Rfor007524.2
Basic Information
- Insect
- Rhodophaea formosa
- Gene Symbol
- xbp-1
- Assembly
- GCA_963082605.1
- Location
- OY720209.1:3883704-3885588[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.6e-17 2.9e-14 53.7 12.2 2 63 44 105 44 107 0.94 2 3 0.001 1.1 10.1 0.5 33 54 89 110 89 114 0.91 3 3 5.6 6.2e+03 -1.8 0.1 22 48 139 166 136 183 0.66
Sequence Information
- Coding Sequence
- ATGAGCGCCCCTATCATCATTACCGTGCCTAACAACTACCTGGCGGTGGAGGAGATGGACTCCAACGTGGTCGTGGACGTGTCACCGTCTCCACCGTCCAGGAAGCGGCGCCTGGATCATCTGACATGGGAGGAGAAGATGCAAAGAAAGAAACTGAAGAACCGAGTGGCGGCGCAAACATCGCGCGACAGGAAAAAGGCTAAAATGGACGAAATGGAACACCGCTTGAAACAATTTATGGACATGAATGAAAGGTTGGCGAGCGAGGTTGCAAGCTTGAAGGCGCTGAACGAGCGTCTTCTGAGCGAGAACGCAGCGCTACGCAGCGAGTCGGCGGCGCGGAGCGTCGCGGGGGCCCAAGGACCGGCAGAGTCTCCTCAGCAGAAGGAAGGGCCCCCGCCGGCGGTCCGGGCGGCGCGGCTGCTGCTGGCGATGTGCCTGCTCTCACAGACCTCCTCGCTCACCTCGACTCAGAAGAGTACCTTGACAGCCTCCATCAACTTGCAGACTCCTTACTACAAGAAATTAGCGCAAGTGCTTCAGGAGCGGTTGAAGATGTCTCAGTCCGGGAATCTGGAGAGCGTCCTAAAGGAGCTCAAGTGGATACTGTCCCAGCACTCATATGCGCATCCCTACACTCCAGACATCGTAGTCACCGCACCTAAAGAAACCGTACAAATAGAAGAAAGTGGAAATGACAAAGGAGACATGTTCTACGCCAGTTTTGATGAAGACAATGATTGTGTCACTATCGAAGTGCCATGTGAGGAGCAGGTTGTTGAAGAAATTACTCCTATCAAAGTTGAGACAGACTTTACGTTGACATCGGACTTAAAATCGGACTTTGATCTGAAGATGGTGTCTCCGATGACTCTATCACCAAACTCAATGGATGATAACCTACTCCTGTCACCGTCACACACAAGCCTTAGTTCAGATCTCGGTTATGAATCATTATCATCTCCTCTCAGTGAGCATGATGCTATGGACTTGTCAGACTTTTGGTGTGAATCATTCTCAGAACTGTTCCCTGACCTAGTATAG
- Protein Sequence
- MSAPIIITVPNNYLAVEEMDSNVVVDVSPSPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEHRLKQFMDMNERLASEVASLKALNERLLSENAALRSESAARSVAGAQGPAESPQQKEGPPPAVRAARLLLAMCLLSQTSSLTSTQKSTLTASINLQTPYYKKLAQVLQERLKMSQSGNLESVLKELKWILSQHSYAHPYTPDIVVTAPKETVQIEESGNDKGDMFYASFDEDNDCVTIEVPCEEQVVEEITPIKVETDFTLTSDLKSDFDLKMVSPMTLSPNSMDDNLLLSPSHTSLSSDLGYESLSSPLSEHDAMDLSDFWCESFSELFPDLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01220394;
- 90% Identity
- iTF_01220394;
- 80% Identity
- -