Rchl010165.2
Basic Information
- Insect
- Rhogogaster chlorosoma
- Gene Symbol
- Zfy1
- Assembly
- GCA_944452905.1
- Location
- CALYCC010000047.1:390693-397461[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.0031 0.48 11.9 5.4 1 23 174 197 174 197 0.97 2 18 0.0078 1.2 10.7 1.2 2 23 213 234 212 235 0.95 3 18 5.6 8.7e+02 1.7 3.7 1 23 241 263 241 263 0.97 4 18 0.036 5.5 8.6 0.5 2 23 269 290 268 290 0.97 5 18 1.7 2.7e+02 3.3 1.7 6 23 555 572 553 573 0.87 6 18 0.0022 0.34 12.4 0.8 2 21 584 603 583 604 0.93 7 18 6.5 1e+03 1.5 0.6 2 23 864 885 863 885 0.93 8 18 0.22 34 6.1 0.1 3 23 902 922 900 922 0.96 9 18 0.043 6.6 8.3 0.3 1 23 930 952 930 952 0.98 10 18 0.62 95 4.7 1.0 2 23 1049 1070 1048 1070 0.93 11 18 1.4 2.1e+02 3.6 1.7 3 23 1082 1102 1080 1102 0.87 12 18 0.0033 0.51 11.8 0.2 1 23 1179 1201 1179 1201 0.98 13 18 0.037 5.7 8.5 0.3 1 23 1273 1295 1273 1295 0.97 14 18 4.7e-05 0.0073 17.6 0.5 1 23 1301 1323 1301 1323 0.97 15 18 0.0055 0.84 11.1 2.6 1 23 1376 1398 1376 1398 0.97 16 18 0.0015 0.23 12.9 1.7 1 23 1404 1426 1404 1426 0.99 17 18 1.1 1.7e+02 3.9 0.1 2 23 1522 1543 1521 1543 0.97 18 18 6.4 9.8e+02 1.5 0.2 3 23 1552 1572 1551 1572 0.79
Sequence Information
- Coding Sequence
- ATGGCCGACTCGCTGCCCCGTTTACGAGCACTACGTCCTCGACCTCAACCACAGGCACCCCCGACCGCGGTCGTTAATCCTGTGATAGAATTAAATCAGGAGGAAATCGCCGAGGACGAagacgagccgatggaacaggaacaggaacagggacagggacaagaacaagaagataacgacgaggacgggaggggcagaagaagagacgacgttgttcaacgggccgatattagcgacgacgaagtaacggtaatggccgacgaaggcgaagacgaagacgaggatgacgcgcaccctgacgacgacgatgatgaacacgaacccgaagaggaagaggacgacgattatgaggaggggaaattGGTCATCAAAGAAGAGCCGGTCGAAACACCGGCAATCGAGAGGGAGGAGGAGGCGAAAATTTACGAATGTAACACCTGCAAACCTCCCAAAGAATTACTCACCCTCAAGAGCTACCTTCATCATTTAAAAAAAGAACACAAACAAAGGGTGAGGTGCTACGAGTGTCCGCATTGCGATTTCGTATGCCAACACGCGAAGAAGTTACAGCGTCATTTTCGCGTAGCTCACGAAGATCTACAGGACAAAATAGCGACGGAATCGGCTGAGAGAAGTAGATGTCCTATGTGCGCACATGTAGCCGCTAATCAACGCGATTTGGAGACTCATCAACGAGTTCATCACCTGAAGAGGCGATTTTTTCGATGCGCTAAATGCTCCTATGTCACACACGTCAGGGCGAGATATACGAAACACGTGAAATATCATTCCATGCCTATGATCAAGTGCGATGCTTGCGATTTCCGGACTCCTTACAAGTGGAATTTGGATCGGCATACCAGAAACCACGGGGGAGGTGGAGCCTTTCAATGTCGAGCGTGCAATTTCACAGCCGACATCAGACAGAGCCTCACAGTTCATGAGATGAATCATCACGATCCACCCGTCGGACAGCCCCATAGAAAACCCAACAATCCTTGCGAGAGAAAGCCGAGGAATAGCCCGAAGCGATATAATCAGGTTGGAGCGAGTGATTTTCGAGAAAACACTCCAAAGTCATCGGCAAATACTACACCAGTCAAGTCAGGGAGTCCGAGCAAGGCTTCTACTCCGAGAAAATCACTGACCCCGGACAAAAGGGATCTCCGTGATGAGAGGAGCAGCGTTATAGCCAGCGCCGAATGCATAGCTTTAAAATGTGAAGAAAAAGGCTGCCAATTCATCACCGCGTGGGACTCGGAGATGCAACGGCACCTCGCTGAATCCCATGCCCCTCTGCTCATCAGCAAACCCAGGAAACCTTTGCCTATGCTTATACCGCTGGGGACAACCAGTTCTCCCAAGCCGAATAGCATTGGCGGTGGTGGCAGAGGCAACGCTACACTTCTGAGAGTCCCGAGGGTCCGGGTCAGGCCGGAGTTGGCCCAGATTGCAAGGGATACAGAGATGGCGAGATTGTACGGAGACCAAGAGAATTTAGCTACCAAGAGGGAGTTGAGTGGTAGCGGGGACTCGTTTGAAAAGAAGAACGCTTCGTTCTTTGACAAGTTGAAGGAACGGTTGATGACTAGTACCTCGAATAACGGAGGAAGATTGGACGCTGTTAGCGGGAGCACGGGTCCTATAGATTTGAAATGCTGGTGTACTTTCGAAGCCAAGAACCAGGAGGAGTTGTCTAGCCATCGACGGACCCATCACGCCGCTCTTAGCGTGTCCCTGGGCTCCTCTAGATGCCCCAAGTGCCGTAGGCGGTGCAAAAGCTCGGCCGATCTTCAGGCGCATGTACAAATCTGCCAATCCGGTGTCGAGGAGACTTCTGTTAACGATAATTCACAAATTTACATAGAAGATCGTCCCACGGCTTATCGCGGGGAATATACGTTCCCTTTCCAAGTGGACTGGGACTCAAGTTTTGCAGGACTCAATTCTTCAGGCTCGTCGGTGGAGAGCGGCTCGACGCAGCAGAGCGGTCGCAGAGTATTCAAATGCCCTCATTGCGCTTTCTGGGCTTCTACCGCGTCTCGTTTTCACGTCCACATCGTCGGTCATTTGAATCGCAAACCGTTCGAATGCTCCTTGTGTTCTTATCGATCGAACTGGCGATGGGACATCACCAAACACATTAAACTCAAAGCAGCCAGAGATCCCGCGCACGCATCCGCTCGGGTTCTCATGACGGATGAAACTGGACGGCGAAATTATTCCAAATATAACAAATACCTTGCTCAGGTGCAGCAGCAACAGTTGCAGCTTTCCGACGAGCACGGGCTGGACGAACCACCGTCGAAAATAATTCTGACTGATGATTCTGAGTATAGACATCCTCCGGAATTAACGCCGGCACCTAGTCCCTCATCGATGGGTCTCAGTTCGTCGATGGAAGTCTCTTCTCTGCCATCGAGACCCCCGCCACCACTTAAAGCAGCAAATCGTGGCCAAGGACAATCTTTGCTAAAGACTAGTCCGGTCTCATTATCTACCTCTACCGCATCTGTGACAATATCTGTACCTCTTACCACTGCCAATACCGGAACCAATAATTCGGAAGAAGCTAAACGAACGTTATGGAAATGTAAAAGATGTAATTACAGAGATTCTAGCAAAGAAGCAGTCTTGCTACACGTCAAATCTCACTACGAAGCATCTGTACAGACCTCGGAAAATGAAAAGAAAGTTTTCGGCTGCGGAGATTGTCCGTTCGCAGCATCCACTGCTGCTTCACTCGCTGCTCATCGTTTACATCATCGACCGAACCTAGGAGCAATATTCAAGTGTTATCTCTGCCCGTTTTATGTCAGCACCAAAGTGGAGCTATTGGAACACGCTAGACTTCACGGTGAAGAATTGGCTGCCGAACATCAGCGCAATGTAGAAACCGAAAATCTCCCAGGCAAACGGAAGTATCAACGTATATTACCCGCCAGCAAAAATAAGGCCGAGGATGCTCCCGTTGAGGAAATAGTTCGCGTACCTTCAGTCTCAGCTTCTAATCCAACATCTCCAAGACCAAAGGCACCGATTACTGGCGGCGTGCCTCCTCCCCTGCTATTGGATACTCGAGCTCTTCCCGACGCTCCGTTAGTCTGGGTCTCTCGTCCCGATGGCAGCCTCTCGAAAATGTTGAAATGTCGACATTGTCCCCATGTCGCTTCTCGCCGAGCCGAGGTTCGGGACCACGAAGGAATGCACGTCTCTCCACCGACTCAGGGGATTCTGATCAACTGTACCGACTGTAATTTCACCTGCACCCGTCGAGACGTTATGGATTCTCATAACGCGATGCATTCCGGAGTTTTAGGCACCGTCCATTGCCTCGTCGACGAAGGCCGACCTGATAATCAACAGCTGAACGATTTGGCCACACTTCTCGGACTGCCTCAGCCACCTGTGCTTGGCTCCGAACCAGACCTACGAGATTCTAGACTTGTACATTGCTGCGGTAAATGTCCGGCGAGATTTTTATGCGAAAAAGAACTCAGGATACACCTGCGATACCATTCTACAGAACTCGCGTATTCCTGCCAGTGGTGTTCTTACGCTGCGAGACAACCCGCCCATCTTCTCGCTCATCAGAAAGCTCACTCTCCAGAATACCAGGAGCGGACTCGGTACCTTCTCTCATTGTACGGACACTCTCAACGACATCCTCCGCCTACTACTGCCTGCGTTGAAGCCAACAATCATTCTTCGTCTGCGGCTGGGATTGGAGGGGTTGCATGGATCGTTGTAGAGATTAATTCGGGGCCTGGAACTCATCCAAGCAGTGTTGGCAATCAGGATAATGGAAATCAGGTCTTTACTTGCGCCAAATGTCCCGCGAGGTATTTTAAACTTGATGCTTTGGAGTACCACATGACTTTACACGGGACAAACAACAGGTTTAAATGCTCAGAGTGTGATTATTCTTCTAAGACTGCGCAGAACTTGGCCAAGCATCAAGTCGTTCATCGACGGCATGCTGAAACCAATGAAACTACGACTACAGCTACTGTTCCTAGCCGGTTGCCGCCTCCACCTGACCCCCAATTCGGTATACTTATGCGCGGTAATCCAAACTTTGTTTATCCAGGATATTTGAGGAACGGACGTCTCAAGGAGAAACGATATAAATGTCACAAGTGCCCGTCTGCTTTTGAAAAACGCGAACAATACAGGGTGCATCTTACTCTGCACGGAGCAAAGCAGAGATACCGATGCGACACTTGCGACTATTCTGTTAAATACTATGCAAATTACGTTCAACATCTGAAAAAACATCAGGCCAACGCAGAGGCTCAGGCTTCTAAACGGCAGTACGAAGACGACGCGATTTCAATAGACAGCGACGTGACTACTGAGCAAAGCGCTGTGTTGGTATCCAGACCGGGTAAATCTCTGTCAAAATCATCGACGGCTGCTTCTACAGCGGCTAATAATAACAACGGTAATCCTGCGCTTGGCTCGACGGGAATCGCCGTTTCTAATCAAGATAAACAGTCGCTGATGCTTATGCAGAGGAAAGGCGGCTTGCCAGGCGCCACGGAACTTGACGAGGAGTCGATACGATGTCAGAGCTGTCCGTTTGGGACTCCTGATAAAGAGGCGATGGATGCTCACAAGAGGAGACACGGTATTGAGAGAATGACGCCGCCTTGTCCACACTGTGATTACGTACCGCGAAAGGATGAAAATGCCAGCGAACATGTCAGGCTGCATTTCACGAGACTTTACAAGCCGGAATCTTATCTTATTGCCGAATTATTGGCTCTGCGTGTTCATCCTTTGAACAAGACTAAGATTGGGAGACAGGAAAAGACCAGTGATGAGAATGACGAACTTCTTTTTAAGGAATGTGTCGACGGAAGGTTTCTTCCTGCGCTAGACGCTAACCCTTTAGCACACGCTTCGACCTCTGCTTCTTCTCTGGCTAATCAAGAGAAAGTCATTGTTGATCCTAATACTGGCGAGGCTAGGCATACCCTTGCAACTTAG
- Protein Sequence
- MADSLPRLRALRPRPQPQAPPTAVVNPVIELNQEEIAEDEDEPMEQEQEQGQGQEQEDNDEDGRGRRRDDVVQRADISDDEVTVMADEGEDEDEDDAHPDDDDDEHEPEEEEDDDYEEGKLVIKEEPVETPAIEREEEAKIYECNTCKPPKELLTLKSYLHHLKKEHKQRVRCYECPHCDFVCQHAKKLQRHFRVAHEDLQDKIATESAERSRCPMCAHVAANQRDLETHQRVHHLKRRFFRCAKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGGGAFQCRACNFTADIRQSLTVHEMNHHDPPVGQPHRKPNNPCERKPRNSPKRYNQVGASDFRENTPKSSANTTPVKSGSPSKASTPRKSLTPDKRDLRDERSSVIASAECIALKCEEKGCQFITAWDSEMQRHLAESHAPLLISKPRKPLPMLIPLGTTSSPKPNSIGGGGRGNATLLRVPRVRVRPELAQIARDTEMARLYGDQENLATKRELSGSGDSFEKKNASFFDKLKERLMTSTSNNGGRLDAVSGSTGPIDLKCWCTFEAKNQEELSSHRRTHHAALSVSLGSSRCPKCRRRCKSSADLQAHVQICQSGVEETSVNDNSQIYIEDRPTAYRGEYTFPFQVDWDSSFAGLNSSGSSVESGSTQQSGRRVFKCPHCAFWASTASRFHVHIVGHLNRKPFECSLCSYRSNWRWDITKHIKLKAARDPAHASARVLMTDETGRRNYSKYNKYLAQVQQQQLQLSDEHGLDEPPSKIILTDDSEYRHPPELTPAPSPSSMGLSSSMEVSSLPSRPPPPLKAANRGQGQSLLKTSPVSLSTSTASVTISVPLTTANTGTNNSEEAKRTLWKCKRCNYRDSSKEAVLLHVKSHYEASVQTSENEKKVFGCGDCPFAASTAASLAAHRLHHRPNLGAIFKCYLCPFYVSTKVELLEHARLHGEELAAEHQRNVETENLPGKRKYQRILPASKNKAEDAPVEEIVRVPSVSASNPTSPRPKAPITGGVPPPLLLDTRALPDAPLVWVSRPDGSLSKMLKCRHCPHVASRRAEVRDHEGMHVSPPTQGILINCTDCNFTCTRRDVMDSHNAMHSGVLGTVHCLVDEGRPDNQQLNDLATLLGLPQPPVLGSEPDLRDSRLVHCCGKCPARFLCEKELRIHLRYHSTELAYSCQWCSYAARQPAHLLAHQKAHSPEYQERTRYLLSLYGHSQRHPPPTTACVEANNHSSSAAGIGGVAWIVVEINSGPGTHPSSVGNQDNGNQVFTCAKCPARYFKLDALEYHMTLHGTNNRFKCSECDYSSKTAQNLAKHQVVHRRHAETNETTTTATVPSRLPPPPDPQFGILMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYVQHLKKHQANAEAQASKRQYEDDAISIDSDVTTEQSAVLVSRPGKSLSKSSTAASTAANNNNGNPALGSTGIAVSNQDKQSLMLMQRKGGLPGATELDEESIRCQSCPFGTPDKEAMDAHKRRHGIERMTPPCPHCDYVPRKDENASEHVRLHFTRLYKPESYLIAELLALRVHPLNKTKIGRQEKTSDENDELLFKECVDGRFLPALDANPLAHASTSASSLANQEKVIVDPNTGEARHTLAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00060728;
- 90% Identity
- iTF_01413797;
- 80% Identity
- -