Basic Information

Insect: Rhodophaea formosa
Gene Symbol: Zbtb41
Assembly: GCA_963082605.1
Location: OY720213.1:19603751-19607339[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.016 1.3 10.5 5.5 1 23 69 91 69 91 0.98

2 11 0.0026 0.21 13.0 0.1 1 23 112 134 112 134 0.94

3 11 0.019 1.5 10.3 0.1 1 23 246 268 246 268 0.97

4 11 0.00065 0.053 14.9 1.8 1 23 274 296 274 296 0.98

5 11 2.5e-05 0.002 19.3 0.0 1 23 301 323 301 323 0.99

6 11 6.1e-08 5e-06 27.5 0.1 1 23 329 351 329 351 0.99

7 11 1.4e-05 0.0011 20.1 1.7 1 23 357 379 357 379 0.99

8 11 8.1e-06 0.00066 20.9 5.4 1 23 385 407 385 407 0.98

9 11 1.9e-05 0.0016 19.7 0.3 1 21 413 433 413 438 0.93

10 11 0.00039 0.031 15.6 0.5 1 23 441 463 441 463 0.98

11 11 0.021 1.7 10.1 0.3 2 20 472 490 471 490 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.016	1.3	10.5	5.5	1	23	69	91	69	91	0.98
2	11	0.0026	0.21	13.0	0.1	1	23	112	134	112	134	0.94
3	11	0.019	1.5	10.3	0.1	1	23	246	268	246	268	0.97
4	11	0.00065	0.053	14.9	1.8	1	23	274	296	274	296	0.98
5	11	2.5e-05	0.002	19.3	0.0	1	23	301	323	301	323	0.99
6	11	6.1e-08	5e-06	27.5	0.1	1	23	329	351	329	351	0.99
7	11	1.4e-05	0.0011	20.1	1.7	1	23	357	379	357	379	0.99
8	11	8.1e-06	0.00066	20.9	5.4	1	23	385	407	385	407	0.98
9	11	1.9e-05	0.0016	19.7	0.3	1	21	413	433	413	438	0.93
10	11	0.00039	0.031	15.6	0.5	1	23	441	463	441	463	0.98
11	11	0.021	1.7	10.1	0.3	2	20	472	490	471	490	0.92

Sequence Information

Coding Sequence: ATGGAAGAAAAAGTGATAAATTTAGTTCCTAAGTGGTTGAATCCGTATATAAAATTGGACATAATAAATGTGGATAAATATATTTCACCAATAAACCTGCAACAgcaagataatgatgatgtggAAAATCAAAATAGGTCTAATCAAGCTATTGAAGATAATGCGaaaaagtCCCTTCGAGTAGTACTGGAGAGGATCAAGATATATGAATGTAAAACTTGTTACTTTTGCTACACTACAAATCGGGATTACAGACTGCACCTTATTAAGCACGCAAAACCTGATGTGGACAGCAAATTTTCGTATCAAAAATATggtaattatgtaaaaaaattcaaatgtgAGCAATGTGACTTGAGATTTGTCGCAGAAAGTACTCTGGAAGCTCACTCCGTGGTCCACCGTCCCTTTCCACACAAGTGCCACTGCGGCATCGGCTTCTACAAGGAGTGTGACCTTTTAGGCCACAAGAACTTAGTTCATCCCGAAATCAAAGAAAACATCTGGCAACCGAAAACAAAATACGccggtaaaaaaataaaatcggagTTTTGTATCAAATCTGAATATGTTTCTCCCGAAAGCGACGCAATTAAGACTAAATTAGGAGTTTTTAAACCAAAGACGAGATTAAAGGAACAGAAAAAGAAGTCTAAACAGAACCCGAGAAAATTGTATGATGTAAAATTGCCTACGTTATACTGTGAGGGGGTGGAAGTAGACGGAAAAATCAAATATCCATGCCCAACTTGCAATAACTACTATGCTTCTTACGCAGGATTACAAATTCATTTTATGATTCATACAGGAGAGAAACCTTACAAATGTGATATTTGTTCAAAAGGTTTTAATCAGTCCGCGGCACTAGCGTGTCATAAACGTAGACATGCTGGAGTTAAATATGAGTGCCCAGTTTGTGGGAAAAAGGTGGCCCAAAAAGGTGCATTGCCTTTGCACATGCGTACACACACTGGTGAAAAACCTTACGAGTGCGAATTTTGCGGGAAAGCGTTTAGCGACCCGAGTGCATTCGCGAGGCACGTTCGGACCCACACAGGGGACAAAAGATATCAATGTCCTCAATGCCCGATGCGTTTTTCGGACTGCAGCGGGCTGATACAACACAAGCAACGACACACTGGGATAAAACCACATAAATGTGAGATTTGTCATAAGAAATTCTACACGAACTGGGATCTAACGAAACATTTACTAACGCACATGGAGCGATATCCCTACGAATGCAATGACTGTGGAAAACGTTTTCGTTTGAAAAGTTCTTTGTATGGCCATATCACTAGGGCTGGAGTACACTCTGCATTTAGGTGCAAATTGTGTCCGAGGGTGGTCTATACTAAAGACGCGAGAGAACGACATATGAAGGCGCATCAAAAACTTGAGTTGGCTGACTGTGAGTGCGACCTGTGCGGCGAAACTTTTTTCAGTAAAGCGGCGATTGCAAAACATCTGTGGCTAGATCATTTGTAA
Protein Sequence: MEEKVINLVPKWLNPYIKLDIINVDKYISPINLQQQDNDDVENQNRSNQAIEDNAKKSLRVVLERIKIYECKTCYFCYTTNRDYRLHLIKHAKPDVDSKFSYQKYGNYVKKFKCEQCDLRFVAESTLEAHSVVHRPFPHKCHCGIGFYKECDLLGHKNLVHPEIKENIWQPKTKYAGKKIKSEFCIKSEYVSPESDAIKTKLGVFKPKTRLKEQKKKSKQNPRKLYDVKLPTLYCEGVEVDGKIKYPCPTCNNYYASYAGLQIHFMIHTGEKPYKCDICSKGFNQSAALACHKRRHAGVKYECPVCGKKVAQKGALPLHMRTHTGEKPYECEFCGKAFSDPSAFARHVRTHTGDKRYQCPQCPMRFSDCSGLIQHKQRHTGIKPHKCEICHKKFYTNWDLTKHLLTHMERYPYECNDCGKRFRLKSSLYGHITRAGVHSAFRCKLCPRVVYTKDARERHMKAHQKLELADCECDLCGETFFSKAAIAKHLWLDHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -