQIDCAVTDTKTLHIRDTHLRHNNEFKNNVSSNLKQHNGHRNNIAHKPYFVRQSYSGSMFSKMNHELPSY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01304603;
- 90% Identity
- iTF_01304603;
- 80% Identity
- -