Rfor023857.1
Basic Information
- Insect
- Rhodophaea formosa
- Gene Symbol
- SNAPC4_1
- Assembly
- GCA_963082605.1
- Location
- OY720225.1:8725882-8728326[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.78 1.2e+03 0.6 0.0 22 33 242 253 210 260 0.82 2 5 4.5e-08 6.9e-05 23.7 0.1 1 45 273 319 273 320 0.90 3 5 5.6e-11 8.6e-08 33.1 0.1 3 44 328 373 326 375 0.94 4 5 1.8e-12 2.8e-09 37.8 0.0 1 43 379 422 379 425 0.96 5 5 3.3e-08 5e-05 24.2 0.0 3 46 432 478 430 478 0.93
Sequence Information
- Coding Sequence
- ATGTCGGACTTCCAAATGGATATTGACATGGACAGCTTTAGCGAAGACTCGGAGGAAGAGGAGCGAGAGATGCAAAAAGTACAAGCTGTCCTTCAAGCTGATGATTATAAGGCTTATCTATATCCCGACAGAACAACTGTCCAAGAAAGTTGTCCTTCAGTATCGAACGTGTCCGTCTCCTCGCAGCCGCCCGATGAACTCTCTAGGATAGACATGGCGCTAGCCCTGAACAAATTCACCGACGAAAAGTTACAAAGATTAGAAATATTACTCAATGTCAGACTTCAAGAATGCAGAGCTAAACTGAAAGCACTACACGAAGCTGAATCTTTCGAAGCACCGCAATCAGACAAACCGCCTCATTTTCGATATGTTTTATGTGGCAAACCTTACTTTAAGGATAAAAACTTTTATCCAGCCCCAAATAATGAAGACACTATTCTGATGATGAAATCTGAAATGTATGACTTTAATTCAATACCTTCTGTCCCTGGCTGGACTGTTAAGGATAAGagtgaatttattaattttattcatacaatgtctcaaaaattaaagataaaagaattaaattctaaaatatCTCAACTTAAGCGAAATGCTACTGTTAAGAAAATGAGTGATGCCAAACTCGAACAGGAAGTCCAGAAACTTCAAAAACAGATAGAATCAGTTaacaaaaaaactttgaaaGAATTAGCTTTGCCAGTGGAGCAGGAGTATGACTGGGACACGATATCCAACAAGCTAAACCAGAGGCACAGTGCCCACGAGTATAGAGCTTTATGGAAATTATTCCTACATCCAtccataaacaaaaataattggtCAAAAAGTGAGCATATTGTTTTGCAAAAAATTGCATATGCAAACAACCTACAAGATTGGGATAAGATTGCTAAGGAATTAAACTCAAATCGAACAGGATATCAGTGTTTTGTGTACTTCAGGACCAACATGAATGATACAACTAATGGCCTTAAATGGTCAAAAGATGAAGAGGAACTTCTTAAAAGACTAGTAGATTTTTACAGAGAAGACAATTATATACCATGGGGTAAAGTAGCAGCATCTATGGAGAATCGTACGAAGGTACAGATATACAACAAGTATATGAGACTGGAAGAGCATCGGAAAGGCCGATTCATTCCTGAGGAAGATGCTGTCATATTAACATGTGTGGATCATTTTGGCACTAACAATTTCAGAAAAATACAGCAATATTTACCTGGACGTTCAGTAGTCCAACTGCGAAACCGCTATCAGGTGTTGACCAAGACCCGAGTATCGTGTGTGTGGTCAGTTGAAGAAGACAAGAAATTAATACAACTCATGGCCAATCAAGATGACAGTGTGGCAAGCTTTGCAAGCATATGTGAACACTTACCTGGAAAAGACCGAAGTCAAACCAGAGCTCGTTATAAAACGTTGTTGAAATGGATGAAGCGGTTCCCAAATACAGACATATCATTAGCTCCTCGCCGTGGCTCGCGTCGTCTTGGTCACGGTAGAGCTGCGAAAGATTTAGATAATGCCCTAGAAAAACTTACagcaaagataaaaaatgaaGTTCAAGAAAAGAAACTGAAAACTGTCACTGAAGCTAGCACAGAACAAGAAATTGATGATGCTATTGTTGCAAATCTGGTAACACAAGAAATGAGAGCAAATAGATATAGATTATCTGAATCAGGGTATCATCAGGAAGAAGATGATTGCGATATCCCAACGTCTCAAGCAGAAAACACAACAAACTTgcaaaaattattaattctattGAGAAGTAAGCTGAACAAGGAACGTTTCATACATAGTGATgattatatgaaatattttgatataaatcaAGTTGTTACAAAGGTTGGTCCCacaggtaaaataaaatgttattcaaGGAAACGAATTGGACCTGCCTTACCGTCAGCATCATCTGAGAATGATCCTGATTTGTGGGGCAATAACAAATTAGGCAATGTAGACTATGTACTGCCACCGCACCTGGCCACTGTAACTGGTTGCAGAAAGATCATGTCATATGTCAATGACCATGCTGATCAatcattaaatatgtatttccagagcaacaagaaaaaatacaaagagCAGTTCAACACCCTAATGGAACGCTTTAACTTATTATTCTTATGGCCTCTTCTACTATCAAATGAAAATCCAGATCATTATTTGCAACTGCTGCAGGAACCACATCCTATACATGTTGCTGCCCAGCCTGAAGCTCTGGAACCACCTCCATTTAAAAAAAGGCAGATAGTACTGCCTCTTCCagaaattaccataccatatgCAAGAGAGGATTGTGAAGAGTCGATAGGCATAGATCTACCAGATGCTAAAGACGATAAGGATAATGAGGAAATAACGctaaacactgattttaatGTTGAGTTTAATGAAGGTGCAAATGATGAGTGTCTGAATGAGTAA
- Protein Sequence
- MSDFQMDIDMDSFSEDSEEEEREMQKVQAVLQADDYKAYLYPDRTTVQESCPSVSNVSVSSQPPDELSRIDMALALNKFTDEKLQRLEILLNVRLQECRAKLKALHEAESFEAPQSDKPPHFRYVLCGKPYFKDKNFYPAPNNEDTILMMKSEMYDFNSIPSVPGWTVKDKSEFINFIHTMSQKLKIKELNSKISQLKRNATVKKMSDAKLEQEVQKLQKQIESVNKKTLKELALPVEQEYDWDTISNKLNQRHSAHEYRALWKLFLHPSINKNNWSKSEHIVLQKIAYANNLQDWDKIAKELNSNRTGYQCFVYFRTNMNDTTNGLKWSKDEEELLKRLVDFYREDNYIPWGKVAASMENRTKVQIYNKYMRLEEHRKGRFIPEEDAVILTCVDHFGTNNFRKIQQYLPGRSVVQLRNRYQVLTKTRVSCVWSVEEDKKLIQLMANQDDSVASFASICEHLPGKDRSQTRARYKTLLKWMKRFPNTDISLAPRRGSRRLGHGRAAKDLDNALEKLTAKIKNEVQEKKLKTVTEASTEQEIDDAIVANLVTQEMRANRYRLSESGYHQEEDDCDIPTSQAENTTNLQKLLILLRSKLNKERFIHSDDYMKYFDINQVVTKVGPTGKIKCYSRKRIGPALPSASSENDPDLWGNNKLGNVDYVLPPHLATVTGCRKIMSYVNDHADQSLNMYFQSNKKKYKEQFNTLMERFNLLFLWPLLLSNENPDHYLQLLQEPHPIHVAAQPEALEPPPFKKRQIVLPLPEITIPYAREDCEESIGIDLPDAKDDKDNEEITLNTDFNVEFNEGANDECLNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00640272;
- 90% Identity
- iTF_00640272;
- 80% Identity
- -