Rfor023999.1
Basic Information
- Insect
- Rhodophaea formosa
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963082605.1
- Location
- OY720225.1:11915827-11943643[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-14 6.2e-12 45.9 0.0 1 38 148 186 148 189 0.94 2 2 3.4e-18 1.4e-15 57.6 0.0 1 43 355 398 355 400 0.95
Sequence Information
- Coding Sequence
- ATGCAGATAGACAGTCCGGCGTCAGAATCGGACAGCAGCTCGGTGTCGGGCGCTAAGAGCCCGGCTGGTGCGCCGCCGCTGCTGCACCATCTCCTGCAGATGCAACTGCAGGCGCAGAGCAGTCCTCACACCATCGCGCAGTTCCAGCAAATGGTGGCGGCGCTGGCGACGCTGGGCTCCGGGCTGATGCCGCCCGCGCTCACACAGGTGATGCTGATGCAGCGGCTGGCGCAGAATCGACAGCAGGCTGACAGACTACCAGATACGGGGGAAAAAGCACCGACGCCGTCATCTCCGACGCTTGCAGAACAGCCTCTGGATTTGAGCGCTAAGTCTACCTCCAGCACCAGTGGTACACCACCGCCGGACTCCAAGATCTTGGACAATAGGTTGAAACGCGCCGCGATCGAAAGCGCCGGCAACAGCCAACGCCGCGCCTACTCCGAGGAGGAGCTCCAGCTCGCCCTGCGCGACATCCAGTCCGGCCGCCTCGGCACCCGGCGCGCCGCCACCGTCTACGGCATCCCCCGCTCCACGCTCCGCAACAAAGTCAACAAGTTCGGCCTCAACCCCGACCAGCACGACTCCGAACCCGACAGCGACCCCGAAAGACCCGAATCCCCACCATCCGTCATCCTCAAAATACCAACCTTCCCACCCCCTGACGAAAACAGCCCCTCACCAGCTACATCTGTCACTACACCCGTCACACCTTGCACCCCGATGATCCCACCACCCCAACCCCCAGTGAATCCCCCAACACATCTGCCAGCCTTTTTCGCCGATCCGCCAAACCAGCATCTCTTCACATCGATCAACGATGTCATAGTACGGAGCATCAGCCAGAAGTTCCAACAGCTCCCTGATAGACCGCCGCAGGCCAGCGATCTACAGCAGTTCATGAGAGCACCGGAAAGGCACATCTCCGTTATCAAAACCCCTCCGGAGAACCAAAGGAACTATCCGGCTCCAAGCAATTCTAGAGGCCAGACTAATAATAACGGCCAACCCGCGACTGGAGGCAAAGGAACGCGTCCCAAACGAGGGAAGTATCGAAACTACGACAGGGATAGCCTCGTCGAAGCCGTAAAAGCGGTGCAACGGGGAGAGATGTCCGTACACAGAGCTGGCTCTTACTACGGCGTGCCGCATTCCACCCTAGAATACAAGGTGAAGGAGCGGCATCTCATGCGGCCGCGAAAGCGTGAACCTAAACCGCAACAGGACGTGAAGCCGCAGCCGCCGAAGCCTCAGCCACCGAAGCCGCCAACGAAGCCCTTCTCCAACGGCCTAAATGGACCGGAGACGTCCGGGTACCCAACGAGCTACCCGTTCTGGCCAAACGCTGGTTTCCCACCGCCATCGCCCGATCTCTACGCTTCGCACATGATGCGGCGGCTACGCGAGGAAGCGCCTCCGCCAGCGAACGGATCGTTCCTGGAAGGGATCATTAGGTCGAGCCTTGAGCGACCACGTGCAGCGCTTCTGCAGCAGCTGACGGCTGAACCACGGCCTCCGATGCCGTCATCAGAAGCACCAAGCTTGCTTCGGAGACTAGCAGGCTCGCCTGCTGACGACGGGCCTCCGGCTCGGCGTCCACGGATGGACAACGCAGATTTAGCGGCGGACATCCGTGAGACGGTGCAGCGGCTGCGCGCAGACAAGCTGCGGCCGCGCAACGGCACGCCCACGCCGCCCGGCGCCGCGTCGTCGCCGCCGCACGCCGCGCCGCCGCACGCCACGCCGcacgccgcgccgcccgccgcgccgcccgaCCGCGCCTAG
- Protein Sequence
- MQIDSPASESDSSSVSGAKSPAGAPPLLHHLLQMQLQAQSSPHTIAQFQQMVAALATLGSGLMPPALTQVMLMQRLAQNRQQADRLPDTGEKAPTPSSPTLAEQPLDLSAKSTSSTSGTPPPDSKILDNRLKRAAIESAGNSQRRAYSEEELQLALRDIQSGRLGTRRAATVYGIPRSTLRNKVNKFGLNPDQHDSEPDSDPERPESPPSVILKIPTFPPPDENSPSPATSVTTPVTPCTPMIPPPQPPVNPPTHLPAFFADPPNQHLFTSINDVIVRSISQKFQQLPDRPPQASDLQQFMRAPERHISVIKTPPENQRNYPAPSNSRGQTNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDVKPQPPKPQPPKPPTKPFSNGLNGPETSGYPTSYPFWPNAGFPPPSPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPRAALLQQLTAEPRPPMPSSEAPSLLRRLAGSPADDGPPARRPRMDNADLAADIRETVQRLRADKLRPRNGTPTPPGAASSPPHAAPPHATPHAAPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00651652;
- 90% Identity
- iTF_00011864;
- 80% Identity
- -