Basic Information

Insect: Rhodophaea formosa
Gene Symbol: zfpm1
Assembly: GCA_963082605.1
Location: OY720211.1:2546781-2562947[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.6 3.7e+02 2.8 0.4 2 23 5 26 4 26 0.94

2 14 0.00075 0.061 14.7 0.3 2 23 997 1019 996 1019 0.91

3 14 3.8 3.1e+02 3.0 0.5 1 23 1099 1121 1099 1121 0.94

4 14 1.1e-05 0.00088 20.5 2.2 2 23 1124 1145 1123 1145 0.97

5 14 0.031 2.5 9.6 2.5 1 23 1151 1173 1151 1173 0.97

6 14 0.0095 0.77 11.2 2.5 2 23 1180 1201 1179 1202 0.95

7 14 1.2 1e+02 4.5 0.8 6 23 1216 1233 1214 1233 0.96

8 14 0.024 2 9.9 1.1 3 23 1240 1261 1239 1261 0.96

9 14 0.016 1.3 10.5 0.1 2 23 1278 1298 1277 1298 0.97

10 14 0.0045 0.37 12.2 0.6 3 20 1306 1323 1304 1326 0.85

11 14 0.00091 0.074 14.4 0.6 1 23 1334 1356 1334 1356 0.98

12 14 0.0067 0.54 11.7 7.2 1 23 1362 1384 1362 1384 0.98

13 14 7.8e-06 0.00063 20.9 1.3 1 23 1390 1414 1390 1414 0.98

14 14 0.0012 0.099 14.0 5.1 1 23 1420 1442 1420 1443 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.6	3.7e+02	2.8	0.4	2	23	5	26	4	26	0.94
2	14	0.00075	0.061	14.7	0.3	2	23	997	1019	996	1019	0.91
3	14	3.8	3.1e+02	3.0	0.5	1	23	1099	1121	1099	1121	0.94
4	14	1.1e-05	0.00088	20.5	2.2	2	23	1124	1145	1123	1145	0.97
5	14	0.031	2.5	9.6	2.5	1	23	1151	1173	1151	1173	0.97
6	14	0.0095	0.77	11.2	2.5	2	23	1180	1201	1179	1202	0.95
7	14	1.2	1e+02	4.5	0.8	6	23	1216	1233	1214	1233	0.96
8	14	0.024	2	9.9	1.1	3	23	1240	1261	1239	1261	0.96
9	14	0.016	1.3	10.5	0.1	2	23	1278	1298	1277	1298	0.97
10	14	0.0045	0.37	12.2	0.6	3	20	1306	1323	1304	1326	0.85
11	14	0.00091	0.074	14.4	0.6	1	23	1334	1356	1334	1356	0.98
12	14	0.0067	0.54	11.7	7.2	1	23	1362	1384	1362	1384	0.98
13	14	7.8e-06	0.00063	20.9	1.3	1	23	1390	1414	1390	1414	0.98
14	14	0.0012	0.099	14.0	5.1	1	23	1420	1442	1420	1443	0.95

Sequence Information

Coding Sequence: ATGGATCAGCTACAGTGCCCTGTTTGCACCCTCTATCTCCACAATGGGATGACCTTGGAGTCCCATTTAGACACCCATCCCAAAGATCAGGTCATCAAGGCCTTATGTAATTTTGCTAACAAAGGGAGTGGTTACAGCAGTAGAACATCGACACCGGTACATTCAGAGCGCTCATTTAGAAGCAGATCTAGGACTCCTGCGACAGAGGACAGATGGAATAGCTCCCACCGCAACTCTGAACATGACAGGTACTGGCGAAGAACACCAAGCAGGCCACCTAAGTCCAGTTCAGTCTTGAGCACTTCTAGAAATGCTACACCAATAGGTGACATAAATTTCGATAACAACTCTGCTAGTAATTCTAATTCAAATCAGTATGCTGGAGCTCCATTTCTAATGAAAGCAGATAGAGTGCAACAAAACTATCAGAATATGCCAGTGCCTGAATTTGATCAACAGTATGTATACTTGCAAGATCAGGAAGATAGGGAGGTGAAATATTCCCGGAGTGCAGAGTACAGTGCCCTCAACCGTAATGGTAATGTGTTTTCTAACAACATGCCACCAATGGCCACCGGTCTCAAACTGCAATCTGCTTTGCTGCCTTCAGTTAATAGCAGAGGGACTGACATAGTCAAGATAATGcccaaacaaaataatatacttcTCAAAACAAATATGGGTGGTATGCCATACCTACCGCCAGGAGTGAAGCCAATGCATGTTGTGGTGCCCACTAGTAGGACATTCCTCCACAAGAATGTGCAGAATAACCTGATTATGAGCAATAGTATGTCGGCCGGACAGATGATAGACACCAAGTGCATGACTGGAGCCATCCCCAGTAGTCAGTTCAGCCAATTGCCATCAGGAGCTTTCACACCTGGCACTACTGTTGTCACTCAAAATTCACAAATTATTTATAGAGAAATGGTCCATAACCTTGATGGAAAACCTTTTATTTCAAGTGTACCTGCTGTACTAAGTAGTCACCATGAGAATGTAACAAATGTAGCACAAACTAGTTCCATGTATCAGAATGTGATGGTGGTTGACCAATTTGGGAACACCTCTTGTATGTACTCAACACCTCAGCAAATTATACCAAAGGCAGCATGTAATGCCCCCATGTACAATAGTAGTTCACCCAACATTCATTCTACTCACGTAGATAAGCCAAGTAATGATGCAAATAAAACTCTTATAATAGAAGTTGCCCCCATGGTCTCCAAAGCATCTACTAGTGATACAGTGTCAAGCACAGTAACGGTACCTAAACCAGACGTCAACACTCCTAGCTCTAGTCAGTCTGTCAATGAAAGTGTTCCATCGGTAGAATCTAAAAGTGATTCAGCGGTCACAAGCAAAGGTCTCAAAATTATCAGTAACATTAAGGTTGAAGTGCCCGTGCAGCATCATAAGAATATGCTTAACACAATCATGGACCTCACTGGCTCCAATGACCTAGATTATCCAGAACCATGTGCTTCTCCTGAAAAGATATTGCCAGATTTAGAGGATAACAATCAGGTGTCAGAAGATACACAGCCTTCTACTTCCAGTGCAGATAATTTAGTTCCACACACATTTTCTGTGATAAAAAATGTGGGGAATCCTCCTGCGTACAAAGAGACCTCAAGTAAGTCTGCTGTAGTAGATAGTAAGATTGACACAGAGTTCTCGGATAGTTGTCCAGTTCCTGATTTAATATGTAATGAGAAGCCTTCTGTGTCGCCATGCAGTGAGCTGTCGGAGCAGGGTGATAATTCAACTGATCGCACCTCAATTTCGCCCAAACCTCATAGCAGCCAAAGCTGTAGTAGCATTGTAGCCACTAGTAGTAAACACAGTCAATCGCAGCAGAAGCCATACAGAACTAATACATTAAGACTGAACAACATTTATGTAAAGAAGCACAAGAAGATTTTACAGATTAAGAATGCTAAGCCTTTCCCTGTAAATAAGGCAACACAAGTTGATAAAGAGCCGAAAGCATCATCTTCTAACAGATCACCAGAGCACTACACTATGAATAAATTGCATCAGTCTGAAAGAAATGAAAGTCGAGAGAAACCAAGCACATTGCAGACTGTGTCTGTAGAGCCAATTGTAGAGAAAGAAGAAGACCagaatgatgataatgagtttGATGCTGACACTGAGGAACAGTCAATGGATATAGAGCCTGTGGCGCCCTCTACTTTAAATGCTAATTTCACCACTAGTATAGATGTCGTGCAGGTGAAAGAGGAGATTAATACAAGCAATGAGGAAGGGTTCAGTAATGAGGCTAGTGGGTCTAACCGTTTGACATCTCTGGAGTCACTGCGGCCAATTAACGTGATCACATACTCTCACACTGTTCCAACCGGTGAGTACGACGAAGAGTCAAATCATAGAGAGCTCTTGGAGCTCGAAGCCACTTCAAAGAACAAGCAGTTTGTAAATATGATGAACGAGAATTACTTCGGCGATAACATATACGCGGATTATTTCACGCCAGATCGCGTGGAGTCGTTTGACGCCGCGCGAGGGGAGCCTTCGTTCCCTAAAGAGAATCAGAAGGAAGGTCTTTACATTTGGGGTGAATCTGCCCAGAAGGAGAATGAGTTTGTCCTGCCGAATTTTATCCACGAGAGTTATAAGATAGCGGAGAGTAGCGGGATAGATTATTCGGAGATGGGGGGTCGGGAGGAGAGCGGGGAGCGGGACAGCAAGGCGGACGTGCTGAGCGAGAGCCGCAGCTCGGGCGAGGCGCCACTGAACATCCGCGCGGACGAGCGGATGCCGCCGCGGGGCGAGCTCAGCGGCCAGGAGAGCAATGGGGATATGGAGTCTCCCTGGACTGggATGTATTCAGAGGTGACGCCAGCGGAGCCCTACGACTTAATAGCGCGCGAAAGCTGGGTGTCCGACGGCTCCGAGGTGGACCCTGATGATAAGGGAGACAACCTCGACGAGCTTCGATTTGGGAAGAGCCGTCTCAGTACTTGCACGCAATGTGGTGCCAAATTCTCCTCGCCCAAGGAACTGCGCTCCCACAAGGCGTTAGCGCACGCCCTGCCCACCTGCTCGTCCACCAAGACGTCCTACAGCAGGCTGGTGACGGCCAGGACCATTATCAAGAAGGAGGAAAAGGTTGAAGACGGCTTGTCGACCAGTAACATGCTAGCAACCCTTGACCCAAAGAAATCGATAGCCACAACCATACTCCAAGTGTACGATGTGATGAACGAGGCCAAGCCTAAGATCGAGGGGCTCATCAAGCAGGAGACCAAGCGGCGCAGGAAGGACTATGTATGCCCTACTTGCAAGGAGGACCAGGTGACTGAGCAGGCGTTCCACCTGCACCTGAAGGTACACCCGCTGGAGTGCCTGACGTGCGGCAAGTGCTTCTTCCGGCGCGCCAACCTCGCGCTGCACATGAAGACGCATCTCGGTATCAAGAATTACAAGTGCGAAGTGTGCGAGAAGCGGTTCCTGACGCGGCAGAAGCTGATGGAGCACCACAACGCGCACACGGGGCGCGCGCCCGTCAAGTGCACCGTCTGCGACGACACCTTCCGCCGGTACTCCAACATGGTGCAGCACAGGGACCGACACCACTTCCAGAAGAAGGCCAAAGTCCGCGACTACGTGTGCCGCTGCGGCGCCATCTTCCACTCTCGTGCTAAACTGCAGTGGCACGCCGAGACGCACGACGAGAGACCCAAAGCCTGCCTGTACTGCAGTGATAAATTCGTGCACGCCGCCTCGTTAACACGACACGTCCGCCGGACGCACAACGAGTACTACATGTCGGAGAAACTGCGAGGGAAAGTCGACAACGTGCCGTGTCCTGTTTGTAAACAGGTGTACCTGCGTACGAACCTGCGCGCGCACTTGCTGACGCACAGCGGCAAGCGGCCGTACCTGTGCATCATCTGCAACAAGGCGTTCACCACCAAGTGGAACCTGAAGCTGCACCGCTGGACGCACATGTCGCGCTCCGCCAAGCCCTTCAAGTGCGAGCTCTGCAAGGGCGCCTTCATCCGCCACTCAGAATACATAGCGCACATGAACGCACACAAGGCCGTAAAACCCTACACCTGCAACTACTGCGGCTGCCAGTTCATCCGCAAGTACAACTGCCAGAGACACGTGCGCGAACACGAAATGGCCAAGAAGTACGTCTGCAAGGTCCCCGAGTGCGGTAAGTCGTTCCATAGGAGTTATTACCTGTCTGAACACATGAAAGTTCATAGTGGCGCTAGGCCGTTCTCGTGCAATATATGCGGGAAGACGTCCAGTAATAAGTCTAATCACAACAAGCATGTGAAGATCCACCACGCTCGCGAGCCTGTCGCTACGGAGGCCTAA
Protein Sequence: MDQLQCPVCTLYLHNGMTLESHLDTHPKDQVIKALCNFANKGSGYSSRTSTPVHSERSFRSRSRTPATEDRWNSSHRNSEHDRYWRRTPSRPPKSSSVLSTSRNATPIGDINFDNNSASNSNSNQYAGAPFLMKADRVQQNYQNMPVPEFDQQYVYLQDQEDREVKYSRSAEYSALNRNGNVFSNNMPPMATGLKLQSALLPSVNSRGTDIVKIMPKQNNILLKTNMGGMPYLPPGVKPMHVVVPTSRTFLHKNVQNNLIMSNSMSAGQMIDTKCMTGAIPSSQFSQLPSGAFTPGTTVVTQNSQIIYREMVHNLDGKPFISSVPAVLSSHHENVTNVAQTSSMYQNVMVVDQFGNTSCMYSTPQQIIPKAACNAPMYNSSSPNIHSTHVDKPSNDANKTLIIEVAPMVSKASTSDTVSSTVTVPKPDVNTPSSSQSVNESVPSVESKSDSAVTSKGLKIISNIKVEVPVQHHKNMLNTIMDLTGSNDLDYPEPCASPEKILPDLEDNNQVSEDTQPSTSSADNLVPHTFSVIKNVGNPPAYKETSSKSAVVDSKIDTEFSDSCPVPDLICNEKPSVSPCSELSEQGDNSTDRTSISPKPHSSQSCSSIVATSSKHSQSQQKPYRTNTLRLNNIYVKKHKKILQIKNAKPFPVNKATQVDKEPKASSSNRSPEHYTMNKLHQSERNESREKPSTLQTVSVEPIVEKEEDQNDDNEFDADTEEQSMDIEPVAPSTLNANFTTSIDVVQVKEEINTSNEEGFSNEASGSNRLTSLESLRPINVITYSHTVPTGEYDEESNHRELLELEATSKNKQFVNMMNENYFGDNIYADYFTPDRVESFDAARGEPSFPKENQKEGLYIWGESAQKENEFVLPNFIHESYKIAESSGIDYSEMGGREESGERDSKADVLSESRSSGEAPLNIRADERMPPRGELSGQESNGDMESPWTGMYSEVTPAEPYDLIARESWVSDGSEVDPDDKGDNLDELRFGKSRLSTCTQCGAKFSSPKELRSHKALAHALPTCSSTKTSYSRLVTARTIIKKEEKVEDGLSTSNMLATLDPKKSIATTILQVYDVMNEAKPKIEGLIKQETKRRRKDYVCPTCKEDQVTEQAFHLHLKVHPLECLTCGKCFFRRANLALHMKTHLGIKNYKCEVCEKRFLTRQKLMEHHNAHTGRAPVKCTVCDDTFRRYSNMVQHRDRHHFQKKAKVRDYVCRCGAIFHSRAKLQWHAETHDERPKACLYCSDKFVHAASLTRHVRRTHNEYYMSEKLRGKVDNVPCPVCKQVYLRTNLRAHLLTHSGKRPYLCIICNKAFTTKWNLKLHRWTHMSRSAKPFKCELCKGAFIRHSEYIAHMNAHKAVKPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01220927;
90% Identity: iTF_00640782;
80% Identity: -