Rchl000528.1
Basic Information
- Insect
- Rhogogaster chlorosoma
- Gene Symbol
- snpc-4
- Assembly
- GCA_944452905.1
- Location
- CALYCC010000002.1:294517-297285[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.058 1.4e+02 3.7 0.0 14 43 246 280 238 283 0.77 2 5 7e-11 1.7e-07 32.2 0.1 1 45 289 335 289 336 0.97 3 5 5.8e-10 1.4e-06 29.3 0.1 3 44 346 391 344 393 0.96 4 5 7e-10 1.7e-06 29.0 0.0 1 45 399 444 399 445 0.92 5 5 2.3e-12 5.5e-09 36.9 0.3 1 41 449 489 449 490 0.98
Sequence Information
- Coding Sequence
- ATGAGCGAATCAGAGGACGAAGACGTTATCCTCGGCGACATAAAAGCGTTGCAGGCAGTTTTAACCCAGAAACAAACAGCCAGAGTTAAATTAGAGGTGAAATCGGAAGATAGAATTCCGGATGAACCTAACCTATGCGAACCGTCAACATCTAAAACCCGCGATATTTGCTCTCCAACGTTGAATACGGTTGAAAATTTGGAGGATTTAGATGCAGAAGAAAGCGACAATGAATGTTTATCCGAAATCGAAGAAGACGATGATAATATAGAGGATTTATCCGACTCCGAAGCTGCGTTAAATTTGAATAAAAAAATCATCAGTCTTTTATCGACAGCCCAAAATCGGCTTCGTCTATTACTGAAAGAATGCAAAAGACGTCAAGCAATGATAGATCAAAAAATACGTGAAAAAACTTCAGACCCACTGACCAGAACGCTGCTGACAATAGCTGGAATGCCTTATTTTAAAGACAAGCAGCATTTTCCAGCGCCAAAAAACGAAGATGCTAAATTAAAGGCGAGCCGTGGAGAGTTACAGATTATTAAACTGCCTTGTCCTCTGCGGTGGACATTGAAGGATAGAAATATATTATGGAGAGCAATTGCATGGGATGCTACAAACAATTGTCAAGAAGAAGCAAAGAGAGATACTGCAGAGGATCCTCTGAGGCTTGAGCAAGTAGGGCCATACAGGGAGAAAAAATTGCCCGAAGAAATGCTTAGGAATATAAAACATTTGGTTGGTCCGTTAGGAAGCAGGGAATTTGACTGGTTGAAAATAGCGGCGACAGATTTCAACGGAAGACATTCTGCGAACGAGTGCAGGGCGATGTGGAACGTATTTTTACATCCTGATATAAATAAGGGGAAATGGAAAAAGACAGAGGATTTCGAGCTCAAATCACTGGCAGAGGAGTACAACTTTCAAAATTGGGAAGCGGTCGCTAGTAGGTTGGGAACTAACAGAAGTGGATATCAATGCTTTATTAGATTTAATACAAATTTTAAGAACAATATGTTCAGCAGAAGTAGTTCGTGGTCTAAAGAAGAAGACCAGAAACTTACGGACACTGTAAACGCCTTGAGAACTGGGAATTTCATTCCCTGGGGAGAAGTAGCTAAGGTTATGGGAAATAGGAGGAAACAGCAGATTTATATGCGCTGGAATTACAGCCTAGCACCTAACTTGAAAAAGGGTAGATTCACTGAGGAAGAGGATAGGCTGCTGCTTGAAGGAGTTGCCAAGTTTGGCTTTAACTTTACTAAAATTTCTGTCCTCCTACTGCCCCAGAGAAATACCGCCCAGCTAAACGATCACTACAGAACTCTTATGAATGAGAAAAAGAACAAATGGAACTGCGAGGACGACATGAAACTGGTCAAGCTGTTCGATAGGTTTGGAAACAACTGGTCCGCTATTGCGAAGGAATTTTCAAACAAATCTAGAGTGCAAGTCAGACATCGGCATACTGCGATTATACGATATCTAAGCAGAGGCCTTTCTATAAGGACTATACCTAGGTGGGGGATTAAAACTGAAGAGGAAGATACTTCGGAAGATATATTCACCCGCGGAGAACGGATGCTCGATCAGATGAGCGAGATGGCGAGAATGCAGCAGAGGGCAAGGGAGGGGACAAGGAGAGAGCAGATGCCTAAGATAGACCAGGATCTCAGGGATTATTTCAAAGCGATATATCAGTCTTCCTCCAAGCCCGGGAGACACAGGAAATATTACTCTGTTGAAGAGCTTGACGAAATGACTCAGAAGCTTAACGTCATTTTAAATATTTTTAAAGCTGATCTTGACATTCCTGACGATTTAGAGGAGCAAACATTCTTGACGGAGAAGGACAAGCAGCTGCTGACTTCATTGAAAGAATACTCAAGAAGCGAAAGCTTGGAATCCGAGGAACGACCAAAATACATTGAATACGTCAGGCGGAAGATGTTCGGATCTTCAATGCCGGCGACTGGTGAAGTTCGTTTCATACCGCCGTTACCATTCAATGGAAAAGTTCAGACAACTAAGAAAAAAAAACTTGTGGGCATTAATTATTCTCCCAGTGGAGATAAATGTCTCGCCGAAATACCCCAAGAACTTTGTACATCAAAGACAATTGTATCGTTGATCGGCGGTTGGGAAATTGAAGTAGGATTTCAAAATATGGCAAAGATATTTATTCCAAAGACTGAACAGTTCGCAGAAGCTAATACTGGCAACAGAGATAGTTTCATCGAAACTCTTGACCCGAATGCTCCAAGTACTTCCGGGATTGTTAACAATGGAAGTGGGAACTCTGGACAGGAAGTTTTATCAAGCCCACATCAATCATCTCTTCAAATAATCAGAAGTCTGTCTAGATATTATCCGGAAGTTTTGATACCACCAAACTATACAACATTGCTGGGTTTTCGCGGTTTATTATTATCCAAACATATCCTTGAGGCAGAGGGTCCGGGACGAGGAGAATTCGAAGAAGAAGAGGAAAGAGAAGAAGAAGAAGAATGTCCGATAACGCCGGAGGGAGAAAAAGCTTTGGAATTATTCGAGGAACGTCTAGTTAAACTCTTCAAATTTCCTATAGAATTGTCAGAAATAGCACCGCCTCTGTTACACGTATTACAAAATGCAGACTTGGGTGATACTGACGATGACGTTTGCGGTAAGAAGAGAAAAGCAAGTAAAACAAACTCCGAACCAGCAGCTAAGAGAAAAGCAAAATTCGAAAAAGTCAATGTGAAAGAAAATCACGAGGCTCAATAA
- Protein Sequence
- MSESEDEDVILGDIKALQAVLTQKQTARVKLEVKSEDRIPDEPNLCEPSTSKTRDICSPTLNTVENLEDLDAEESDNECLSEIEEDDDNIEDLSDSEAALNLNKKIISLLSTAQNRLRLLLKECKRRQAMIDQKIREKTSDPLTRTLLTIAGMPYFKDKQHFPAPKNEDAKLKASRGELQIIKLPCPLRWTLKDRNILWRAIAWDATNNCQEEAKRDTAEDPLRLEQVGPYREKKLPEEMLRNIKHLVGPLGSREFDWLKIAATDFNGRHSANECRAMWNVFLHPDINKGKWKKTEDFELKSLAEEYNFQNWEAVASRLGTNRSGYQCFIRFNTNFKNNMFSRSSSWSKEEDQKLTDTVNALRTGNFIPWGEVAKVMGNRRKQQIYMRWNYSLAPNLKKGRFTEEEDRLLLEGVAKFGFNFTKISVLLLPQRNTAQLNDHYRTLMNEKKNKWNCEDDMKLVKLFDRFGNNWSAIAKEFSNKSRVQVRHRHTAIIRYLSRGLSIRTIPRWGIKTEEEDTSEDIFTRGERMLDQMSEMARMQQRAREGTRREQMPKIDQDLRDYFKAIYQSSSKPGRHRKYYSVEELDEMTQKLNVILNIFKADLDIPDDLEEQTFLTEKDKQLLTSLKEYSRSESLESEERPKYIEYVRRKMFGSSMPATGEVRFIPPLPFNGKVQTTKKKKLVGINYSPSGDKCLAEIPQELCTSKTIVSLIGGWEIEVGFQNMAKIFIPKTEQFAEANTGNRDSFIETLDPNAPSTSGIVNNGSGNSGQEVLSSPHQSSLQIIRSLSRYYPEVLIPPNYTTLLGFRGLLLSKHILEAEGPGRGEFEEEEEREEEEECPITPEGEKALELFEERLVKLFKFPIELSEIAPPLLHVLQNADLGDTDDDVCGKKRKASKTNSEPAAKRKAKFEKVNVKENHEAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01414102;
- 90% Identity
- -
- 80% Identity
- -