Rchl015354.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Rhogogaster chlorosoma
Gene Symbol
Arid4b
Assembly
GCA_944452905.1
Location
CALYCC010000080.1:1132014-1141245[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-29 9.3e-26 91.0 0.1 1 89 336 423 336 423 0.96

Sequence Information

Coding Sequence
ATGATCGCGAAGCCAGTTTTCAACAGTCTCGTCGGGGCGGGAGGGGGGCACGGGTCTGTGTGTAACGTAGAAGAGTTTCGTGTCGCTAAAGTGGGAGACGATCCGCCGTATCTTTCGGTTGGTACGGAGGTAAGCGCTAAGTACAAAGGTGCGTTTTGCGAGGCGAAAATCCGGAAGGTTGTCAGGTCCGTGAAGTGTCGAGTGACCTATAAACAGGGCTTGGGTACAGCCACTGTGACCGACGACCAGATAAAGGGAAATCTCAGGGTCGGTGGATCAGTCGAAGCCAAACACAATGAGAGAAAGGATTTCGTCGAGGCTACAGTTACCAAAATACAAGACTGCAGCCAGTACACAGTAGTCTTTGACGACGGAGATATCACCACGCTGAGGAGAACCGCTTTGTGTCTTAAAAGCGGGAGGCACTTTGCTGAGAGCGAAACTTTGGACCAGCTGCCGCTCACCCATCCTGAACACTTCGGTAATCCTGTTATCGGTGGAAGACGAGGACGCAGGTCCAGACAAGCTCAAGACGAGAGCAGCGACGATGAAGGAAGTCCTCCGCGGGGTGCGAGAGAGTCGGGATCTGGCTGCGGTGGCAAAGAGCGTGCGGAAACAGAGCCAGAAATTGGTAGAGTGGTTTGCGTGGAACTAGGAGACAAGAAAAAGAAGGACAACTGGTTTCCTGGTCTTGTTGTTGCTCCCACTGCTCAGGATACGGTCAGGATACGAGTGCGGGACGATTATCTGGTTAGATCGTTCAAGGATGCAAGATACTACACAGTACCGAAGAAAGAAGCGACAGAGTTTACCAAAGAATTGGGTAACAAGGTCGAGAATAATGGGCTCAAAATTGCTGTCGAAAAGGCGCTTTTATTCATCGATAAAAACGAGCTGCCTCCTCACTGGGACAGGGATTCTCTATTCGGAAACGCGGACTCTAGCGGGAACAGCGACAGCGACGGAGAACTGGATTCTGACAGTTCGGACGACGAGCCGAGAGAAGAAAAGGATCACTTCGTTGCGCAACTTTATAAATTCATGGATGACAGAGGTACCCCGATAAATAATTGTCCGATGATAGGATCGCAGGACATTGATTTGTACAGACTGTTCAGGGCTGTTTATAAACTTGGGGGATACAACAGAGTCACTAATCAGAATCAGTGGAAGTCCATTACTCGTCGACTCGGATTTCCCATTCAGAGCACGTCTTCGACACAGAATTCTGTCAAGCAACAGTACAAGAAGTTCCTTCATTCTTTCGAAGACTTTTATAGAAAGCTTGGATGCACTATGGTCAATCATCCCCGAGGTAGTACCAGGAAACAGAGGCCTGGACGGAGTCTGATCAGAGACAGGGACAGAAACACACCCGTGCCTCCAGTCCAAATGCTCGTTGCTTCTAAGGCGGAGAAAGAAGAGGATGAGAGGGAAAAGGAGAGAGAGAGAGAAAGGGAGAAGGAGAAAGAGAAAGAGAAAGAGAAGGAGAAAGAGAAGGAGAAGGAAAAGGAAAAGGAGAAGGAAAAGGAGAAGGAGAAGGAAAAAGAAAAGGAAAAAGAAAAGGAGAAGGAAAAAGAGAGGGAAAAGGAAAAGGAAAAGGAGAAAGAAAGGGAGAAAGAGAAGGAAGAGGACGAGAAAAGGGATAAAAAAGAAACCAAGAAGGAGTCTCCCATCAAGGAGGAAGAAGTCCTCAAGATAAAGAAAAAGGAAGATCTCGAAGAGAGCGGAAGCGGCCAGGAGAGCGACGTGAATATAGAAGGCGAGGAAGAGTCCTCGTCTAGCGAGAGGTCCCAGAAATTAACCGCCGCTTCGTCCCTGGCCAAAGCAAAACCTCCTAAGTTGAAAGAGGAGAAGAAAAAGTTGGCCGAGAAGAGAAAGCCGGATTCAAAGAAGCCGGAGAAGAAGGAGGAGAAGATCAAGGAAGAAGAACAGCCCACAGTTACGAGATCAAAGTCCAAGGACGACACCACGAAGGTAAAAACGGCGCCGGCAGAGCCGCGGGAAGTGAAGACCCCCTCGGCTGAAACCGAGAAAAAATTACCCCCGGCTAAACAGCGCCGGCCTACCGAAGAAGAGCTGAAAAAGCGGGGCAGGAAAAGAAAGGAGAGCCTAGAACCGGAGAAAGCTAGAATCGTCGAGGAGATTTCCACCGATCCTGCACCCTCTTATAAAGGAATAGTCGAGCTGGGGGACAGGCTCAAGGTTTACTACGGACCCACACACGAGTCTAAAGTCACTTACGAGGCGAAGGTCATAGACATGGAGAAGGAGGGCGCGGAGCCCGTCTACCTCGTCCATTACACCGGCTGGAACACCAGGTACGATGAGTGGATCAAGGGCTCCAGGATTGCTCAGAACTTTACGCAAACTCAGGGCAGAGTTAAGAGGGGAAAAACCACACCCAGACCTCAGACTCCCAGCACCGCTGGTTCTTCGGGTAATAAAATGACCAAATCGGCGGCTCAGAACAGGAGAAGGGCTCACAGCGTCGCTCCGGCTTCAGGGAGCAGCGGACTCACTGCTTCTATGATTAGCAAGGAGGGAAGCAAGAGGGAAGAGAAGGAGAACAAGGACTCTCAGCCCCCCAGATCCACTACTCCGTCTTCCGTGGCTAGTTCTAGCTCCAGGACCAAGAGTCCTGCCACTCCTGCTGCTAGTAGGCAGACTAGAGTCACTAGGAATACAGATTCTTCTGGTTTGGAGCCGCGGAGGAGAACCAGGCGGATGTCGGGGCACACGGATATTTCCGTTGCTTCGGAGACGGACAGCGATGCTTACGAGTCTGATACCACTGAGCCTGAGCAGGCCAGGACTCGGTCTAGGGGGATGGAGGAGAGGAAGAGAAGCGCGAGACGGCGGGGGGAAGAGGAGGTGAAAATTGAGGAATGCAGCGACGGAGAGGAGGAAAAATACCCCCCTGAAGAGGTCAGGAGGGGCAGAAGGCTGCGGAGAACTCCGGGGAAGAATCAGGCCGTTAAATCCGAGCCGGAAAGCGACGATGATCAACCCAAAGGCCGGGATTTTGATCTCAATCAAATCCGGTCGGAGCTCAAGGGCTTCGAGAAGGCTGTGAAAATCGAGAGCATCAGGGCTGAGAGAGACTCGGATGAAACGAACTCGGAGGATAAGGAAACTGAGAGGGCGGGAGGCTCCGATACACCCGTATCTCCTAAGCAGGATAAGAAGCATGTCGAACCACCGAAACTTGAGCCTGTTGTCGACGCTAAAGGCCCAGAGAGCCAGGAAGATATTTACGAGTTTAAGGAACCCGAGCCTTTCGAATTCGAGGTCAGGAATAAACGGGAAGTCGTCGTCGCCGTACCGTCGGCCAATGAGAAGGAGAAAGTCAAGAAAAGGGTCTTCGATGACGAACCAAAAAGCCCCAAGAAAAAACAAAAGGTTATTCTCACAGGTCAAGCCGCCAAGGATAAGGATAAGGACAAAAGCGAGGGAGAGACGGATGCTAAGAAGAGAATACGCAGATCATTTCCCAAAAGAGTAGAAGAACCAGAGGCAGTTCCGCCATCGGTGAAACCGAGGTCTCAGTCAGCCTGCGAAGATGCTTTTGACAAGCTGTGCGAGTCTCCGTCGTTCAGTCCGTTGAAGCCGGTCCCGGTTTCAGAAGAAGTCGGAAAAGTAGCGACGACTTTAGACCTACTTTTCAGCGATTTACCCGGCGATGAAGACGGCCCTGCGGACGACCCGGAAGATCGACTGATCATCTCAGAGGCCGAAGTATCGGAAGCGGAGCAAGAGAACCTCTTCACTTATCAGCAGGAGATATTCCCGGCCAGCGATATACCGGACACGATGGAATTCAGCAAAGAAGAAACAAAGACTGAGGAGGAATCCAAGACCGAACCGGTGGCTGGAAGCAGCAAACCGACGCCTACGATCTCGGAGCTTAAACAAATCCCGGTCGTCGTTACTGAGCAGAAAACTCTGGATCTTAAACCGGCCGAGATCAGCCCCGCTTTATCCCCGGCTTTGGTGGCTCCGGCGCCGATCAGCGCCCGACTTCCGGCGACCTCGACGATAGAAGAAAAACTGTCCGCGGCTGCCCTGGCGTTTAAGAATAAATCCAAAGACGCGAGGAGGGAGGAGGACGCCGAGCAGAGGAAAGGCAAGGAGGCTTCGAAGAAGGGCGAGACTTCCGTGATAGTTAAGAAGGGGAAGGACGAGATAGCCGCTAAACCGATCGATCCTGATAATGGAAAGAAAGGGGAAGACGAAACGGAGAAAAAGAACGACGAGGAGGAGCGCAGGGAGGCTATGAGAGTCGCGATCAAACAGAAAGAGGAAGAACTTCAGCAGTTGAAAATGAGGAGGGCTGCGGCTACCGCTGCGGCTGTCGTGGCCGAGCAGAAGAAGAGAGAGGAGGAGGCTTCTTCGAGGAAAGAAGAGGTGAAGGAGAGGGAGAAGGAGAGCAAGAGGAAGCGGGTTATAAGCCAGGAGTTCATCGACTCTACTGACAGCAGCGATTCCGAGCAGCGGCTTGTCATCGACAACGAAGATCCACCCGAGGAGAAGAACGCCGCTTCTAATTTCGACATCAAGCTCAGAGCGGAGCTGGAAAAATTGCAGGATATACAGGAGGGGAGGATATCTCAGGCTCAGATGAACTCGGAGGAAATTTCCATCCGGGGTGAATCCAAGCCTGTGATTATACCGATTCTCAGGAACGAGGAGGAGGCGGAGAACATCAACTCGTTACTTTGCGAGGAGGAGATACCCGGCTCCCCAGCACCCGTTGTGGACAGCATCGACCAGGCCAACGTTTCTACTGCTAATCAAATCCCCTCGCAGATCGAAGCCCCGGAAGCTAACATCGTGCTTCTAGAAATGCCGTTTGCCAGCGCTCCGACCTCCGGAGGACAAACTTCCAACGCTGGAACTACTCCAGTTGGGAATACGAGCGCAAGTAAAACCTCGGACGTTTCTGTGCCCGTTTCTCTTCCCGTACAACAAGCCCTGGTTATCGCTGCAAGACCGCAGCCCGTTATGCAGCCTATTCCTCAACCGCAGGCTCAAGCAGCTCCAGTGGCTGCGCAGCGGAGAGAGAGCAACGAGGCAGCCCCAGTGATGGATAACACGCCTCCGACGACCCCGGATTCAACGATATCCAACATATCCGGTTCACCGCGGGGTGACGGAACGGGCGGTTCCTCTCCGCTCTCGGAAGATAACACTAAATCGAACAGAGATAGTTCGGAGGCGGATAATGACTCTGCGAGCAAGGGTCTGGGCGGTGGATTCAGCGAGGACGACGCTAGCCTTACTGCCGCGGATAACGGGGGGCAAGAAAGAGGCCCTAAATCGGGATCGAAAAGGGTCGCGGAAGACTCGCAGTCCCCCAAGAAAAGGAAACGGAGCAGGAAACATTCGGAGTGCGGGAGCAACTTGAGCGGGAAGAAAACTACACCCAGACAAACCGGCGGCAGACAGCATTCTATGCGACATTCGGGGGGGGCTAGCGACAGCGACGATACCAGCGAAAGCTCCAATATTTGTCCCGGAAATTCAAACACCCCGAGTCACACGGTCGTTCCTGGAGTTCCGGACATCGTTTACTCCGCCAGGTCACCGAGGCCTTTGAAATACAACTTTTACGTCGAATTGGACCCTGAGCTCGACGGAAGCCAACGGATCGCCGTACTGCAACAGAAACTCACGGAGCTGAGGAAAACTTACAACGCCGTTAAGGTGGAACTTGCGGGTATCGAGAGGCGCAGAAAAAAGCTTAGGCGAAGAGAGAGAGAAGCACTGAAAGCAGCCAAGGCAGAAATGCAGCAGGCTTGTTCGTGA
Protein Sequence
MIAKPVFNSLVGAGGGHGSVCNVEEFRVAKVGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVTDDQIKGNLRVGGSVEAKHNERKDFVEATVTKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDESSDDEGSPPRGARESGSGCGGKERAETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELGNKVENNGLKIAVEKALLFIDKNELPPHWDRDSLFGNADSSGNSDSDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGSQDIDLYRLFRAVYKLGGYNRVTNQNQWKSITRRLGFPIQSTSSTQNSVKQQYKKFLHSFEDFYRKLGCTMVNHPRGSTRKQRPGRSLIRDRDRNTPVPPVQMLVASKAEKEEDEREKEREREREKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEREKEKEKEKEREKEKEEDEKRDKKETKKESPIKEEEVLKIKKKEDLEESGSGQESDVNIEGEEESSSSERSQKLTAASSLAKAKPPKLKEEKKKLAEKRKPDSKKPEKKEEKIKEEEQPTVTRSKSKDDTTKVKTAPAEPREVKTPSAETEKKLPPAKQRRPTEEELKKRGRKRKESLEPEKARIVEEISTDPAPSYKGIVELGDRLKVYYGPTHESKVTYEAKVIDMEKEGAEPVYLVHYTGWNTRYDEWIKGSRIAQNFTQTQGRVKRGKTTPRPQTPSTAGSSGNKMTKSAAQNRRRAHSVAPASGSSGLTASMISKEGSKREEKENKDSQPPRSTTPSSVASSSSRTKSPATPAASRQTRVTRNTDSSGLEPRRRTRRMSGHTDISVASETDSDAYESDTTEPEQARTRSRGMEERKRSARRRGEEEVKIEECSDGEEEKYPPEEVRRGRRLRRTPGKNQAVKSEPESDDDQPKGRDFDLNQIRSELKGFEKAVKIESIRAERDSDETNSEDKETERAGGSDTPVSPKQDKKHVEPPKLEPVVDAKGPESQEDIYEFKEPEPFEFEVRNKREVVVAVPSANEKEKVKKRVFDDEPKSPKKKQKVILTGQAAKDKDKDKSEGETDAKKRIRRSFPKRVEEPEAVPPSVKPRSQSACEDAFDKLCESPSFSPLKPVPVSEEVGKVATTLDLLFSDLPGDEDGPADDPEDRLIISEAEVSEAEQENLFTYQQEIFPASDIPDTMEFSKEETKTEEESKTEPVAGSSKPTPTISELKQIPVVVTEQKTLDLKPAEISPALSPALVAPAPISARLPATSTIEEKLSAAALAFKNKSKDARREEDAEQRKGKEASKKGETSVIVKKGKDEIAAKPIDPDNGKKGEDETEKKNDEEERREAMRVAIKQKEEELQQLKMRRAAATAAAVVAEQKKREEEASSRKEEVKEREKESKRKRVISQEFIDSTDSSDSEQRLVIDNEDPPEEKNAASNFDIKLRAELEKLQDIQEGRISQAQMNSEEISIRGESKPVIIPILRNEEEAENINSLLCEEEIPGSPAPVVDSIDQANVSTANQIPSQIEAPEANIVLLEMPFASAPTSGGQTSNAGTTPVGNTSASKTSDVSVPVSLPVQQALVIAARPQPVMQPIPQPQAQAAPVAAQRRESNEAAPVMDNTPPTTPDSTISNISGSPRGDGTGGSSPLSEDNTKSNRDSSEADNDSASKGLGGGFSEDDASLTAADNGGQERGPKSGSKRVAEDSQSPKKRKRSRKHSECGSNLSGKKTTPRQTGGRQHSMRHSGGASDSDDTSESSNICPGNSNTPSHTVVPGVPDIVYSARSPRPLKYNFYVELDPELDGSQRIAVLQQKLTELRKTYNAVKVELAGIERRRKKLRRREREALKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00938446;
90% Identity
-
80% Identity
-