Basic Information

Insect: Rhogogaster chlorosoma
Gene Symbol: Zbtb41
Assembly: GCA_944452905.1
Location: CALYCC010000188.1:196769-199722[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.9 3e+02 3.1 0.1 2 13 163 174 162 185 0.80

2 14 0.072 11 7.6 0.6 2 23 190 212 189 212 0.91

3 14 0.071 11 7.6 0.3 2 23 266 287 265 287 0.95

4 14 0.00038 0.058 14.8 0.2 1 21 325 345 325 346 0.94

5 14 0.16 25 6.5 7.2 1 23 355 377 355 377 0.96

6 14 0.0014 0.21 13.0 1.9 1 23 390 412 390 412 0.98

7 14 0.00018 0.027 15.8 1.8 1 23 420 443 420 443 0.95

8 14 2.5e-06 0.00038 21.7 2.0 1 23 449 471 449 471 0.98

9 14 0.002 0.3 12.5 0.7 1 23 474 497 474 497 0.96

10 14 0.0024 0.37 12.3 0.3 1 23 516 538 516 538 0.98

11 14 0.00012 0.018 16.4 0.9 1 23 544 566 544 566 0.98

12 14 1.4e-06 0.00022 22.4 4.8 1 23 571 593 571 593 0.97

13 14 8.4e-05 0.013 16.9 5.7 1 23 601 623 601 623 0.98

14 14 0.00016 0.024 16.0 0.8 1 23 629 651 629 651 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.9	3e+02	3.1	0.1	2	13	163	174	162	185	0.80
2	14	0.072	11	7.6	0.6	2	23	190	212	189	212	0.91
3	14	0.071	11	7.6	0.3	2	23	266	287	265	287	0.95
4	14	0.00038	0.058	14.8	0.2	1	21	325	345	325	346	0.94
5	14	0.16	25	6.5	7.2	1	23	355	377	355	377	0.96
6	14	0.0014	0.21	13.0	1.9	1	23	390	412	390	412	0.98
7	14	0.00018	0.027	15.8	1.8	1	23	420	443	420	443	0.95
8	14	2.5e-06	0.00038	21.7	2.0	1	23	449	471	449	471	0.98
9	14	0.002	0.3	12.5	0.7	1	23	474	497	474	497	0.96
10	14	0.0024	0.37	12.3	0.3	1	23	516	538	516	538	0.98
11	14	0.00012	0.018	16.4	0.9	1	23	544	566	544	566	0.98
12	14	1.4e-06	0.00022	22.4	4.8	1	23	571	593	571	593	0.97
13	14	8.4e-05	0.013	16.9	5.7	1	23	601	623	601	623	0.98
14	14	0.00016	0.024	16.0	0.8	1	23	629	651	629	651	0.98

Sequence Information

Coding Sequence: ATGGATGCAGAAGTTTTAGAACAAAATCATATTCCAACTAAGGCAAGCGACTGTTTGAAGAATCGAGCAGGCGATGGTAGGGCGAATATAGTACCGAAAAAAACAGAAGAAGAAACACCAGAAACGTGCCGTTTATGTGCTGAAATTGGTGTAGGTCATATTCCAATTTTTGCAGAAAACAATTCTGCTGTTGCTGAGAAAATAAGCAGATGTTTACCGATAATTGTATTGTCAACGGATGAGTTACCACTGTTCGTATGTCAGAGATGTTTCTACTTCCTAAACATTAGTTATAAACTAATTGTTAATTCTGTAAAAGCAGATACTCTCCTGAGAGCTAAATTCAAAGAACCGACTGAATCAGATTCTGCAGAATATGAAAGCAGCCCTTGTACCGTAGTCGTACAACTGCCTGTTGAAATAGATAGTAGTCAAGTATCGAAGAAATATATAGAAGAGTTTGACTTGAGCTCAGGTGTTGCTATAAAATGTGATTTATGCGATCAAATATTTGAAGATTTGAACATCTTTGATACTCATGTCGAAGAGGATCATCTTTCGTTATGGCCTTGTAGTTTGTGTGACAATAGCTATAACGAGTCCAAAGATCTTTTAGCACATAAAGAATTGTGCCATTCCGGGCAAATAGTAACTTGTCAGGACTGTGCCAGAGGAGAATTAGCATTGGACCATTCAATAACCGAGCCAAAGATTGATACGACGGATTTATTGGATATTGAAGAAAGAACAGAGATTACAGAATCAGAAGAACCAGTAGCTGATGCCGATGAGATATACTGCAGTGTGTGCAAACTCACTGTTGAAAATTCTGAACTGTTTAGTAAACACAATAATATTCACTTACCAAAAATAGCCAGATGCCGTACGTGCCAAATACGATGTCATTCCATTTATGACTTATTTCTACATAAAAAGGTGGTGCATAACATGTACAGAAAAGTGAATTTGAAATTTATTTGCGATATGTGTGATAGATTTTTTTCAAATACTGCTCAGTGGCAACACCATATCGAAATATCTTGCCCTAGAAGATTTTCTGTTCATGCTTGCAAGTACTGTAAAAGCATCTTCTCAACAAATCACAAACTCACATTTCATCTAAGAAAACATAAAAAGGAAATGTTGGACGATCCTAGTGTAACGGTATATAAATGTGTGGCCTGTCCAAAAGTATTTGTTGATCACCAATTCTATCAGAAACATAGAAATGTACATGATCCAGAATGCTGGGATAAGTTCAAGTGCACTCTATGCAATCGATCTTTCAGAGACAGAGTTAGGTTGAAGGAACACAATCAATCTATTCACGAAGGTGTAAAGCCTTACCAGTGTGATGTTTGCGGTCGCATGTTTCATCGTTCATCTAACATGCGGGCACATAGAGCAAAACATTTCGGTCACAAGTGTTCTCATTGCGAAGAAGTATTTCAGAGTTTACGAGCACTTGCTGATCATGCTCAGGTTGTTCACGATATTGAAATAAATTTTAGAATGCAAGCAAAACGAGATTACAACAACAGCTGCtatgtttgtagattttgtggtaaaactctggccacaaatcagtctgttagtgatcatgaacgtattcacactggcgaaaaaccctacagctgtaacctgtgcgataaaaccttcagAAGTTACACTGCAAGATGGGCTCATGTGCAACGTCATCAAAAGGGAAACTTCATATGTGAACACTGTGGTAAATGTTTCAGTTATAAACAAAACCTGACTACCCACGTACAGATACATGTTCCTGTTgaagagcgtaagcaccaatgtaccaaatgcagtaaacgtttcctgagaaaagcacatcttaatgtacacatgcgaattcacgatggagttcgtccgtataCCTGTGATATCTGCTTATTCAGTTTTACGCAACTTGGTGATATGAGAAGACATCGTGCTAGACATGCGAATGGTGACGTTCGTGTTAGAAAACCGCGTAATAAATCGGGAATAAATTCAAGCAACGAAGACTCTGCTTAG
Protein Sequence: MDAEVLEQNHIPTKASDCLKNRAGDGRANIVPKKTEEETPETCRLCAEIGVGHIPIFAENNSAVAEKISRCLPIIVLSTDELPLFVCQRCFYFLNISYKLIVNSVKADTLLRAKFKEPTESDSAEYESSPCTVVVQLPVEIDSSQVSKKYIEEFDLSSGVAIKCDLCDQIFEDLNIFDTHVEEDHLSLWPCSLCDNSYNESKDLLAHKELCHSGQIVTCQDCARGELALDHSITEPKIDTTDLLDIEERTEITESEEPVADADEIYCSVCKLTVENSELFSKHNNIHLPKIARCRTCQIRCHSIYDLFLHKKVVHNMYRKVNLKFICDMCDRFFSNTAQWQHHIEISCPRRFSVHACKYCKSIFSTNHKLTFHLRKHKKEMLDDPSVTVYKCVACPKVFVDHQFYQKHRNVHDPECWDKFKCTLCNRSFRDRVRLKEHNQSIHEGVKPYQCDVCGRMFHRSSNMRAHRAKHFGHKCSHCEEVFQSLRALADHAQVVHDIEINFRMQAKRDYNNSCYVCRFCGKTLATNQSVSDHERIHTGEKPYSCNLCDKTFRSYTARWAHVQRHQKGNFICEHCGKCFSYKQNLTTHVQIHVPVEERKHQCTKCSKRFLRKAHLNVHMRIHDGVRPYTCDICLFSFTQLGDMRRHRARHANGDVRVRKPRNKSGINSSNEDSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00060582;
90% Identity: iTF_01412583;
80% Identity: -